RNA–Protein interactions for RNA: ENST00000461636.1

THUMPD3-207, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-207ENST00000461636 ATG4DQ86TL0 474 aaPredicted RBP7.97□□□□□ -1.13
THUMPD3-207ENST00000461636 RC3H2Q9HBD1 1191 aaKnown RBP7.97□□□□□ -1.13
THUMPD3-207ENST00000461636 CBX8Q9HC52 389 aa7.97□□□□□ -1.13
THUMPD3-207ENST00000461636 SAMM50Q9Y512 469 aa7.97□□□□□ -1.13
THUMPD3-207ENST00000461636 IQGAP1P46940 1657 aa7.97□□□□□ -1.13
THUMPD3-207ENST00000461636 NEXMIFQ5QGS0 1516 aa7.97□□□□□ -1.13
THUMPD3-207ENST00000461636 ANKRD30BQ9BXX2 1392 aa7.97□□□□□ -1.13
THUMPD3-207ENST00000461636 SCAF11Q99590 1463 aaKnown RBP7.96□□□□□ -1.13
THUMPD3-207ENST00000461636 KRTAP4-8A0A0G2JLE6 195 aa7.96□□□□□ -1.14
THUMPD3-207ENST00000461636 LEFTY1O75610 366 aa7.96□□□□□ -1.14
THUMPD3-207ENST00000461636 C8AP07357 584 aa7.96□□□□□ -1.14
THUMPD3-207ENST00000461636 CDK11BP21127 795 aaKnown RBP7.96□□□□□ -1.14
THUMPD3-207ENST00000461636 MAPK1P28482 360 aa7.96□□□□□ -1.14
THUMPD3-207ENST00000461636 PLCB3Q01970 1234 aa7.96□□□□□ -1.14
THUMPD3-207ENST00000461636 ENOX2Q16206 610 aaKnown RBP7.96□□□□□ -1.14
THUMPD3-207ENST00000461636 TOP6BLQ8N6T0 577 aa7.96□□□□□ -1.14
THUMPD3-207ENST00000461636 STK35Q8TDR2 534 aa7.96□□□□□ -1.14
THUMPD3-207ENST00000461636 USP35Q9P2H5 1018 aa7.96□□□□□ -1.14
THUMPD3-207ENST00000461636 GNEQ9Y223 722 aaKnown RBP7.96□□□□□ -1.14
THUMPD3-207ENST00000461636 NRXN3Q9Y4C0 1643 aa7.96□□□□□ -1.14
THUMPD3-207ENST00000461636 PPLO60437 1756 aa7.95□□□□□ -1.14
THUMPD3-207ENST00000461636 TREHO43280 583 aa7.95□□□□□ -1.14
THUMPD3-207ENST00000461636 GSTT1P30711 240 aa7.95□□□□□ -1.14
THUMPD3-207ENST00000461636 OXCT1P55809 520 aa7.95□□□□□ -1.14
THUMPD3-207ENST00000461636 AOC3Q16853 763 aa7.95□□□□□ -1.14
THUMPD3-207ENST00000461636 SND1Q7KZF4 910 aaKnown RBP eCLIP7.95□□□□□ -1.14
THUMPD3-207ENST00000461636 THEMISQ8N1K5 641 aaPredicted RBP7.95□□□□□ -1.14
THUMPD3-207ENST00000461636 PI4K2BQ8TCG2 481 aa7.95□□□□□ -1.14
THUMPD3-207ENST00000461636 GPBAR1Q8TDU6 330 aa7.95□□□□□ -1.14
THUMPD3-207ENST00000461636 CEP44Q9C0F1 390 aa7.95□□□□□ -1.14
THUMPD3-207ENST00000461636 SRCIN1Q9C0H9 1055 aa7.95□□□□□ -1.14
THUMPD3-207ENST00000461636 PICK1Q9NRD5 415 aa7.95□□□□□ -1.14
THUMPD3-207ENST00000461636 SETD1AO15047 1707 aaKnown RBP7.95□□□□□ -1.14
THUMPD3-207ENST00000461636 LTBP4Q8N2S1 1624 aa7.94□□□□□ -1.14
THUMPD3-207ENST00000461636 ITIH2P19823 946 aa7.94□□□□□ -1.14
THUMPD3-207ENST00000461636 LTKP29376 864 aa7.94□□□□□ -1.14
THUMPD3-207ENST00000461636 ZNF252P-AS1Q0IIN9 211 aa7.94□□□□□ -1.14
THUMPD3-207ENST00000461636 DSC3Q14574 896 aa7.94□□□□□ -1.14
THUMPD3-207ENST00000461636 ANGEL2Q5VTE6 544 aaKnown RBP7.94□□□□□ -1.14
THUMPD3-207ENST00000461636 FBF1Q8TES7 1133 aa7.94□□□□□ -1.14
THUMPD3-207ENST00000461636 PUS7Q96PZ0 661 aaKnown RBP7.94□□□□□ -1.14
THUMPD3-207ENST00000461636 GTF2IRD1Q9UHL9 959 aa7.94□□□□□ -1.14
THUMPD3-207ENST00000461636 PPM1HQ9ULR3 514 aa7.94□□□□□ -1.14
THUMPD3-207ENST00000461636 IVNS1ABPQ9Y6Y0 642 aa7.94□□□□□ -1.14
THUMPD3-207ENST00000461636 STRCP1A6NGW2 1772 aa7.94□□□□□ -1.14
THUMPD3-207ENST00000461636 SETBP1Q9Y6X0 1596 aa7.93□□□□□ -1.14
THUMPD3-207ENST00000461636 RNASE1P07998 156 aaKnown RBP7.93□□□□□ -1.14
THUMPD3-207ENST00000461636 JAG1P78504 1218 aa7.93□□□□□ -1.14
THUMPD3-207ENST00000461636 TPTE2Q6XPS3 522 aa7.93□□□□□ -1.14
THUMPD3-207ENST00000461636 NECAB3Q96P71 396 aaPredicted RBP7.93□□□□□ -1.14
THUMPD3-207ENST00000461636 U3KQE9 123 aa7.93□□□□□ -1.14
THUMPD3-207ENST00000461636 DHX57Q6P158 1386 aaKnown RBP7.93□□□□□ -1.14
THUMPD3-207ENST00000461636 NPHP4O75161 1426 aaPredicted RBP7.93□□□□□ -1.14
THUMPD3-207ENST00000461636 RIMS2Q9UQ26 1411 aa7.93□□□□□ -1.14
THUMPD3-207ENST00000461636 TRIM37O94972 964 aa7.92□□□□□ -1.14
THUMPD3-207ENST00000461636 C3orf58Q8NDZ4 430 aa7.92□□□□□ -1.14
THUMPD3-207ENST00000461636 FAM168AQ92567 244 aa7.92□□□□□ -1.14
THUMPD3-207ENST00000461636 MBNL3Q9NUK0 354 aaKnown RBP7.92□□□□□ -1.14
THUMPD3-207ENST00000461636 SNX11Q9Y5W9 270 aa7.92□□□□□ -1.14
THUMPD3-207ENST00000461636 PLEKHG1Q9ULL1 1385 aa7.92□□□□□ -1.14
THUMPD3-207ENST00000461636 CCDC144AA2RUR9 1427 aa7.92□□□□□ -1.14
THUMPD3-207ENST00000461636 ADAMTS13Q76LX8 1427 aa7.92□□□□□ -1.14
THUMPD3-207ENST00000461636 NWD1Q149M9 1564 aa7.92□□□□□ -1.14
THUMPD3-207ENST00000461636 CD96P40200 585 aa7.91□□□□□ -1.14
THUMPD3-207ENST00000461636 LRRC14Q15048 493 aa7.91□□□□□ -1.14
THUMPD3-207ENST00000461636 ANKLE2Q86XL3 938 aa7.91□□□□□ -1.14
THUMPD3-207ENST00000461636 TNKS2Q9H2K2 1166 aa7.91□□□□□ -1.14
THUMPD3-207ENST00000461636 PRDM10Q9NQV6 1147 aa7.91□□□□□ -1.14
THUMPD3-207ENST00000461636 CACNA2D2Q9NY47 1150 aa7.91□□□□□ -1.14
THUMPD3-207ENST00000461636 ADAMTS6Q9UKP5 1117 aa7.91□□□□□ -1.14
THUMPD3-207ENST00000461636 NRXN1Q9ULB1 1477 aa7.91□□□□□ -1.14
THUMPD3-207ENST00000461636 DIP2AQ14689 1571 aa7.91□□□□□ -1.14
THUMPD3-207ENST00000461636 CHD2O14647 1828 aaKnown RBP7.9□□□□□ -1.14
THUMPD3-207ENST00000461636 IGF2BP3O00425 579 aaKnown RBP eCLIP7.9□□□□□ -1.14
THUMPD3-207ENST00000461636 FANCGO15287 622 aa7.9□□□□□ -1.14
THUMPD3-207ENST00000461636 PPM1JQ5JR12 505 aa7.9□□□□□ -1.14
THUMPD3-207ENST00000461636 SCARA3Q6AZY7 606 aa7.9□□□□□ -1.14
THUMPD3-207ENST00000461636 LLGL2Q6P1M3 1020 aa7.9□□□□□ -1.14
THUMPD3-207ENST00000461636 SLC23A3Q6PIS1 610 aa7.9□□□□□ -1.14
THUMPD3-207ENST00000461636 ZSCAN29Q8IWY8 852 aaPredicted RBP7.9□□□□□ -1.14
THUMPD3-207ENST00000461636 KCT2Q8NC54 265 aa7.9□□□□□ -1.14
THUMPD3-207ENST00000461636 LRRN4CLQ8ND94 238 aa7.9□□□□□ -1.14
THUMPD3-207ENST00000461636 ASB11Q8WXH4 323 aa7.9□□□□□ -1.14
THUMPD3-207ENST00000461636 PLAGL2Q9UPG8 496 aa7.9□□□□□ -1.14
THUMPD3-207ENST00000461636 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.9□□□□□ -1.14
THUMPD3-207ENST00000461636 MYOM2P54296 1465 aa7.89□□□□□ -1.15
THUMPD3-207ENST00000461636 PRAG1Q86YV5 1406 aa7.89□□□□□ -1.15
THUMPD3-207ENST00000461636 ARID1BQ8NFD5 2236 aaPredicted RBP7.89□□□□□ -1.15
THUMPD3-207ENST00000461636 ENC1O14682 589 aa7.89□□□□□ -1.15
THUMPD3-207ENST00000461636 GIPC1O14908 333 aa7.89□□□□□ -1.15
THUMPD3-207ENST00000461636 MAPK8P45983 427 aa7.89□□□□□ -1.15
THUMPD3-207ENST00000461636 CDC37L1Q7L3B6 337 aa7.89□□□□□ -1.15
THUMPD3-207ENST00000461636 CSADQ9Y600 493 aa7.89□□□□□ -1.15
THUMPD3-207ENST00000461636 XIRP1Q702N8 1843 aaKnown RBP7.89□□□□□ -1.15
THUMPD3-207ENST00000461636 XRN1Q8IZH2 1706 aaKnown RBP7.89□□□□□ -1.15
THUMPD3-207ENST00000461636 RPGRIP1LQ68CZ1 1315 aa7.88□□□□□ -1.15
THUMPD3-207ENST00000461636 GNAT3A8MTJ3 354 aa7.88□□□□□ -1.15
THUMPD3-207ENST00000461636 DCDC2CA8MYV0 355 aa7.88□□□□□ -1.15
THUMPD3-207ENST00000461636 FARP2O94887 1054 aaPredicted RBP7.88□□□□□ -1.15
THUMPD3-207ENST00000461636 ATP2B2Q01814 1243 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms