RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-222ENST00000461849 STRBPQ96SI9 672 aaKnown RBP16.51■□□□□ 0.23
RBM39-222ENST00000461849 SGPL1O95470 568 aa16.5■□□□□ 0.23
RBM39-222ENST00000461849 TFRCP02786 760 aaKnown RBP16.5■□□□□ 0.23
RBM39-222ENST00000461849 APPP05067 770 aa16.5■□□□□ 0.23
RBM39-222ENST00000461849 AKR1B1P15121 316 aa16.5■□□□□ 0.23
RBM39-222ENST00000461849 GSPT1P15170 499 aaKnown RBP16.5■□□□□ 0.23
RBM39-222ENST00000461849 CAPN2P17655 700 aa16.5■□□□□ 0.23
RBM39-222ENST00000461849 GNAT2P19087 354 aa16.5■□□□□ 0.23
RBM39-222ENST00000461849 WDR78Q5VTH9 848 aa16.5■□□□□ 0.23
RBM39-222ENST00000461849 C16orf86Q6ZW13 317 aa16.5■□□□□ 0.23
RBM39-222ENST00000461849 FSD1Q9BTV5 496 aa16.5■□□□□ 0.23
RBM39-222ENST00000461849 TANGO6Q9C0B7 1094 aa16.5■□□□□ 0.23
RBM39-222ENST00000461849 GJD2Q9UKL4 321 aa16.5■□□□□ 0.23
RBM39-222ENST00000461849 DOCK3Q8IZD9 2030 aa16.5■□□□□ 0.23
RBM39-222ENST00000461849 A0A1W2PRG0 241 aa16.49■□□□□ 0.23
RBM39-222ENST00000461849 ATP2B2Q01814 1243 aa16.49■□□□□ 0.23
RBM39-222ENST00000461849 GIMAP6Q6P9H5 292 aa16.49■□□□□ 0.23
RBM39-222ENST00000461849 GPR142Q7Z601 462 aa16.49■□□□□ 0.23
RBM39-222ENST00000461849 PLEKHH3Q7Z736 793 aa16.49■□□□□ 0.23
RBM39-222ENST00000461849 LPAR1Q92633 364 aa16.49■□□□□ 0.23
RBM39-222ENST00000461849 OSBP2Q969R2 916 aa16.49■□□□□ 0.23
RBM39-222ENST00000461849 SHISA4Q96DD7 197 aa16.49■□□□□ 0.23
RBM39-222ENST00000461849 DEFB118Q96PH6 123 aa16.49■□□□□ 0.23
RBM39-222ENST00000461849 PORCNQ9H237 461 aa16.49■□□□□ 0.23
RBM39-222ENST00000461849 MKNK2Q9HBH9 465 aa16.49■□□□□ 0.23
RBM39-222ENST00000461849 HOXC10Q9NYD6 342 aa16.49■□□□□ 0.23
RBM39-222ENST00000461849 MINDY4BA8MYZ0 360 aa16.48■□□□□ 0.23
RBM39-222ENST00000461849 GPAA1O43292 621 aa16.48■□□□□ 0.23
RBM39-222ENST00000461849 RGS2P41220 211 aa16.48■□□□□ 0.23
RBM39-222ENST00000461849 TDO2P48775 406 aa16.48■□□□□ 0.23
RBM39-222ENST00000461849 COG2Q14746 738 aa16.48■□□□□ 0.23
RBM39-222ENST00000461849 TRMT44Q8IYL2 757 aaKnown RBP16.48■□□□□ 0.23
RBM39-222ENST00000461849 DPF3Q92784 378 aa16.48■□□□□ 0.23
RBM39-222ENST00000461849 HTATIP2Q9BUP3 242 aa16.48■□□□□ 0.23
RBM39-222ENST00000461849 HMX1Q9NP08 348 aaPredicted RBP16.48■□□□□ 0.23
RBM39-222ENST00000461849 IVNS1ABPQ9Y6Y0 642 aa16.48■□□□□ 0.23
RBM39-222ENST00000461849 RPTORQ8N122 1335 aa16.47■□□□□ 0.23
RBM39-222ENST00000461849 SPDYE16A6NNV3 312 aaPredicted RBP16.47■□□□□ 0.23
RBM39-222ENST00000461849 GSG1L2A8MUP6 293 aa16.47■□□□□ 0.23
RBM39-222ENST00000461849 TRIM6-TRIM34B2RNG4 842 aa16.47■□□□□ 0.23
RBM39-222ENST00000461849 RAD21O60216 631 aa16.47■□□□□ 0.23
RBM39-222ENST00000461849 XRCC5P13010 732 aaKnown RBP16.47■□□□□ 0.23
RBM39-222ENST00000461849 ZKSCAN1P17029 563 aaPredicted RBP16.47■□□□□ 0.23
RBM39-222ENST00000461849 SBK1Q52WX2 424 aa16.47■□□□□ 0.23
RBM39-222ENST00000461849 LBX2Q6XYB7 198 aa16.47■□□□□ 0.23
RBM39-222ENST00000461849 STK11IPQ8N1F8 1099 aa16.47■□□□□ 0.23
RBM39-222ENST00000461849 NACAP1Q9BZK3 213 aa16.47■□□□□ 0.23
RBM39-222ENST00000461849 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.47■□□□□ 0.235e-6■□□□□ 9.5
RBM39-222ENST00000461849 KANSL2Q9H9L4 492 aa16.47■□□□□ 0.23
RBM39-222ENST00000461849 ZNF287Q9HBT7 754 aa16.47■□□□□ 0.23
RBM39-222ENST00000461849 PAK6Q9NQU5 681 aaPredicted RBP16.47■□□□□ 0.23
RBM39-222ENST00000461849 TMX2Q9Y320 296 aa16.47■□□□□ 0.23
RBM39-222ENST00000461849 PATL2C9JE40 543 aaKnown RBP16.46■□□□□ 0.23
RBM39-222ENST00000461849 SMIM22K7EJ46 135 aa16.46■□□□□ 0.23
RBM39-222ENST00000461849 CNMDO75829 334 aa16.46■□□□□ 0.23
RBM39-222ENST00000461849 FARP2O94887 1054 aaPredicted RBP16.46■□□□□ 0.23
RBM39-222ENST00000461849 SDSP20132 328 aa16.46■□□□□ 0.23
RBM39-222ENST00000461849 CLEC10AQ8IUN9 316 aa16.46■□□□□ 0.23
RBM39-222ENST00000461849 SPICE1Q8N0Z3 855 aa16.46■□□□□ 0.23
RBM39-222ENST00000461849 TRIB2Q92519 343 aa16.46■□□□□ 0.23
RBM39-222ENST00000461849 VCPKMTQ9H867 229 aa16.46■□□□□ 0.23
RBM39-222ENST00000461849 GOPCQ9HD26 462 aa16.46■□□□□ 0.23
RBM39-222ENST00000461849 M0R2C6 588 aa16.45■□□□□ 0.22
RBM39-222ENST00000461849 WDR46O15213 610 aaKnown RBP16.45■□□□□ 0.22
RBM39-222ENST00000461849 FLOT1O75955 427 aa16.45■□□□□ 0.22
RBM39-222ENST00000461849 EEF2P13639 858 aaKnown RBP16.45■□□□□ 0.22
RBM39-222ENST00000461849 MORN1Q5T089 497 aa16.45■□□□□ 0.22
RBM39-222ENST00000461849 POTEEQ6S8J3 1075 aa16.45■□□□□ 0.22
RBM39-222ENST00000461849 SAMD1Q6SPF0 538 aaPredicted RBP16.45■□□□□ 0.22
RBM39-222ENST00000461849 ZNF444Q8N0Y2 327 aaPredicted RBP16.45■□□□□ 0.22
RBM39-222ENST00000461849 RILPL2Q969X0 211 aa16.45■□□□□ 0.22
RBM39-222ENST00000461849 APBA2Q99767 749 aa16.45■□□□□ 0.22
RBM39-222ENST00000461849 BTBD7Q9P203 1132 aa16.45■□□□□ 0.22
RBM39-222ENST00000461849 HIP1O00291 1037 aa16.44■□□□□ 0.22
RBM39-222ENST00000461849 PRKAR2AP13861 404 aaKnown RBP16.44■□□□□ 0.22
RBM39-222ENST00000461849 TRIM32Q13049 653 aa16.44■□□□□ 0.22
RBM39-222ENST00000461849 MAP2K5Q13163 448 aa16.44■□□□□ 0.22
RBM39-222ENST00000461849 PLS1Q14651 629 aa16.44■□□□□ 0.22
RBM39-222ENST00000461849 IFNL3Q8IZI9 196 aa16.44■□□□□ 0.22
RBM39-222ENST00000461849 MB21D1Q8N884 522 aa16.44■□□□□ 0.22
RBM39-222ENST00000461849 PLXNB2O15031 1838 aa16.43■□□□□ 0.22
RBM39-222ENST00000461849 SLC15A5A6NIM6 579 aa16.43■□□□□ 0.22
RBM39-222ENST00000461849 SLC3A2P08195 630 aaKnown RBP16.43■□□□□ 0.22
RBM39-222ENST00000461849 PTPREP23469 700 aa16.43■□□□□ 0.22
RBM39-222ENST00000461849 DSG3P32926 999 aa16.43■□□□□ 0.22
RBM39-222ENST00000461849 SIAH1Q8IUQ4 282 aa16.43■□□□□ 0.22
RBM39-222ENST00000461849 USP6NLQ92738 828 aa16.43■□□□□ 0.22
RBM39-222ENST00000461849 SEC62Q99442 399 aaKnown RBP16.43■□□□□ 0.22
RBM39-222ENST00000461849 SPATC1LQ9H0A9 340 aa16.43■□□□□ 0.22
RBM39-222ENST00000461849 NAPBQ9H115 298 aa16.43■□□□□ 0.22
RBM39-222ENST00000461849 RASA1P20936 1047 aa16.42■□□□□ 0.22
RBM39-222ENST00000461849 PDE4BQ07343 736 aa16.42■□□□□ 0.22
RBM39-222ENST00000461849 KIAA1755Q5JYT7 1200 aa16.42■□□□□ 0.22
RBM39-222ENST00000461849 CRISPLD2Q9H0B8 497 aa16.42■□□□□ 0.22
RBM39-222ENST00000461849 EPB41L4AQ9HCS5 686 aaPredicted RBP16.42■□□□□ 0.22
RBM39-222ENST00000461849 ROBO3Q96MS0 1386 aa16.41■□□□□ 0.22
RBM39-222ENST00000461849 STRNO43815 780 aa16.41■□□□□ 0.22
RBM39-222ENST00000461849 GRB14Q14449 540 aa16.41■□□□□ 0.22
RBM39-222ENST00000461849 CCL14Q16627 93 aa16.41■□□□□ 0.22
RBM39-222ENST00000461849 ZMYM1Q5SVZ6 1142 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms