RNA–Protein interactions for RNA: ENST00000463009.1

ARPC1A-203, Transcript of actin related protein 2/3 complex subunit 1A, humanhuman

TSL 3

Gene ARPC1A, Length 719 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1A-203ENST00000463009 C8orf34Q49A92 452 aa12.89□□□□□ -0.35
ARPC1A-203ENST00000463009 USP17L2Q6R6M4 530 aa12.89□□□□□ -0.35
ARPC1A-203ENST00000463009 STOX1Q6ZVD7 989 aa12.89□□□□□ -0.35
ARPC1A-203ENST00000463009 PLCD3Q8N3E9 789 aa12.89□□□□□ -0.35
ARPC1A-203ENST00000463009 MS4A4AQ96JQ5 239 aa12.89□□□□□ -0.35
ARPC1A-203ENST00000463009 ZKSCAN3Q9BRR0 538 aa12.89□□□□□ -0.35
ARPC1A-203ENST00000463009 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.89□□□□□ -0.35
ARPC1A-203ENST00000463009 GOPCQ9HD26 462 aa12.89□□□□□ -0.35
ARPC1A-203ENST00000463009 PTPRFP10586 1907 aa12.88□□□□□ -0.35
ARPC1A-203ENST00000463009 IGKV6D-41A0A0C4DH26 115 aa12.88□□□□□ -0.35
ARPC1A-203ENST00000463009 C19orf81C9J6K1 198 aa12.88□□□□□ -0.35
ARPC1A-203ENST00000463009 BTBD19C9JJ37 291 aa12.88□□□□□ -0.35
ARPC1A-203ENST00000463009 IGF2BP3O00425 579 aaKnown RBP eCLIP12.88□□□□□ -0.35
ARPC1A-203ENST00000463009 HSPA4P34932 840 aa12.88□□□□□ -0.35
ARPC1A-203ENST00000463009 INHBEP58166 350 aa12.88□□□□□ -0.35
ARPC1A-203ENST00000463009 KRT32Q14532 448 aa12.88□□□□□ -0.35
ARPC1A-203ENST00000463009 SART3Q15020 963 aaKnown RBP12.88□□□□□ -0.35
ARPC1A-203ENST00000463009 CTU1Q7Z7A3 348 aaKnown RBP12.88□□□□□ -0.35
ARPC1A-203ENST00000463009 IFNL1Q8IU54 200 aa12.88□□□□□ -0.35
ARPC1A-203ENST00000463009 KIAA1683Q9H0B3 1180 aa12.88□□□□□ -0.35
ARPC1A-203ENST00000463009 MTMR4Q9NYA4 1195 aa12.88□□□□□ -0.35
ARPC1A-203ENST00000463009 CLIP2Q9UDT6 1046 aa12.88□□□□□ -0.35
ARPC1A-203ENST00000463009 MTMR7Q9Y216 660 aa12.88□□□□□ -0.35
ARPC1A-203ENST00000463009 LOC285556D6RIA3 1793 aa12.88□□□□□ -0.35
ARPC1A-203ENST00000463009 TNKSO95271 1327 aa12.88□□□□□ -0.35
ARPC1A-203ENST00000463009 A0A1W2PRG0 241 aa12.87□□□□□ -0.35
ARPC1A-203ENST00000463009 ERICH2A1L162 156 aa12.87□□□□□ -0.35
ARPC1A-203ENST00000463009 EPB41L2O43491 1005 aaKnown RBP12.87□□□□□ -0.35
ARPC1A-203ENST00000463009 PABPC4Q13310 644 aaKnown RBP eCLIP12.87□□□□□ -0.357e-6■■□□□ 14.2
ARPC1A-203ENST00000463009 CCDC178Q5BJE1 867 aa12.87□□□□□ -0.35
ARPC1A-203ENST00000463009 SH3D19Q5HYK7 790 aa12.87□□□□□ -0.35
ARPC1A-203ENST00000463009 TREML2Q5T2D2 321 aa12.87□□□□□ -0.35
ARPC1A-203ENST00000463009 ANKRD23Q86SG2 305 aa12.87□□□□□ -0.35
ARPC1A-203ENST00000463009 SPICE1Q8N0Z3 855 aa12.87□□□□□ -0.35
ARPC1A-203ENST00000463009 FAM43AQ8N2R8 423 aa12.87□□□□□ -0.35
ARPC1A-203ENST00000463009 PROCA1Q8NCQ7 364 aaPredicted RBP12.87□□□□□ -0.35
ARPC1A-203ENST00000463009 ZSCAN10Q96SZ4 725 aaPredicted RBP12.87□□□□□ -0.35
ARPC1A-203ENST00000463009 USP26Q9BXU7 913 aa12.87□□□□□ -0.35
ARPC1A-203ENST00000463009 VCPKMTQ9H867 229 aa12.87□□□□□ -0.35
ARPC1A-203ENST00000463009 NYAP2Q9P242 653 aa12.87□□□□□ -0.35
ARPC1A-203ENST00000463009 PNMA3Q9UL41 463 aa12.87□□□□□ -0.35
ARPC1A-203ENST00000463009 AGTPBP1Q9UPW5 1226 aa12.87□□□□□ -0.35
ARPC1A-203ENST00000463009 TMX2Q9Y320 296 aa12.87□□□□□ -0.35
ARPC1A-203ENST00000463009 MYH4Q9Y623 1939 aa12.86□□□□□ -0.35
ARPC1A-203ENST00000463009 TESPA1A2RU30 521 aaPredicted RBP12.86□□□□□ -0.35
ARPC1A-203ENST00000463009 PDHXO00330 501 aa12.86□□□□□ -0.35
ARPC1A-203ENST00000463009 IFIT3O14879 490 aaKnown RBP12.86□□□□□ -0.35
ARPC1A-203ENST00000463009 TRPA1O75762 1119 aa12.86□□□□□ -0.35
ARPC1A-203ENST00000463009 ALDH1A1P00352 501 aa12.86□□□□□ -0.35
ARPC1A-203ENST00000463009 VCAM1P19320 739 aa12.86□□□□□ -0.35
ARPC1A-203ENST00000463009 TM4SF4P48230 202 aa12.86□□□□□ -0.35
ARPC1A-203ENST00000463009 IRX3P78415 501 aaPredicted RBP12.86□□□□□ -0.35
ARPC1A-203ENST00000463009 TAF1CQ15572 869 aaPredicted RBP12.86□□□□□ -0.35
ARPC1A-203ENST00000463009 IFIT1BQ5T764 474 aaKnown RBP12.86□□□□□ -0.35
ARPC1A-203ENST00000463009 CYB5R4Q7L1T6 521 aa12.86□□□□□ -0.35
ARPC1A-203ENST00000463009 CHST3Q7LGC8 479 aa12.86□□□□□ -0.35
ARPC1A-203ENST00000463009 MB21D2Q8IYB1 491 aaPredicted RBP12.86□□□□□ -0.35
ARPC1A-203ENST00000463009 NKX2-3Q8TAU0 364 aa12.86□□□□□ -0.35
ARPC1A-203ENST00000463009 CHMP4CQ96CF2 233 aa12.86□□□□□ -0.35
ARPC1A-203ENST00000463009 JAKMIP1Q96N16 626 aaKnown RBP12.86□□□□□ -0.35
ARPC1A-203ENST00000463009 PARK7Q99497 189 aaKnown RBP12.86□□□□□ -0.35
ARPC1A-203ENST00000463009 PTPN18Q99952 460 aa12.86□□□□□ -0.35
ARPC1A-203ENST00000463009 TANGO6Q9C0B7 1094 aa12.86□□□□□ -0.35
ARPC1A-203ENST00000463009 KAT14Q9H8E8 782 aa12.86□□□□□ -0.35
ARPC1A-203ENST00000463009 UPF2Q9HAU5 1272 aaKnown RBP12.86□□□□□ -0.35
ARPC1A-203ENST00000463009 IL17RBQ9NRM6 502 aa12.86□□□□□ -0.35
ARPC1A-203ENST00000463009 EMILIN3Q9NT22 766 aa12.86□□□□□ -0.35
ARPC1A-203ENST00000463009 TCP11L1Q9NUJ3 509 aa12.86□□□□□ -0.35
ARPC1A-203ENST00000463009 PRC1O43663 620 aa12.85□□□□□ -0.35
ARPC1A-203ENST00000463009 TOP1P11387 765 aaKnown RBP12.85□□□□□ -0.35
ARPC1A-203ENST00000463009 OSBPP22059 807 aa12.85□□□□□ -0.35
ARPC1A-203ENST00000463009 MCM5P33992 734 aa12.85□□□□□ -0.35
ARPC1A-203ENST00000463009 MOGSQ13724 837 aa12.85□□□□□ -0.35
ARPC1A-203ENST00000463009 HABP4Q5JVS0 413 aaKnown RBP12.85□□□□□ -0.35
ARPC1A-203ENST00000463009 RASEFQ8IZ41 740 aa12.85□□□□□ -0.35
ARPC1A-203ENST00000463009 SMCR8Q8TEV9 937 aaPredicted RBP12.85□□□□□ -0.35
ARPC1A-203ENST00000463009 SPOCK2Q92563 424 aa12.85□□□□□ -0.35
ARPC1A-203ENST00000463009 LPAR1Q92633 364 aa12.85□□□□□ -0.35
ARPC1A-203ENST00000463009 C12orf42Q96LP6 360 aa12.85□□□□□ -0.35
ARPC1A-203ENST00000463009 NEK1Q96PY6 1258 aa12.85□□□□□ -0.35
ARPC1A-203ENST00000463009 RPAP3Q9H6T3 665 aaPredicted RBP12.85□□□□□ -0.35
ARPC1A-203ENST00000463009 RNF186Q9NXI6 227 aa12.85□□□□□ -0.35
ARPC1A-203ENST00000463009 ZSWIM5Q9P217 1185 aa12.85□□□□□ -0.35
ARPC1A-203ENST00000463009 HPS5Q9UPZ3 1129 aa12.85□□□□□ -0.35
ARPC1A-203ENST00000463009 SNX14Q9Y5W7 946 aa12.85□□□□□ -0.35
ARPC1A-203ENST00000463009 WDR46O15213 610 aaKnown RBP12.84□□□□□ -0.35
ARPC1A-203ENST00000463009 SEC24BO95487 1268 aa12.84□□□□□ -0.35
ARPC1A-203ENST00000463009 NDUFB10O96000 172 aa12.84□□□□□ -0.35
ARPC1A-203ENST00000463009 PSMA5P28066 241 aa12.84□□□□□ -0.35
ARPC1A-203ENST00000463009 FGD1P98174 961 aa12.84□□□□□ -0.35
ARPC1A-203ENST00000463009 WTAPQ15007 396 aa12.84□□□□□ -0.35
ARPC1A-203ENST00000463009 PKN2Q16513 984 aaKnown RBP12.84□□□□□ -0.35
ARPC1A-203ENST00000463009 CCDC96Q2M329 555 aa12.84□□□□□ -0.35
ARPC1A-203ENST00000463009 TMEM67Q5HYA8 995 aa12.84□□□□□ -0.35
ARPC1A-203ENST00000463009 SLFN13Q68D06 897 aa12.84□□□□□ -0.35
ARPC1A-203ENST00000463009 GPAT2Q6NUI2 795 aa12.84□□□□□ -0.35
ARPC1A-203ENST00000463009 SIAH1Q8IUQ4 282 aa12.84□□□□□ -0.35
ARPC1A-203ENST00000463009 ENAHQ8N8S7 591 aaPredicted RBP12.84□□□□□ -0.35
ARPC1A-203ENST00000463009 TMEM47Q9BQJ4 181 aa12.84□□□□□ -0.35
ARPC1A-203ENST00000463009 ZFYVE28Q9HCC9 887 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 216.6 ms