RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 EMILIN3Q9NT22 766 aa11.3□□□□□ -0.6
PKP4-208ENST00000462335 MTMR7Q9Y216 660 aa11.3□□□□□ -0.6
PKP4-208ENST00000462335 TRIM17Q9Y577 477 aa11.3□□□□□ -0.6
PKP4-208ENST00000462335 ZMYM6O95789 1325 aa11.3□□□□□ -0.6
PKP4-208ENST00000462335 ROBO3Q96MS0 1386 aa11.29□□□□□ -0.6
PKP4-208ENST00000462335 ERICH2A1L162 156 aa11.29□□□□□ -0.6
PKP4-208ENST00000462335 SGSM2O43147 1006 aa11.29□□□□□ -0.6
PKP4-208ENST00000462335 ORC4O43929 436 aa11.29□□□□□ -0.6
PKP4-208ENST00000462335 FLOT1O75955 427 aa11.29□□□□□ -0.6
PKP4-208ENST00000462335 HOXA7P31268 230 aaPredicted RBP11.29□□□□□ -0.6
PKP4-208ENST00000462335 NT5C2P49902 561 aa11.29□□□□□ -0.6
PKP4-208ENST00000462335 FCGRTP55899 365 aa11.29□□□□□ -0.6
PKP4-208ENST00000462335 CCNA1P78396 465 aa11.29□□□□□ -0.6
PKP4-208ENST00000462335 COG2Q14746 738 aa11.29□□□□□ -0.6
PKP4-208ENST00000462335 WDR78Q5VTH9 848 aa11.29□□□□□ -0.6
PKP4-208ENST00000462335 GPRC5AQ8NFJ5 357 aa11.29□□□□□ -0.6
PKP4-208ENST00000462335 P2RX7Q99572 595 aaKnown RBP11.29□□□□□ -0.6
PKP4-208ENST00000462335 ESYT1Q9BSJ8 1104 aa11.29□□□□□ -0.6
PKP4-208ENST00000462335 UBAC1Q9BSL1 405 aa11.29□□□□□ -0.6
PKP4-208ENST00000462335 PAGR1Q9BTK6 254 aa11.29□□□□□ -0.6
PKP4-208ENST00000462335 VCPKMTQ9H867 229 aa11.29□□□□□ -0.6
PKP4-208ENST00000462335 NYAP2Q9P242 653 aa11.29□□□□□ -0.6
PKP4-208ENST00000462335 TMX2Q9Y320 296 aa11.29□□□□□ -0.6
PKP4-208ENST00000462335 SIPA1L1O43166 1804 aa11.29□□□□□ -0.6
PKP4-208ENST00000462335 LAMB1P07942 1786 aa11.28□□□□□ -0.6
PKP4-208ENST00000462335 WDR46O15213 610 aaKnown RBP11.28□□□□□ -0.6
PKP4-208ENST00000462335 EIF5BO60841 1220 aaKnown RBP11.28□□□□□ -0.6
PKP4-208ENST00000462335 GNRH1P01148 92 aa11.28□□□□□ -0.6
PKP4-208ENST00000462335 VCAM1P19320 739 aa11.28□□□□□ -0.6
PKP4-208ENST00000462335 GUCY1A2P33402 732 aa11.28□□□□□ -0.6
PKP4-208ENST00000462335 PSMC4P43686 418 aa11.28□□□□□ -0.6
PKP4-208ENST00000462335 MOGSQ13724 837 aa11.28□□□□□ -0.6
PKP4-208ENST00000462335 PLS1Q14651 629 aa11.28□□□□□ -0.6
PKP4-208ENST00000462335 SART3Q15020 963 aaKnown RBP11.28□□□□□ -0.6
PKP4-208ENST00000462335 CLEC10AQ8IUN9 316 aa11.28□□□□□ -0.6
PKP4-208ENST00000462335 STAG1Q8WVM7 1258 aa11.28□□□□□ -0.6
PKP4-208ENST00000462335 COA7Q96BR5 231 aa11.28□□□□□ -0.6
PKP4-208ENST00000462335 CEP95Q96GE4 821 aa11.28□□□□□ -0.6
PKP4-208ENST00000462335 INCENPQ9NQS7 918 aa11.28□□□□□ -0.6
PKP4-208ENST00000462335 MTMR4Q9NYA4 1195 aa11.28□□□□□ -0.6
PKP4-208ENST00000462335 A0A1W2PRG0 241 aa11.27□□□□□ -0.61
PKP4-208ENST00000462335 F5H6K3 240 aa11.27□□□□□ -0.61
PKP4-208ENST00000462335 TNPO2O14787 897 aaKnown RBP11.27□□□□□ -0.61
PKP4-208ENST00000462335 REC8O95072 547 aa11.27□□□□□ -0.61
PKP4-208ENST00000462335 HERVK_113P62684 666 aa11.27□□□□□ -0.61
PKP4-208ENST00000462335 LACTBP83111 547 aaPredicted RBP11.27□□□□□ -0.61
PKP4-208ENST00000462335 KLRC3Q07444 240 aa11.27□□□□□ -0.61
PKP4-208ENST00000462335 SLFN13Q68D06 897 aa11.27□□□□□ -0.61
PKP4-208ENST00000462335 C17orf99Q6UX52 265 aa11.27□□□□□ -0.61
PKP4-208ENST00000462335 CATSPERGQ6ZRH7 1159 aa11.27□□□□□ -0.61
PKP4-208ENST00000462335 NBPF11Q86T75 865 aa11.27□□□□□ -0.61
PKP4-208ENST00000462335 LRRC47Q8N1G4 583 aaKnown RBP11.27□□□□□ -0.61
PKP4-208ENST00000462335 RAET1EQ8TD07 263 aa11.27□□□□□ -0.61
PKP4-208ENST00000462335 CHMP4CQ96CF2 233 aa11.27□□□□□ -0.61
PKP4-208ENST00000462335 C12orf42Q96LP6 360 aa11.27□□□□□ -0.61
PKP4-208ENST00000462335 BIN2Q9UBW5 565 aaPredicted RBP11.27□□□□□ -0.61
PKP4-208ENST00000462335 DDX60LQ5H9U9 1706 aaKnown RBP11.26□□□□□ -0.61
PKP4-208ENST00000462335 PHIPQ8WWQ0 1821 aa11.26□□□□□ -0.61
PKP4-208ENST00000462335 B4E1Z4 1266 aa11.26□□□□□ -0.61
PKP4-208ENST00000462335 ZBED4O75132 1171 aa11.26□□□□□ -0.61
PKP4-208ENST00000462335 KDM4AO75164 1064 aa11.26□□□□□ -0.61
PKP4-208ENST00000462335 TOP1P11387 765 aaKnown RBP11.26□□□□□ -0.61
PKP4-208ENST00000462335 ZKSCAN1P17029 563 aaPredicted RBP11.26□□□□□ -0.61
PKP4-208ENST00000462335 SLC1A4P43007 532 aa11.26□□□□□ -0.61
PKP4-208ENST00000462335 SLC4A3P48751 1232 aa11.26□□□□□ -0.61
PKP4-208ENST00000462335 PTH1RQ03431 593 aa11.26□□□□□ -0.61
PKP4-208ENST00000462335 CCDC96Q2M329 555 aa11.26□□□□□ -0.61
PKP4-208ENST00000462335 FAM83BQ5T0W9 1011 aa11.26□□□□□ -0.61
PKP4-208ENST00000462335 NCOA7Q8NI08 942 aa11.26□□□□□ -0.61
PKP4-208ENST00000462335 CHURC1Q8WUH1 139 aa11.26□□□□□ -0.61
PKP4-208ENST00000462335 TTC14Q96N46 770 aa11.26□□□□□ -0.61
PKP4-208ENST00000462335 KAT14Q9H8E8 782 aa11.26□□□□□ -0.61
PKP4-208ENST00000462335 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.26□□□□□ -0.61
PKP4-208ENST00000462335 RBM8AQ9Y5S9 174 aaKnown RBP11.26□□□□□ -0.61
PKP4-208ENST00000462335 IVNS1ABPQ9Y6Y0 642 aa11.26□□□□□ -0.61
PKP4-208ENST00000462335 CCDC85CA6NKD9 419 aa11.25□□□□□ -0.61
PKP4-208ENST00000462335 FOXP2O15409 715 aa11.25□□□□□ -0.61
PKP4-208ENST00000462335 NDUFB10O96000 172 aa11.25□□□□□ -0.61
PKP4-208ENST00000462335 BMP3P12645 472 aa11.25□□□□□ -0.61
PKP4-208ENST00000462335 MCCP23508 829 aa11.25□□□□□ -0.61
PKP4-208ENST00000462335 PRMT2P55345 433 aa11.25□□□□□ -0.61
PKP4-208ENST00000462335 FGD1P98174 961 aa11.25□□□□□ -0.61
PKP4-208ENST00000462335 FAM110CQ1W6H9 321 aa11.25□□□□□ -0.61
PKP4-208ENST00000462335 FBXO46Q6PJ61 603 aaPredicted RBP11.25□□□□□ -0.61
PKP4-208ENST00000462335 OTOP1Q7RTM1 612 aa11.25□□□□□ -0.61
PKP4-208ENST00000462335 TBC1D10CQ8IV04 446 aa11.25□□□□□ -0.61
PKP4-208ENST00000462335 MB21D1Q8N884 522 aa11.25□□□□□ -0.61
PKP4-208ENST00000462335 MAP4K1Q92918 833 aa11.25□□□□□ -0.61
PKP4-208ENST00000462335 MKL1Q969V6 931 aa11.25□□□□□ -0.61
PKP4-208ENST00000462335 KIFC2Q96AC6 838 aa11.25□□□□□ -0.61
PKP4-208ENST00000462335 ZKSCAN3Q9BRR0 538 aa11.25□□□□□ -0.61
PKP4-208ENST00000462335 MCOLN1Q9GZU1 580 aa11.25□□□□□ -0.61
PKP4-208ENST00000462335 FEM1BQ9UK73 627 aa11.25□□□□□ -0.61
PKP4-208ENST00000462335 SYNPO2Q9UMS6 1093 aa11.25□□□□□ -0.61
PKP4-208ENST00000462335 RABGAP1Q9Y3P9 1069 aa11.25□□□□□ -0.61
PKP4-208ENST00000462335 IFIT3O14879 490 aaKnown RBP11.24□□□□□ -0.61
PKP4-208ENST00000462335 NMT2O60551 498 aa11.24□□□□□ -0.61
PKP4-208ENST00000462335 CAPN15O75808 1086 aa11.24□□□□□ -0.61
PKP4-208ENST00000462335 MAPK4P31152 587 aa11.24□□□□□ -0.61
PKP4-208ENST00000462335 ERVK-9P63128 1117 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms