RNA–Protein interactions for RNA: ENST00000463094.5

MSH5-210, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-210ENST00000463094 NAPBQ9H115 298 aa23.75■■□□□ 1.39
MSH5-210ENST00000463094 VCPKMTQ9H867 229 aa23.75■■□□□ 1.39
MSH5-210ENST00000463094 BAZ2AQ9UIF9 1905 aaKnown RBP23.74■■□□□ 1.39
MSH5-210ENST00000463094 PEX10O60683 326 aa23.74■■□□□ 1.39
MSH5-210ENST00000463094 TFRCP02786 760 aaKnown RBP23.74■■□□□ 1.39
MSH5-210ENST00000463094 EEF2P13639 858 aaKnown RBP23.74■■□□□ 1.39
MSH5-210ENST00000463094 Q3C1V9 767 aa23.74■■□□□ 1.39
MSH5-210ENST00000463094 B4GALNT3Q6L9W6 998 aa23.74■■□□□ 1.39
MSH5-210ENST00000463094 SAMD1Q6SPF0 538 aaPredicted RBP23.74■■□□□ 1.39
MSH5-210ENST00000463094 LBX2Q6XYB7 198 aa23.74■■□□□ 1.39
MSH5-210ENST00000463094 SPICE1Q8N0Z3 855 aa23.74■■□□□ 1.39
MSH5-210ENST00000463094 PORCNQ9H237 461 aa23.74■■□□□ 1.39
MSH5-210ENST00000463094 GJD2Q9UKL4 321 aa23.74■■□□□ 1.39
MSH5-210ENST00000463094 SPDYE16A6NNV3 312 aaPredicted RBP23.73■■□□□ 1.39
MSH5-210ENST00000463094 WDR46O15213 610 aaKnown RBP23.73■■□□□ 1.39
MSH5-210ENST00000463094 FLOT1O75955 427 aa23.73■■□□□ 1.39
MSH5-210ENST00000463094 ZKSCAN1P17029 563 aaPredicted RBP23.73■■□□□ 1.39
MSH5-210ENST00000463094 PDE1AP54750 535 aa23.73■■□□□ 1.39
MSH5-210ENST00000463094 PDE4BQ07343 736 aa23.73■■□□□ 1.39
MSH5-210ENST00000463094 ZMYM1Q5SVZ6 1142 aa23.73■■□□□ 1.39
MSH5-210ENST00000463094 CLEC10AQ8IUN9 316 aa23.73■■□□□ 1.39
MSH5-210ENST00000463094 IFNL3Q8IZI9 196 aa23.73■■□□□ 1.39
MSH5-210ENST00000463094 MB21D1Q8N884 522 aa23.73■■□□□ 1.39
MSH5-210ENST00000463094 DEFB118Q96PH6 123 aa23.73■■□□□ 1.39
MSH5-210ENST00000463094 LNPKQ9C0E8 428 aa23.73■■□□□ 1.39
MSH5-210ENST00000463094 HMX1Q9NP08 348 aaPredicted RBP23.73■■□□□ 1.39
MSH5-210ENST00000463094 STAP2Q9UGK3 403 aa23.73■■□□□ 1.39
MSH5-210ENST00000463094 MYH8P13535 1937 aa23.72■■□□□ 1.39
MSH5-210ENST00000463094 TRIM6-TRIM34B2RNG4 842 aa23.72■■□□□ 1.39
MSH5-210ENST00000463094 SGPL1O95470 568 aa23.72■■□□□ 1.39
MSH5-210ENST00000463094 XRCC5P13010 732 aaKnown RBP23.72■■□□□ 1.39
MSH5-210ENST00000463094 SEC62Q99442 399 aaKnown RBP23.72■■□□□ 1.39
MSH5-210ENST00000463094 ROBO3Q96MS0 1386 aa23.71■■□□□ 1.39
MSH5-210ENST00000463094 SMIM22K7EJ46 135 aa23.71■■□□□ 1.39
MSH5-210ENST00000463094 PLS1Q14651 629 aa23.71■■□□□ 1.39
MSH5-210ENST00000463094 EXOC6Q8TAG9 804 aa23.71■■□□□ 1.39
MSH5-210ENST00000463094 APBA2Q99767 749 aa23.71■■□□□ 1.39
MSH5-210ENST00000463094 HTATIP2Q9BUP3 242 aa23.71■■□□□ 1.39
MSH5-210ENST00000463094 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.71■■□□□ 1.39
MSH5-210ENST00000463094 KIAA0100Q14667 2235 aaKnown RBP23.71■■□□□ 1.39
MSH5-210ENST00000463094 RPTORQ8N122 1335 aa23.7■■□□□ 1.38
MSH5-210ENST00000463094 SALL3Q9BXA9 1300 aa23.7■■□□□ 1.38
MSH5-210ENST00000463094 EPB41L4AQ9HCS5 686 aaPredicted RBP23.7■■□□□ 1.38
MSH5-210ENST00000463094 SLC15A5A6NIM6 579 aa23.69■■□□□ 1.38
MSH5-210ENST00000463094 CNMDO75829 334 aa23.69■■□□□ 1.38
MSH5-210ENST00000463094 FARP2O94887 1054 aaPredicted RBP23.69■■□□□ 1.38
MSH5-210ENST00000463094 RASA1P20936 1047 aa23.69■■□□□ 1.38
MSH5-210ENST00000463094 DPF3Q92784 378 aa23.69■■□□□ 1.38
MSH5-210ENST00000463094 SHISA4Q96DD7 197 aa23.69■■□□□ 1.38
MSH5-210ENST00000463094 BTBD7Q9P203 1132 aa23.69■■□□□ 1.38
MSH5-210ENST00000463094 SUPT16HQ9Y5B9 1047 aaKnown RBP23.69■■□□□ 1.38
MSH5-210ENST00000463094 TSPY3P0CV98 308 aa23.68■■□□□ 1.38
MSH5-210ENST00000463094 TSPY8P0CW00 308 aa23.68■■□□□ 1.38
MSH5-210ENST00000463094 MAP2K5Q13163 448 aa23.68■■□□□ 1.38
MSH5-210ENST00000463094 MORN1Q5T089 497 aa23.68■■□□□ 1.38
MSH5-210ENST00000463094 CHD1LQ86WJ1 897 aa23.68■■□□□ 1.38
MSH5-210ENST00000463094 TICAM2Q86XR7 235 aa23.68■■□□□ 1.38
MSH5-210ENST00000463094 SIAH1Q8IUQ4 282 aa23.68■■□□□ 1.38
MSH5-210ENST00000463094 SMC5Q8IY18 1101 aa23.68■■□□□ 1.38
MSH5-210ENST00000463094 TRIB2Q92519 343 aa23.68■■□□□ 1.38
MSH5-210ENST00000463094 RILPL2Q969X0 211 aa23.68■■□□□ 1.38
MSH5-210ENST00000463094 PAK6Q9NQU5 681 aaPredicted RBP23.68■■□□□ 1.38
MSH5-210ENST00000463094 HELLSQ9NRZ9 838 aa23.68■■□□□ 1.38
MSH5-210ENST00000463094 PRDM1O75626 825 aa23.67■■□□□ 1.38
MSH5-210ENST00000463094 PRKAR2AP13861 404 aaKnown RBP23.67■■□□□ 1.38
MSH5-210ENST00000463094 PTPREP23469 700 aa23.67■■□□□ 1.38
MSH5-210ENST00000463094 DSG3P32926 999 aa23.67■■□□□ 1.38
MSH5-210ENST00000463094 PPARAQ07869 468 aa23.67■■□□□ 1.38
MSH5-210ENST00000463094 MFSD14CQ5VZR4 134 aa23.67■■□□□ 1.38
MSH5-210ENST00000463094 SPATC1LQ9H0A9 340 aa23.67■■□□□ 1.38
MSH5-210ENST00000463094 SLC5A4Q9NY91 659 aa23.67■■□□□ 1.38
MSH5-210ENST00000463094 NYAP2Q9P242 653 aa23.67■■□□□ 1.38
MSH5-210ENST00000463094 TNRC18O15417 2968 aaPredicted RBP23.67■■□□□ 1.38
MSH5-210ENST00000463094 STRNO43815 780 aa23.66■■□□□ 1.38
MSH5-210ENST00000463094 PPP4R3BQ5MIZ7 849 aa23.66■■□□□ 1.38
MSH5-210ENST00000463094 DPP9Q86TI2 863 aa23.66■■□□□ 1.38
MSH5-210ENST00000463094 MROH8Q9H579 483 aa23.66■■□□□ 1.38
MSH5-210ENST00000463094 CLIP2Q9UDT6 1046 aa23.66■■□□□ 1.38
MSH5-210ENST00000463094 CTDP1Q9Y5B0 961 aaPredicted RBP23.66■■□□□ 1.38
MSH5-210ENST00000463094 PDE4DIPQ5VU43 2346 aa23.66■■□□□ 1.38
MSH5-210ENST00000463094 KIAA1755Q5JYT7 1200 aa23.65■■□□□ 1.38
MSH5-210ENST00000463094 POTEEQ6S8J3 1075 aa23.65■■□□□ 1.38
MSH5-210ENST00000463094 NCAPG2Q86XI2 1143 aa23.65■■□□□ 1.38
MSH5-210ENST00000463094 SHCBP1Q8NEM2 672 aa23.65■■□□□ 1.38
MSH5-210ENST00000463094 ATG4CQ96DT6 458 aa23.65■■□□□ 1.38
MSH5-210ENST00000463094 MOV10L1Q9BXT6 1211 aaKnown RBP23.65■■□□□ 1.38
MSH5-210ENST00000463094 CENPFP49454 3210 aa23.65■■□□□ 1.38
MSH5-210ENST00000463094 MFAP1P55081 439 aaKnown RBP23.64■■□□□ 1.37
MSH5-210ENST00000463094 NUCB1Q02818 461 aa23.64■■□□□ 1.37
MSH5-210ENST00000463094 MCMDC2Q4G0Z9 681 aa23.64■■□□□ 1.37
MSH5-210ENST00000463094 FAM83BQ5T0W9 1011 aa23.64■■□□□ 1.37
MSH5-210ENST00000463094 CCDC129Q6ZRS4 1044 aa23.64■■□□□ 1.37
MSH5-210ENST00000463094 USP6NLQ92738 828 aa23.64■■□□□ 1.37
MSH5-210ENST00000463094 ISY1Q9ULR0 285 aaKnown RBP23.64■■□□□ 1.37
MSH5-210ENST00000463094 SLC25A27O95847 323 aa23.63■■□□□ 1.37
MSH5-210ENST00000463094 TTLL1O95922 423 aa23.63■■□□□ 1.37
MSH5-210ENST00000463094 ERCC3P19447 782 aa23.63■■□□□ 1.37
MSH5-210ENST00000463094 TRIM32Q13049 653 aa23.63■■□□□ 1.37
MSH5-210ENST00000463094 GRB14Q14449 540 aa23.63■■□□□ 1.37
MSH5-210ENST00000463094 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms