RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 ANKS4BQ8N8V4 417 aa7□□□□□ -1.29
USH2A-203ENST00000463147 MARCH10Q8NA82 808 aaPredicted RBP7□□□□□ -1.29
USH2A-203ENST00000463147 SP110Q9HB58 689 aa7□□□□□ -1.29
USH2A-203ENST00000463147 TJP2Q9UDY2 1190 aa7□□□□□ -1.29
USH2A-203ENST00000463147 GNEQ9Y223 722 aaKnown RBP7□□□□□ -1.29
USH2A-203ENST00000463147 KCTD3Q9Y597 815 aa7□□□□□ -1.29
USH2A-203ENST00000463147 MYOCOSA0A1B0GUC4 107 aa6.99□□□□□ -1.29
USH2A-203ENST00000463147 SASH1O94885 1247 aa6.99□□□□□ -1.29
USH2A-203ENST00000463147 PDE6BP35913 854 aa6.99□□□□□ -1.29
USH2A-203ENST00000463147 FMR1Q06787 632 aaKnown RBP eCLIP6.99□□□□□ -1.29
USH2A-203ENST00000463147 CXorf38Q8TB03 319 aa6.99□□□□□ -1.29
USH2A-203ENST00000463147 Q96M66 194 aa6.99□□□□□ -1.29
USH2A-203ENST00000463147 RTEL1Q9NZ71 1219 aa6.99□□□□□ -1.29
USH2A-203ENST00000463147 DNAJB8Q8NHS0 232 aa6.98□□□□□ -1.29
USH2A-203ENST00000463147 C19orf44Q9H6X5 657 aa6.98□□□□□ -1.29
USH2A-203ENST00000463147 A0A0G2JLL6 359 aaPredicted RBP6.97□□□□□ -1.29
USH2A-203ENST00000463147 HRKO00198 91 aa6.97□□□□□ -1.29
USH2A-203ENST00000463147 RBM25P49756 843 aaKnown RBP6.97□□□□□ -1.29
USH2A-203ENST00000463147 OR14I1A6ND48 311 aa6.96□□□□□ -1.3
USH2A-203ENST00000463147 PATL2C9JE40 543 aaKnown RBP6.96□□□□□ -1.3
USH2A-203ENST00000463147 DTWD2Q8NBA8 298 aa6.96□□□□□ -1.3
USH2A-203ENST00000463147 PPP1R13LQ8WUF5 828 aa6.96□□□□□ -1.3
USH2A-203ENST00000463147 MIR1-1HGQ9H1L0 117 aa6.96□□□□□ -1.3
USH2A-203ENST00000463147 GPR160Q9UJ42 338 aa6.96□□□□□ -1.3
USH2A-203ENST00000463147 RLBP1P12271 317 aa6.95□□□□□ -1.3
USH2A-203ENST00000463147 CDK8P49336 464 aa6.95□□□□□ -1.3
USH2A-203ENST00000463147 YARSP54577 528 aaKnown RBP6.95□□□□□ -1.3
USH2A-203ENST00000463147 TSNAXIP1Q2TAA8 658 aa6.95□□□□□ -1.3
USH2A-203ENST00000463147 OLFML2BQ68BL8 750 aa6.95□□□□□ -1.3
USH2A-203ENST00000463147 SND1Q7KZF4 910 aaKnown RBP eCLIP6.95□□□□□ -1.3
USH2A-203ENST00000463147 CYB5D2Q8WUJ1 264 aa6.95□□□□□ -1.3
USH2A-203ENST00000463147 RNF141Q8WVD5 230 aa6.95□□□□□ -1.3
USH2A-203ENST00000463147 SIGLEC10Q96LC7 697 aa6.95□□□□□ -1.3
USH2A-203ENST00000463147 DPH2Q9BQC3 489 aaPredicted RBP6.95□□□□□ -1.3
USH2A-203ENST00000463147 GCM1Q9NP62 436 aa6.95□□□□□ -1.3
USH2A-203ENST00000463147 PCDHA11Q9Y5I1 949 aa6.95□□□□□ -1.3
USH2A-203ENST00000463147 WASH4PA8MWX3 477 aa6.94□□□□□ -1.3
USH2A-203ENST00000463147 RPL6Q02878 288 aaKnown RBP6.94□□□□□ -1.3
USH2A-203ENST00000463147 CCDC85BQ15834 202 aaPredicted RBP6.94□□□□□ -1.3
USH2A-203ENST00000463147 AGMOQ6ZNB7 445 aa6.94□□□□□ -1.3
USH2A-203ENST00000463147 ASB16Q96NS5 453 aa6.94□□□□□ -1.3
USH2A-203ENST00000463147 IRAK3Q9Y616 596 aa6.94□□□□□ -1.3
USH2A-203ENST00000463147 TIGD5Q53EQ6 642 aa6.93□□□□□ -1.3
USH2A-203ENST00000463147 TRIM13O60858 407 aa6.92□□□□□ -1.3
USH2A-203ENST00000463147 EIF4BP23588 611 aaKnown RBP6.92□□□□□ -1.3
USH2A-203ENST00000463147 SEPT6Q14141 434 aa6.92□□□□□ -1.3
USH2A-203ENST00000463147 CCDC27Q2M243 656 aa6.92□□□□□ -1.3
USH2A-203ENST00000463147 ACSF2Q96CM8 615 aaPredicted RBP6.92□□□□□ -1.3
USH2A-203ENST00000463147 ASPNQ9BXN1 380 aa6.92□□□□□ -1.3
USH2A-203ENST00000463147 CRTAC1Q9NQ79 661 aa6.92□□□□□ -1.3
USH2A-203ENST00000463147 SIRT5Q9NXA8 310 aa6.92□□□□□ -1.3
USH2A-203ENST00000463147 RBM47A0AV96 593 aaKnown RBP6.91□□□□□ -1.3
USH2A-203ENST00000463147 ABLIM1O14639 778 aa6.91□□□□□ -1.3
USH2A-203ENST00000463147 CELA3BP08861 270 aa6.91□□□□□ -1.3
USH2A-203ENST00000463147 SP8Q8IXZ3 490 aa6.91□□□□□ -1.3
USH2A-203ENST00000463147 ENOX1Q8TC92 643 aaKnown RBP6.91□□□□□ -1.3
USH2A-203ENST00000463147 LINC01599Q8WXQ3 324 aa6.91□□□□□ -1.3
USH2A-203ENST00000463147 ASCC2Q9H1I8 757 aaPredicted RBP6.91□□□□□ -1.3
USH2A-203ENST00000463147 PCDHB5Q9Y5E4 795 aa6.91□□□□□ -1.3
USH2A-203ENST00000463147 ADAMTS20P59510 1910 aa6.9□□□□□ -1.3
USH2A-203ENST00000463147 LIG3P49916 1009 aa6.9□□□□□ -1.3
USH2A-203ENST00000463147 AFF3P51826 1226 aaKnown RBP6.9□□□□□ -1.3
USH2A-203ENST00000463147 TEKQ02763 1124 aa6.9□□□□□ -1.3
USH2A-203ENST00000463147 CLEC16AQ2KHT3 1053 aa6.9□□□□□ -1.3
USH2A-203ENST00000463147 RNF111Q6ZNA4 994 aa6.9□□□□□ -1.3
USH2A-203ENST00000463147 PRRT2Q7Z6L0 340 aaPredicted RBP6.9□□□□□ -1.3
USH2A-203ENST00000463147 CCDC84Q86UT8 332 aaPredicted RBP6.9□□□□□ -1.3
USH2A-203ENST00000463147 FAM13CQ8NE31 585 aa6.9□□□□□ -1.3
USH2A-203ENST00000463147 SGPP1Q9BX95 441 aa6.9□□□□□ -1.3
USH2A-203ENST00000463147 XYLT2Q9H1B5 865 aa6.9□□□□□ -1.3
USH2A-203ENST00000463147 WWC3Q9ULE0 1092 aa6.9□□□□□ -1.3
USH2A-203ENST00000463147 PSPNO60542 156 aa6.89□□□□□ -1.31
USH2A-203ENST00000463147 GNA15P30679 374 aa6.89□□□□□ -1.31
USH2A-203ENST00000463147 KIR2DL1P43626 348 aaPredicted RBP6.89□□□□□ -1.31
USH2A-203ENST00000463147 KIR2DL2P43627 348 aaPredicted RBP6.89□□□□□ -1.31
USH2A-203ENST00000463147 SRSF3P84103 164 aaKnown RBP6.89□□□□□ -1.31
USH2A-203ENST00000463147 SSPNQ14714 243 aa6.89□□□□□ -1.31
USH2A-203ENST00000463147 TMEM201Q5SNT2 666 aa6.89□□□□□ -1.31
USH2A-203ENST00000463147 ADGRF1Q5T601 910 aa6.89□□□□□ -1.31
USH2A-203ENST00000463147 SLFN12Q8IYM2 578 aa6.89□□□□□ -1.31
USH2A-203ENST00000463147 DACT3Q96B18 629 aaPredicted RBP6.89□□□□□ -1.31
USH2A-203ENST00000463147 SHISA4Q96DD7 197 aa6.89□□□□□ -1.31
USH2A-203ENST00000463147 MBD1Q9UIS9 605 aaPredicted RBP6.89□□□□□ -1.31
USH2A-203ENST00000463147 UNCXA6NJT0 531 aa6.88□□□□□ -1.31
USH2A-203ENST00000463147 N4BP3O15049 544 aa6.88□□□□□ -1.31
USH2A-203ENST00000463147 ADRB1P08588 477 aa6.88□□□□□ -1.31
USH2A-203ENST00000463147 PLCG1P19174 1290 aa6.88□□□□□ -1.31
USH2A-203ENST00000463147 PI3P19957 117 aa6.88□□□□□ -1.31
USH2A-203ENST00000463147 TNNI2P48788 182 aa6.88□□□□□ -1.31
USH2A-203ENST00000463147 CHMP4BP1P59074 171 aa6.88□□□□□ -1.31
USH2A-203ENST00000463147 SLC14A2Q15849 920 aa6.88□□□□□ -1.31
USH2A-203ENST00000463147 NLRX1Q86UT6 975 aa6.88□□□□□ -1.31
USH2A-203ENST00000463147 SETDB2Q96T68 719 aa6.88□□□□□ -1.31
USH2A-203ENST00000463147 ZNF281Q9Y2X9 895 aa6.88□□□□□ -1.31
USH2A-203ENST00000463147 BPNT1O95861 308 aa6.87□□□□□ -1.31
USH2A-203ENST00000463147 LDHBP07195 334 aaKnown RBP6.87□□□□□ -1.31
USH2A-203ENST00000463147 TMEM62Q0P6H9 643 aa6.87□□□□□ -1.31
USH2A-203ENST00000463147 NRDCO43847 1150 aa6.86□□□□□ -1.31
USH2A-203ENST00000463147 IGSF3O75054 1194 aa6.86□□□□□ -1.31
USH2A-203ENST00000463147 SKOR2Q2VWA4 1001 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms