RNA–Protein interactions for RNA: ENST00000462862.1

ERCC4-203, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-203ENST00000462862 UPP2O95045 317 aa4.8□□□□□ -1.64
ERCC4-203ENST00000462862 APPP05067 770 aa4.8□□□□□ -1.64
ERCC4-203ENST00000462862 FGRP09769 529 aa4.8□□□□□ -1.64
ERCC4-203ENST00000462862 CCDC192P0DO97 292 aa4.8□□□□□ -1.64
ERCC4-203ENST00000462862 BMP2P12643 396 aa4.8□□□□□ -1.64
ERCC4-203ENST00000462862 LORP23490 312 aaPredicted RBP4.8□□□□□ -1.64
ERCC4-203ENST00000462862 PDIA3P30101 505 aaKnown RBP4.8□□□□□ -1.64
ERCC4-203ENST00000462862 GNAQP50148 359 aa4.8□□□□□ -1.64
ERCC4-203ENST00000462862 METAP2P50579 478 aaKnown RBP eCLIP4.8□□□□□ -1.64
ERCC4-203ENST00000462862 CTDSPL2Q05D32 466 aa4.8□□□□□ -1.64
ERCC4-203ENST00000462862 PDE4BQ07343 736 aa4.8□□□□□ -1.64
ERCC4-203ENST00000462862 SCRN1Q12765 414 aa4.8□□□□□ -1.64
ERCC4-203ENST00000462862 SAFBQ15424 915 aaKnown RBP eCLIP4.8□□□□□ -1.64
ERCC4-203ENST00000462862 ERFEQ4G0M1 354 aa4.8□□□□□ -1.64
ERCC4-203ENST00000462862 TBC1D9BQ66K14 1250 aa4.8□□□□□ -1.64
ERCC4-203ENST00000462862 CAVIN1Q6NZI2 390 aaKnown RBP4.8□□□□□ -1.64
ERCC4-203ENST00000462862 POTEAQ6S8J7 498 aa4.8□□□□□ -1.64
ERCC4-203ENST00000462862 CCDC129Q6ZRS4 1044 aa4.8□□□□□ -1.64
ERCC4-203ENST00000462862 SH3BP5LQ7L8J4 393 aa4.8□□□□□ -1.64
ERCC4-203ENST00000462862 TEX2Q8IWB9 1127 aa4.8□□□□□ -1.64
ERCC4-203ENST00000462862 ELOA2Q8IYF1 753 aaPredicted RBP4.8□□□□□ -1.64
ERCC4-203ENST00000462862 IFNL3Q8IZI9 196 aa4.8□□□□□ -1.64
ERCC4-203ENST00000462862 MAGEB6Q8N7X4 407 aa4.8□□□□□ -1.64
ERCC4-203ENST00000462862 RPGRQ92834 1020 aaKnown RBP4.8□□□□□ -1.64
ERCC4-203ENST00000462862 TRIM44Q96DX7 344 aaPredicted RBP4.8□□□□□ -1.64
ERCC4-203ENST00000462862 SPATA32Q96LK8 384 aa4.8□□□□□ -1.64
ERCC4-203ENST00000462862 PYM1Q9BRP8 204 aaKnown RBP4.8□□□□□ -1.64
ERCC4-203ENST00000462862 UBAC1Q9BSL1 405 aa4.8□□□□□ -1.64
ERCC4-203ENST00000462862 C1QTNF2Q9BXJ5 285 aa4.8□□□□□ -1.64
ERCC4-203ENST00000462862 PUS7LQ9H0K6 701 aaKnown RBP4.8□□□□□ -1.64
ERCC4-203ENST00000462862 TSPY26PQ9H489 355 aa4.8□□□□□ -1.64
ERCC4-203ENST00000462862 PIH1D3Q9NQM4 214 aaKnown RBP4.8□□□□□ -1.64
ERCC4-203ENST00000462862 HOOK1Q9UJC3 728 aaKnown RBP4.8□□□□□ -1.64
ERCC4-203ENST00000462862 CEP131Q9UPN4 1083 aa4.8□□□□□ -1.64
ERCC4-203ENST00000462862 SLC12A7Q9Y666 1083 aa4.8□□□□□ -1.64
ERCC4-203ENST00000462862 TAF1LQ8IZX4 1826 aa4.8□□□□□ -1.64
ERCC4-203ENST00000462862 KIAA1551Q9HCM1 1747 aa4.8□□□□□ -1.64
ERCC4-203ENST00000462862 SBF2Q86WG5 1849 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 MYO3BQ8WXR4 1341 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 CCDC69A6NI79 296 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 GOLGA8BA8MQT2 603 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 SH2B2O14492 632 aaPredicted RBP4.79□□□□□ -1.64
ERCC4-203ENST00000462862 ZBTB43O43298 467 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 MYO1BO43795 1136 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 MBD4O95243 580 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 PRKCSHP14314 528 aaPredicted RBP4.79□□□□□ -1.64
ERCC4-203ENST00000462862 IFNAR1P17181 557 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 CYP7A1P22680 504 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 ALDH1B1P30837 517 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 PDE6BP35913 854 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 MMP14P50281 582 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 FKBP1AP62942 108 aaKnown RBP4.79□□□□□ -1.64
ERCC4-203ENST00000462862 PPARAQ07869 468 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 RESTQ13127 1097 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 SEMA3FQ13275 785 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 PKP1Q13835 747 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 WTAPQ15007 396 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 CC2D2BQ6DHV5 1058 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 GALNT17Q6IS24 598 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 APOA5Q6Q788 366 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 CCDC73Q6ZRK6 1079 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 RBM43Q6ZSC3 357 aaKnown RBP4.79□□□□□ -1.64
ERCC4-203ENST00000462862 STOX1Q6ZVD7 989 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 NOL8Q76FK4 1167 aaKnown RBP4.79□□□□□ -1.64
ERCC4-203ENST00000462862 USP48Q86UV5 1035 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 TRMT44Q8IYL2 757 aaKnown RBP4.79□□□□□ -1.64
ERCC4-203ENST00000462862 FAM43AQ8N2R8 423 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 FBXO18Q8NFZ0 1043 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 C8orf76Q96K31 380 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 FAM84BQ96KN1 310 aaPredicted RBP4.79□□□□□ -1.64
ERCC4-203ENST00000462862 PPP1R9BQ96SB3 815 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 SEC62Q99442 399 aaKnown RBP4.79□□□□□ -1.64
ERCC4-203ENST00000462862 EYA3Q99504 573 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 LZTS2Q9BRK4 669 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 RNF26Q9BY78 433 aaPredicted RBP4.79□□□□□ -1.64
ERCC4-203ENST00000462862 BRMS1Q9HCU9 246 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 SEC31BQ9NQW1 1179 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 RAI14Q9P0K7 980 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 USP25Q9UHP3 1055 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 MAP4K5Q9Y4K4 846 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 SLC4A4Q9Y6R1 1079 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 C4AP0C0L4 1744 aa4.79□□□□□ -1.64
ERCC4-203ENST00000462862 KLF18A0A0U1RQI7 1052 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 GSG1L2A8MUP6 293 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 GOLGA6L6A8MZA4 724 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 hCG_1984214I3L0E3 225 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 IFIT3O14879 490 aaKnown RBP4.78□□□□□ -1.64
ERCC4-203ENST00000462862 FOXP2O15409 715 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 FIBPO43427 364 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 PPFIA3O75145 1194 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 PPP6R2O75170 966 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 DEXIO95424 95 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 LARGE1O95461 756 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 LDHBP07195 334 aaKnown RBP4.78□□□□□ -1.64
ERCC4-203ENST00000462862 XRCC6P12956 609 aaKnown RBP eCLIP4.78□□□□□ -1.64
ERCC4-203ENST00000462862 GYS1P13807 737 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 IL1R1P14778 569 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 NPR1P16066 1061 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 FSHRP23945 695 aa4.78□□□□□ -1.64
ERCC4-203ENST00000462862 SMARCA1P28370 1054 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms