RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 EPB41L4AQ9HCS5 686 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-210ENST00000462125 BAZ2AQ9UIF9 1905 aaKnown RBP15.82■□□□□ 0.12
C9orf3-210ENST00000462125 SPDYE16A6NNV3 312 aaPredicted RBP15.81■□□□□ 0.12
C9orf3-210ENST00000462125 MINDY4BA8MYZ0 360 aa15.81■□□□□ 0.12
C9orf3-210ENST00000462125 IGHDP01880 384 aa15.81■□□□□ 0.12
C9orf3-210ENST00000462125 INHAP05111 366 aa15.81■□□□□ 0.12
C9orf3-210ENST00000462125 EEF2P13639 858 aaKnown RBP15.81■□□□□ 0.12
C9orf3-210ENST00000462125 ICA1Q05084 483 aa15.81■□□□□ 0.12
C9orf3-210ENST00000462125 PRPF38BQ5VTL8 546 aaKnown RBP15.81■□□□□ 0.12
C9orf3-210ENST00000462125 SOCS4Q8WXH5 440 aa15.81■□□□□ 0.12
C9orf3-210ENST00000462125 SHISA4Q96DD7 197 aa15.81■□□□□ 0.12
C9orf3-210ENST00000462125 NUDT12Q9BQG2 462 aa15.81■□□□□ 0.12
C9orf3-210ENST00000462125 PAGR1Q9BTK6 254 aa15.81■□□□□ 0.12
C9orf3-210ENST00000462125 UNC93B1Q9H1C4 597 aa15.81■□□□□ 0.12
C9orf3-210ENST00000462125 SH2D4AQ9H788 454 aa15.81■□□□□ 0.12
C9orf3-210ENST00000462125 VCPKMTQ9H867 229 aa15.81■□□□□ 0.12
C9orf3-210ENST00000462125 BTBD7Q9P203 1132 aa15.81■□□□□ 0.12
C9orf3-210ENST00000462125 ROBO3Q96MS0 1386 aa15.8■□□□□ 0.12
C9orf3-210ENST00000462125 SGPL1O95470 568 aa15.8■□□□□ 0.12
C9orf3-210ENST00000462125 APPP05067 770 aa15.8■□□□□ 0.12
C9orf3-210ENST00000462125 RASA1P20936 1047 aa15.8■□□□□ 0.12
C9orf3-210ENST00000462125 CCNA1P78396 465 aa15.8■□□□□ 0.12
C9orf3-210ENST00000462125 MORN1Q5T089 497 aa15.8■□□□□ 0.12
C9orf3-210ENST00000462125 GPR142Q7Z601 462 aa15.8■□□□□ 0.12
C9orf3-210ENST00000462125 UBE2Q1Q7Z7E8 422 aa15.8■□□□□ 0.12
C9orf3-210ENST00000462125 CLEC10AQ8IUN9 316 aa15.8■□□□□ 0.12
C9orf3-210ENST00000462125 PAK6Q9NQU5 681 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-210ENST00000462125 SUPT16HQ9Y5B9 1047 aaKnown RBP15.8■□□□□ 0.12
C9orf3-210ENST00000462125 HMGCRP04035 888 aa15.79■□□□□ 0.12
C9orf3-210ENST00000462125 TDO2P48775 406 aa15.79■□□□□ 0.12
C9orf3-210ENST00000462125 PLEKHH3Q7Z736 793 aa15.79■□□□□ 0.12
C9orf3-210ENST00000462125 CCAR1Q8IX12 1150 aaKnown RBP15.79■□□□□ 0.12
C9orf3-210ENST00000462125 U2AF1L4Q8WU68 220 aaKnown RBP15.79■□□□□ 0.12
C9orf3-210ENST00000462125 NACAP1Q9BZK3 213 aa15.79■□□□□ 0.12
C9orf3-210ENST00000462125 LNPKQ9C0E8 428 aa15.79■□□□□ 0.12
C9orf3-210ENST00000462125 MKNK2Q9HBH9 465 aa15.79■□□□□ 0.12
C9orf3-210ENST00000462125 WDR46O15213 610 aaKnown RBP15.78■□□□□ 0.12
C9orf3-210ENST00000462125 FOXP2O15409 715 aa15.78■□□□□ 0.12
C9orf3-210ENST00000462125 CYP2B6P20813 491 aa15.78■□□□□ 0.12
C9orf3-210ENST00000462125 DSG3P32926 999 aa15.78■□□□□ 0.12
C9orf3-210ENST00000462125 NUCB1Q02818 461 aa15.78■□□□□ 0.12
C9orf3-210ENST00000462125 CHD1LQ86WJ1 897 aa15.78■□□□□ 0.12
C9orf3-210ENST00000462125 TRMT44Q8IYL2 757 aaKnown RBP15.78■□□□□ 0.12
C9orf3-210ENST00000462125 ZNF444Q8N0Y2 327 aaPredicted RBP15.78■□□□□ 0.12
C9orf3-210ENST00000462125 CRISPLD2Q9H0B8 497 aa15.78■□□□□ 0.12
C9orf3-210ENST00000462125 OSBPL3Q9H4L5 887 aa15.78■□□□□ 0.12
C9orf3-210ENST00000462125 ZNF287Q9HBT7 754 aa15.78■□□□□ 0.12
C9orf3-210ENST00000462125 NYAP2Q9P242 653 aa15.78■□□□□ 0.12
C9orf3-210ENST00000462125 ADAMTS5Q9UNA0 930 aa15.78■□□□□ 0.12
C9orf3-210ENST00000462125 RPTORQ8N122 1335 aa15.77■□□□□ 0.12
C9orf3-210ENST00000462125 IGKV6D-41A0A0C4DH26 115 aa15.77■□□□□ 0.12
C9orf3-210ENST00000462125 PTPREP23469 700 aa15.77■□□□□ 0.12
C9orf3-210ENST00000462125 MAP3K21Q5TCX8 1036 aa15.77■□□□□ 0.12
C9orf3-210ENST00000462125 B4GALNT3Q6L9W6 998 aa15.77■□□□□ 0.12
C9orf3-210ENST00000462125 SPICE1Q8N0Z3 855 aa15.77■□□□□ 0.12
C9orf3-210ENST00000462125 MB21D1Q8N884 522 aa15.77■□□□□ 0.12
C9orf3-210ENST00000462125 TRIB2Q92519 343 aa15.77■□□□□ 0.12
C9orf3-210ENST00000462125 MKL1Q969V6 931 aa15.77■□□□□ 0.12
C9orf3-210ENST00000462125 TANGO6Q9C0B7 1094 aa15.77■□□□□ 0.12
C9orf3-210ENST00000462125 HELLSQ9NRZ9 838 aa15.77■□□□□ 0.12
C9orf3-210ENST00000462125 PLXNB2O15031 1838 aa15.76■□□□□ 0.11
C9orf3-210ENST00000462125 SLC15A5A6NIM6 579 aa15.76■□□□□ 0.11
C9orf3-210ENST00000462125 RGS2P41220 211 aa15.76■□□□□ 0.11
C9orf3-210ENST00000462125 MAP2K5Q13163 448 aa15.76■□□□□ 0.11
C9orf3-210ENST00000462125 PLEKHM2Q8IWE5 1019 aa15.76■□□□□ 0.11
C9orf3-210ENST00000462125 STK11IPQ8N1F8 1099 aa15.76■□□□□ 0.11
C9orf3-210ENST00000462125 DEFB118Q96PH6 123 aa15.76■□□□□ 0.11
C9orf3-210ENST00000462125 MOV10L1Q9BXT6 1211 aaKnown RBP15.76■□□□□ 0.11
C9orf3-210ENST00000462125 NAPBQ9H115 298 aa15.76■□□□□ 0.11
C9orf3-210ENST00000462125 GOPCQ9HD26 462 aa15.76■□□□□ 0.11
C9orf3-210ENST00000462125 STRNO43815 780 aa15.75■□□□□ 0.11
C9orf3-210ENST00000462125 FLOT1O75955 427 aa15.75■□□□□ 0.11
C9orf3-210ENST00000462125 HOXC6P09630 235 aa15.75■□□□□ 0.11
C9orf3-210ENST00000462125 ATP2B2Q01814 1243 aa15.75■□□□□ 0.11
C9orf3-210ENST00000462125 PDE4BQ07343 736 aa15.75■□□□□ 0.11
C9orf3-210ENST00000462125 PPARAQ07869 468 aa15.75■□□□□ 0.11
C9orf3-210ENST00000462125 TRIM32Q13049 653 aa15.75■□□□□ 0.11
C9orf3-210ENST00000462125 GRB14Q14449 540 aa15.75■□□□□ 0.11
C9orf3-210ENST00000462125 ALX1Q15699 326 aa15.75■□□□□ 0.11
C9orf3-210ENST00000462125 SHCBP1Q8NEM2 672 aa15.75■□□□□ 0.11
C9orf3-210ENST00000462125 NEDD1Q8NHV4 660 aa15.75■□□□□ 0.11
C9orf3-210ENST00000462125 SPATC1LQ9H0A9 340 aa15.75■□□□□ 0.11
C9orf3-210ENST00000462125 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.75■□□□□ 0.111e-7■■■■■ 39.6
C9orf3-210ENST00000462125 HMX1Q9NP08 348 aaPredicted RBP15.75■□□□□ 0.11
C9orf3-210ENST00000462125 SYNPO2Q9UMS6 1093 aa15.75■□□□□ 0.11
C9orf3-210ENST00000462125 F5H6K3 240 aa15.74■□□□□ 0.11
C9orf3-210ENST00000462125 PRDM1O75626 825 aa15.74■□□□□ 0.11
C9orf3-210ENST00000462125 IGHA2P01877 340 aa15.74■□□□□ 0.11
C9orf3-210ENST00000462125 TFRCP02786 760 aaKnown RBP15.74■□□□□ 0.11
C9orf3-210ENST00000462125 SLC3A2P08195 630 aaKnown RBP15.74■□□□□ 0.11
C9orf3-210ENST00000462125 KLRC3Q07444 240 aa15.74■□□□□ 0.11
C9orf3-210ENST00000462125 MCMDC2Q4G0Z9 681 aa15.74■□□□□ 0.11
C9orf3-210ENST00000462125 CCDC129Q6ZRS4 1044 aa15.74■□□□□ 0.11
C9orf3-210ENST00000462125 ATG4CQ96DT6 458 aa15.74■□□□□ 0.11
C9orf3-210ENST00000462125 APBA2Q99767 749 aa15.74■□□□□ 0.11
C9orf3-210ENST00000462125 MTMR4Q9NYA4 1195 aa15.74■□□□□ 0.11
C9orf3-210ENST00000462125 CLIP2Q9UDT6 1046 aa15.74■□□□□ 0.11
C9orf3-210ENST00000462125 ANAPC4Q9UJX5 808 aa15.74■□□□□ 0.11
C9orf3-210ENST00000462125 RLFQ13129 1914 aa15.74■□□□□ 0.11
C9orf3-210ENST00000462125 MYH8P13535 1937 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms