RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 B4GALNT3Q6L9W6 998 aa7.38□□□□□ -1.23
SPTA1-202ENST00000461624 IGF2-ASQ6U949 168 aa7.38□□□□□ -1.23
SPTA1-202ENST00000461624 DNAJC10Q8IXB1 793 aa7.38□□□□□ -1.23
SPTA1-202ENST00000461624 COL26A1Q96A83 441 aa7.38□□□□□ -1.23
SPTA1-202ENST00000461624 TESK2Q96S53 571 aa7.38□□□□□ -1.23
SPTA1-202ENST00000461624 SMG9Q9H0W8 520 aaKnown RBP7.38□□□□□ -1.23
SPTA1-202ENST00000461624 SRA1Q9HD15 236 aaKnown RBP7.38□□□□□ -1.23
SPTA1-202ENST00000461624 ZFP64Q9NPA5 681 aa7.38□□□□□ -1.23
SPTA1-202ENST00000461624 ZNF277Q9NRM2 450 aaPredicted RBP7.38□□□□□ -1.23
SPTA1-202ENST00000461624 SAGE1Q9NXZ1 904 aa7.38□□□□□ -1.23
SPTA1-202ENST00000461624 ZBTB1Q9Y2K1 713 aa7.38□□□□□ -1.23
SPTA1-202ENST00000461624 RBBP6Q7Z6E9 1792 aaKnown RBP7.38□□□□□ -1.23
SPTA1-202ENST00000461624 LAMA2P24043 3122 aaKnown RBP7.37□□□□□ -1.23
SPTA1-202ENST00000461624 PSAPP07602 524 aa7.37□□□□□ -1.23
SPTA1-202ENST00000461624 COX20Q5RI15 118 aa7.37□□□□□ -1.23
SPTA1-202ENST00000461624 CTU1Q7Z7A3 348 aaKnown RBP7.37□□□□□ -1.23
SPTA1-202ENST00000461624 RGL4Q8IZJ4 473 aa7.37□□□□□ -1.23
SPTA1-202ENST00000461624 WFDC12Q8WWY7 111 aa7.37□□□□□ -1.23
SPTA1-202ENST00000461624 FAM155AB1AL88 458 aaPredicted RBP7.36□□□□□ -1.23
SPTA1-202ENST00000461624 PRMT3O60678 531 aa7.36□□□□□ -1.23
SPTA1-202ENST00000461624 HSP90AB1P08238 724 aaKnown RBP7.36□□□□□ -1.23
SPTA1-202ENST00000461624 EPS15P42566 896 aa7.36□□□□□ -1.23
SPTA1-202ENST00000461624 CABP4P57796 275 aa7.36□□□□□ -1.23
SPTA1-202ENST00000461624 NOGQ13253 232 aa7.36□□□□□ -1.23
SPTA1-202ENST00000461624 LRP8Q14114 963 aa7.36□□□□□ -1.23
SPTA1-202ENST00000461624 CCDC93Q567U6 631 aa7.36□□□□□ -1.23
SPTA1-202ENST00000461624 TBC1D9BQ66K14 1250 aa7.36□□□□□ -1.23
SPTA1-202ENST00000461624 OLFM4Q6UX06 510 aa7.36□□□□□ -1.23
SPTA1-202ENST00000461624 CMTR1Q8N1G2 835 aaKnown RBP7.36□□□□□ -1.23
SPTA1-202ENST00000461624 PLD4Q96BZ4 506 aa7.36□□□□□ -1.23
SPTA1-202ENST00000461624 PSMG3-AS1Q96PY0 264 aa7.36□□□□□ -1.23
SPTA1-202ENST00000461624 KCNMB2Q9Y691 235 aa7.36□□□□□ -1.23
SPTA1-202ENST00000461624 KLRG2A4D1S0 409 aaPredicted RBP7.35□□□□□ -1.23
SPTA1-202ENST00000461624 DEAF1O75398 565 aaPredicted RBP7.35□□□□□ -1.23
SPTA1-202ENST00000461624 CELF2O95319 508 aaKnown RBP7.35□□□□□ -1.23
SPTA1-202ENST00000461624 GHRHP01286 108 aa7.35□□□□□ -1.23
SPTA1-202ENST00000461624 BRD2P25440 801 aaKnown RBP7.35□□□□□ -1.23
SPTA1-202ENST00000461624 NOS3P29474 1203 aa7.35□□□□□ -1.23
SPTA1-202ENST00000461624 IARSP41252 1262 aaKnown RBP7.35□□□□□ -1.23
SPTA1-202ENST00000461624 EIF5P55010 431 aaKnown RBP7.35□□□□□ -1.23
SPTA1-202ENST00000461624 OCLNQ16625 522 aa7.35□□□□□ -1.23
SPTA1-202ENST00000461624 C16orf46Q6P387 395 aa7.35□□□□□ -1.23
SPTA1-202ENST00000461624 HFE2Q6ZVN8 426 aa7.35□□□□□ -1.23
SPTA1-202ENST00000461624 USP50Q70EL3 339 aaPredicted RBP7.35□□□□□ -1.23
SPTA1-202ENST00000461624 MAP4K3Q8IVH8 894 aa7.35□□□□□ -1.23
SPTA1-202ENST00000461624 CACTIN-AS1Q8N1I8 211 aa7.35□□□□□ -1.23
SPTA1-202ENST00000461624 RETREG2Q8NC44 543 aa7.35□□□□□ -1.23
SPTA1-202ENST00000461624 MASTLQ96GX5 879 aa7.35□□□□□ -1.23
SPTA1-202ENST00000461624 RBSNQ9H1K0 784 aa7.35□□□□□ -1.23
SPTA1-202ENST00000461624 FAM13BQ9NYF5 915 aa7.35□□□□□ -1.23
SPTA1-202ENST00000461624 PGAP2Q9UHJ9 254 aa7.35□□□□□ -1.23
SPTA1-202ENST00000461624 USP20Q9Y2K6 914 aa7.35□□□□□ -1.23
SPTA1-202ENST00000461624 MUC3AQ02505 3323 aa7.35□□□□□ -1.23
SPTA1-202ENST00000461624 PRUNE2Q8WUY3 3088 aa7.34□□□□□ -1.23
SPTA1-202ENST00000461624 MMP20O60882 483 aa7.34□□□□□ -1.23
SPTA1-202ENST00000461624 ATP2B4P23634 1241 aa7.34□□□□□ -1.23
SPTA1-202ENST00000461624 IREB2P48200 963 aaKnown RBP7.34□□□□□ -1.23
SPTA1-202ENST00000461624 PRIMPOLQ96LW4 560 aa7.34□□□□□ -1.23
SPTA1-202ENST00000461624 RNF186Q9NXI6 227 aa7.34□□□□□ -1.23
SPTA1-202ENST00000461624 CXXC1Q9P0U4 656 aaPredicted RBP7.34□□□□□ -1.23
SPTA1-202ENST00000461624 EIF4A2Q14240 407 aaKnown RBP7.33□□□□□ -1.24
SPTA1-202ENST00000461624 ZNF530Q6P9A1 599 aaPredicted RBP7.33□□□□□ -1.24
SPTA1-202ENST00000461624 HOMEZQ8IX15 550 aa7.33□□□□□ -1.24
SPTA1-202ENST00000461624 ETFBKMTQ8IXQ9 262 aa7.33□□□□□ -1.24
SPTA1-202ENST00000461624 GLIS2Q9BZE0 524 aaPredicted RBP7.33□□□□□ -1.24
SPTA1-202ENST00000461624 MRPL18Q9H0U6 180 aaKnown RBP7.33□□□□□ -1.24
SPTA1-202ENST00000461624 MTMR7Q9Y216 660 aa7.33□□□□□ -1.24
SPTA1-202ENST00000461624 EYSQ5T1H1 3165 aa7.33□□□□□ -1.24
SPTA1-202ENST00000461624 TRPA1O75762 1119 aa7.32□□□□□ -1.24
SPTA1-202ENST00000461624 AKAP4Q5JQC9 854 aa7.32□□□□□ -1.24
SPTA1-202ENST00000461624 NBPF11Q86T75 865 aa7.32□□□□□ -1.24
SPTA1-202ENST00000461624 RTKN2Q8IZC4 609 aa7.32□□□□□ -1.24
SPTA1-202ENST00000461624 SYNE4Q8N205 404 aa7.32□□□□□ -1.24
SPTA1-202ENST00000461624 CNBD1Q8NA66 436 aa7.32□□□□□ -1.24
SPTA1-202ENST00000461624 MEGF10Q96KG7 1140 aa7.32□□□□□ -1.24
SPTA1-202ENST00000461624 NSUN5Q96P11 429 aaKnown RBP7.32□□□□□ -1.24
SPTA1-202ENST00000461624 PSMD1Q99460 953 aa7.32□□□□□ -1.24
SPTA1-202ENST00000461624 MUC3BQ9H195 1237 aa7.32□□□□□ -1.24
SPTA1-202ENST00000461624 PAPPA2Q9BXP8 1791 aa7.32□□□□□ -1.24
SPTA1-202ENST00000461624 ST20-MTHFSA0A0A6YYL1 179 aa7.31□□□□□ -1.24
SPTA1-202ENST00000461624 J3QW42 95 aa7.31□□□□□ -1.24
SPTA1-202ENST00000461624 NPR1P16066 1061 aa7.31□□□□□ -1.24
SPTA1-202ENST00000461624 MTHFSP49914 203 aa7.31□□□□□ -1.24
SPTA1-202ENST00000461624 HUNKP57058 714 aa7.31□□□□□ -1.24
SPTA1-202ENST00000461624 TRIP4Q15650 581 aaPredicted RBP7.31□□□□□ -1.24
SPTA1-202ENST00000461624 PKN2Q16513 984 aaKnown RBP7.31□□□□□ -1.24
SPTA1-202ENST00000461624 TMEM130Q8N3G9 435 aa7.31□□□□□ -1.24
SPTA1-202ENST00000461624 IL22RA1Q8N6P7 574 aa7.31□□□□□ -1.24
SPTA1-202ENST00000461624 AKTIPQ9H8T0 292 aa7.31□□□□□ -1.24
SPTA1-202ENST00000461624 ADARB2Q9NS39 739 aaKnown RBP7.31□□□□□ -1.24
SPTA1-202ENST00000461624 GPRC5DQ9NZD1 345 aa7.31□□□□□ -1.24
SPTA1-202ENST00000461624 POLKQ9UBT6 870 aa7.31□□□□□ -1.24
SPTA1-202ENST00000461624 POLR2AP24928 1970 aaKnown RBP7.31□□□□□ -1.24
SPTA1-202ENST00000461624 PITPNM2Q9BZ72 1349 aa7.3□□□□□ -1.24
SPTA1-202ENST00000461624 CAMTA2O94983 1202 aa7.3□□□□□ -1.24
SPTA1-202ENST00000461624 KIF23Q02241 960 aaPredicted RBP7.3□□□□□ -1.24
SPTA1-202ENST00000461624 PLEKHO1Q53GL0 409 aaPredicted RBP7.3□□□□□ -1.24
SPTA1-202ENST00000461624 GDF6Q6KF10 455 aaPredicted RBP7.3□□□□□ -1.24
SPTA1-202ENST00000461624 RGMBQ6NW40 437 aa7.3□□□□□ -1.24
SPTA1-202ENST00000461624 PRR23CQ6ZRP0 262 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms