RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 TANGO6Q9C0B7 1094 aa12.55□□□□□ -0.4
TRAPPC12-213ENST00000461577 VCPKMTQ9H867 229 aa12.55□□□□□ -0.4
TRAPPC12-213ENST00000461577 INCENPQ9NQS7 918 aa12.55□□□□□ -0.4
TRAPPC12-213ENST00000461577 NYAP2Q9P242 653 aa12.55□□□□□ -0.4
TRAPPC12-213ENST00000461577 CTNNA3Q9UI47 895 aa12.55□□□□□ -0.4
TRAPPC12-213ENST00000461577 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRAPPC12-213ENST00000461577 ZSWIM8A7E2V4 1837 aa12.55□□□□□ -0.4
TRAPPC12-213ENST00000461577 LAMA4Q16363 1823 aa12.54□□□□□ -0.4
TRAPPC12-213ENST00000461577 IGKV6D-41A0A0C4DH26 115 aa12.54□□□□□ -0.4
TRAPPC12-213ENST00000461577 ORC4O43929 436 aa12.54□□□□□ -0.4
TRAPPC12-213ENST00000461577 GNRH1P01148 92 aa12.54□□□□□ -0.4
TRAPPC12-213ENST00000461577 HOXD10P28358 340 aa12.54□□□□□ -0.4
TRAPPC12-213ENST00000461577 FCGRTP55899 365 aa12.54□□□□□ -0.4
TRAPPC12-213ENST00000461577 FAM110CQ1W6H9 321 aa12.54□□□□□ -0.4
TRAPPC12-213ENST00000461577 PPP4R3BQ5MIZ7 849 aa12.54□□□□□ -0.4
TRAPPC12-213ENST00000461577 MFSD6Q6ZSS7 791 aa12.54□□□□□ -0.4
TRAPPC12-213ENST00000461577 SPICE1Q8N0Z3 855 aa12.54□□□□□ -0.4
TRAPPC12-213ENST00000461577 CEP95Q96GE4 821 aa12.54□□□□□ -0.4
TRAPPC12-213ENST00000461577 ARHGAP39Q9C0H5 1083 aa12.54□□□□□ -0.4
TRAPPC12-213ENST00000461577 RNF41Q9H4P4 317 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC12-213ENST00000461577 CLIP2Q9UDT6 1046 aa12.54□□□□□ -0.4
TRAPPC12-213ENST00000461577 PLIN4Q96Q06 1357 aa12.54□□□□□ -0.4
TRAPPC12-213ENST00000461577 WDR46O15213 610 aaKnown RBP12.53□□□□□ -0.4
TRAPPC12-213ENST00000461577 CAPN15O75808 1086 aa12.53□□□□□ -0.4
TRAPPC12-213ENST00000461577 TTLL1O95922 423 aa12.53□□□□□ -0.4
TRAPPC12-213ENST00000461577 PCP11498 1178 aaKnown RBP12.53□□□□□ -0.4
TRAPPC12-213ENST00000461577 CAP1Q01518 475 aa12.53□□□□□ -0.4
TRAPPC12-213ENST00000461577 IMMTQ16891 758 aaKnown RBP12.53□□□□□ -0.4
TRAPPC12-213ENST00000461577 BMP2KLQ5H9B9 411 aa12.53□□□□□ -0.4
TRAPPC12-213ENST00000461577 KIAA1755Q5JYT7 1200 aa12.53□□□□□ -0.4
TRAPPC12-213ENST00000461577 AKNAD1Q5T1N1 836 aa12.53□□□□□ -0.4
TRAPPC12-213ENST00000461577 STAG1Q8WVM7 1258 aa12.53□□□□□ -0.4
TRAPPC12-213ENST00000461577 PAGR1Q9BTK6 254 aa12.53□□□□□ -0.4
TRAPPC12-213ENST00000461577 IL25Q9H293 177 aa12.53□□□□□ -0.4
TRAPPC12-213ENST00000461577 MTMR4Q9NYA4 1195 aa12.53□□□□□ -0.4
TRAPPC12-213ENST00000461577 PTPN22Q9Y2R2 807 aa12.53□□□□□ -0.4
TRAPPC12-213ENST00000461577 CCDC85CA6NKD9 419 aa12.52□□□□□ -0.41
TRAPPC12-213ENST00000461577 TNPO2O14787 897 aaKnown RBP12.52□□□□□ -0.41
TRAPPC12-213ENST00000461577 SGSM2O43147 1006 aa12.52□□□□□ -0.41
TRAPPC12-213ENST00000461577 FGRP09769 529 aa12.52□□□□□ -0.41
TRAPPC12-213ENST00000461577 PRMT2P55345 433 aa12.52□□□□□ -0.41
TRAPPC12-213ENST00000461577 COG2Q14746 738 aa12.52□□□□□ -0.41
TRAPPC12-213ENST00000461577 IFFO2Q5TF58 517 aa12.52□□□□□ -0.41
TRAPPC12-213ENST00000461577 SAMD1Q6SPF0 538 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC12-213ENST00000461577 KIAA1211Q6ZU35 1233 aa12.52□□□□□ -0.41
TRAPPC12-213ENST00000461577 TBC1D10CQ8IV04 446 aa12.52□□□□□ -0.41
TRAPPC12-213ENST00000461577 CCAR1Q8IX12 1150 aaKnown RBP12.52□□□□□ -0.41
TRAPPC12-213ENST00000461577 GPRC5AQ8NFJ5 357 aa12.52□□□□□ -0.41
TRAPPC12-213ENST00000461577 TRIM47Q96LD4 638 aa12.52□□□□□ -0.41
TRAPPC12-213ENST00000461577 HOXC10Q9NYD6 342 aa12.52□□□□□ -0.41
TRAPPC12-213ENST00000461577 MORF4L1Q9UBU8 362 aa12.52□□□□□ -0.41
TRAPPC12-213ENST00000461577 HPS5Q9UPZ3 1129 aa12.52□□□□□ -0.41
TRAPPC12-213ENST00000461577 TACC3Q9Y6A5 838 aa12.52□□□□□ -0.41
TRAPPC12-213ENST00000461577 F5H6K3 240 aa12.51□□□□□ -0.41
TRAPPC12-213ENST00000461577 FLOT1O75955 427 aa12.51□□□□□ -0.41
TRAPPC12-213ENST00000461577 CTGFP29279 349 aa12.51□□□□□ -0.41
TRAPPC12-213ENST00000461577 ERVK-9P63128 1117 aa12.51□□□□□ -0.41
TRAPPC12-213ENST00000461577 ERVK-24P63145 666 aa12.51□□□□□ -0.41
TRAPPC12-213ENST00000461577 KLRC3Q07444 240 aa12.51□□□□□ -0.41
TRAPPC12-213ENST00000461577 CASC1Q6TDU7 716 aa12.51□□□□□ -0.41
TRAPPC12-213ENST00000461577 LRRC47Q8N1G4 583 aaKnown RBP12.51□□□□□ -0.41
TRAPPC12-213ENST00000461577 MKL1Q969V6 931 aa12.51□□□□□ -0.41
TRAPPC12-213ENST00000461577 COA7Q96BR5 231 aa12.51□□□□□ -0.41
TRAPPC12-213ENST00000461577 CWC22Q9HCG8 908 aaKnown RBP12.51□□□□□ -0.41
TRAPPC12-213ENST00000461577 RBPJLQ9UBG7 517 aa12.51□□□□□ -0.41
TRAPPC12-213ENST00000461577 SRRDQ9UH36 339 aa12.51□□□□□ -0.41
TRAPPC12-213ENST00000461577 STX8Q9UNK0 236 aa12.51□□□□□ -0.41
TRAPPC12-213ENST00000461577 RABGAP1Q9Y3P9 1069 aa12.51□□□□□ -0.41
TRAPPC12-213ENST00000461577 U3KPZ7 1027 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC12-213ENST00000461577 MYPNQ86TC9 1320 aa12.51□□□□□ -0.41
TRAPPC12-213ENST00000461577 SPDYE16A6NNV3 312 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC12-213ENST00000461577 NDUFB10O96000 172 aa12.5□□□□□ -0.41
TRAPPC12-213ENST00000461577 DSG3P32926 999 aa12.5□□□□□ -0.41
TRAPPC12-213ENST00000461577 NT5C2P49902 561 aa12.5□□□□□ -0.41
TRAPPC12-213ENST00000461577 CCNA1P78396 465 aa12.5□□□□□ -0.41
TRAPPC12-213ENST00000461577 PTH1RQ03431 593 aa12.5□□□□□ -0.41
TRAPPC12-213ENST00000461577 FAM83BQ5T0W9 1011 aa12.5□□□□□ -0.41
TRAPPC12-213ENST00000461577 SLFN13Q68D06 897 aa12.5□□□□□ -0.41
TRAPPC12-213ENST00000461577 LBX2Q6XYB7 198 aa12.5□□□□□ -0.41
TRAPPC12-213ENST00000461577 RAET1EQ8TD07 263 aa12.5□□□□□ -0.41
TRAPPC12-213ENST00000461577 ESR2Q92731 530 aa12.5□□□□□ -0.41
TRAPPC12-213ENST00000461577 ESYT1Q9BSJ8 1104 aa12.5□□□□□ -0.41
TRAPPC12-213ENST00000461577 NBPF3Q9H094 633 aa12.5□□□□□ -0.41
TRAPPC12-213ENST00000461577 TXNRD2Q9NNW7 524 aa12.5□□□□□ -0.41
TRAPPC12-213ENST00000461577 ISY1Q9ULR0 285 aaKnown RBP12.5□□□□□ -0.41
TRAPPC12-213ENST00000461577 SYNPO2Q9UMS6 1093 aa12.5□□□□□ -0.41
TRAPPC12-213ENST00000461577 PTCH2Q9Y6C5 1203 aa12.5□□□□□ -0.41
TRAPPC12-213ENST00000461577 NEDD4P46934 1319 aa12.49□□□□□ -0.41
TRAPPC12-213ENST00000461577 NMT2O60551 498 aa12.49□□□□□ -0.41
TRAPPC12-213ENST00000461577 PEX10O60683 326 aa12.49□□□□□ -0.41
TRAPPC12-213ENST00000461577 CDC45O75419 566 aa12.49□□□□□ -0.41
TRAPPC12-213ENST00000461577 MAPK4P31152 587 aa12.49□□□□□ -0.41
TRAPPC12-213ENST00000461577 Q3C1V9 767 aa12.49□□□□□ -0.41
TRAPPC12-213ENST00000461577 MB21D1Q8N884 522 aa12.49□□□□□ -0.41
TRAPPC12-213ENST00000461577 GMCL1P1Q8NEA9 526 aa12.49□□□□□ -0.41
TRAPPC12-213ENST00000461577 NUP88Q99567 741 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC12-213ENST00000461577 KRT23Q9C075 422 aa12.49□□□□□ -0.41
TRAPPC12-213ENST00000461577 CNNM2Q9H8M5 875 aa12.49□□□□□ -0.41
TRAPPC12-213ENST00000461577 IL17RBQ9NRM6 502 aa12.49□□□□□ -0.41
TRAPPC12-213ENST00000461577 TCP11L1Q9NUJ3 509 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms