RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 SLC30A3Q99726 388 aa6.55□□□□□ -1.36
BRCA1-206ENST00000461574 PNNQ9H307 717 aaKnown RBP6.55□□□□□ -1.36
BRCA1-206ENST00000461574 MYOZ2Q9NPC6 264 aa6.55□□□□□ -1.36
BRCA1-206ENST00000461574 KCNQ5Q9NR82 932 aa6.55□□□□□ -1.36
BRCA1-206ENST00000461574 POLLQ9UGP5 575 aa6.55□□□□□ -1.36
BRCA1-206ENST00000461574 FAM229AH3BQW9 127 aa6.54□□□□□ -1.36
BRCA1-206ENST00000461574 SIN3BO75182 1162 aa6.54□□□□□ -1.36
BRCA1-206ENST00000461574 VIL1P09327 827 aaKnown RBP6.54□□□□□ -1.36
BRCA1-206ENST00000461574 NCOA4Q13772 614 aa6.54□□□□□ -1.36
BRCA1-206ENST00000461574 COL9A3Q14050 684 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-206ENST00000461574 MCM6Q14566 821 aa6.54□□□□□ -1.36
BRCA1-206ENST00000461574 RSPO4Q2I0M5 234 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-206ENST00000461574 INTS3Q68E01 1043 aaKnown RBP6.54□□□□□ -1.36
BRCA1-206ENST00000461574 C8orf86Q6ZUL3 223 aa6.54□□□□□ -1.36
BRCA1-206ENST00000461574 OGFOD1Q8N543 542 aa6.54□□□□□ -1.36
BRCA1-206ENST00000461574 AGBL3Q8NEM8 1001 aa6.54□□□□□ -1.36
BRCA1-206ENST00000461574 FAM89AQ96GI7 184 aa6.54□□□□□ -1.36
BRCA1-206ENST00000461574 ZNF232Q9UNY5 417 aa6.54□□□□□ -1.36
BRCA1-206ENST00000461574 SCAF8Q9UPN6 1271 aaKnown RBP6.54□□□□□ -1.36
BRCA1-206ENST00000461574 STARD13Q9Y3M8 1113 aa6.54□□□□□ -1.36
BRCA1-206ENST00000461574 TRIM17Q9Y577 477 aa6.54□□□□□ -1.36
BRCA1-206ENST00000461574 COL4A1P02462 1669 aa6.54□□□□□ -1.36
BRCA1-206ENST00000461574 BRCA2P51587 3418 aa6.53□□□□□ -1.36
BRCA1-206ENST00000461574 ZNF609O15014 1411 aa6.53□□□□□ -1.36
BRCA1-206ENST00000461574 MYH3P11055 1940 aa6.53□□□□□ -1.36
BRCA1-206ENST00000461574 USP17L3A6NCW0 530 aa6.53□□□□□ -1.36
BRCA1-206ENST00000461574 USP17L4A6NCW7 530 aa6.53□□□□□ -1.36
BRCA1-206ENST00000461574 ADARB2-AS1A8MUL3 147 aa6.53□□□□□ -1.36
BRCA1-206ENST00000461574 M0R082 166 aa6.53□□□□□ -1.36
BRCA1-206ENST00000461574 IRS4O14654 1257 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-206ENST00000461574 HSP90B1P14625 803 aaKnown RBP6.53□□□□□ -1.36
BRCA1-206ENST00000461574 TM4SF4P48230 202 aa6.53□□□□□ -1.36
BRCA1-206ENST00000461574 ZNF280AP59817 542 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-206ENST00000461574 RPS8P62241 208 aaKnown RBP6.53□□□□□ -1.36
BRCA1-206ENST00000461574 LMOD3Q0VAK6 560 aa6.53□□□□□ -1.36
BRCA1-206ENST00000461574 PRKG1Q13976 671 aa6.53□□□□□ -1.36
BRCA1-206ENST00000461574 SF3B3Q15393 1217 aaKnown RBP6.53□□□□□ -1.36
BRCA1-206ENST00000461574 NOM1Q5C9Z4 860 aaKnown RBP6.53□□□□□ -1.36
BRCA1-206ENST00000461574 PRRT3Q5FWE3 981 aa6.53□□□□□ -1.36
BRCA1-206ENST00000461574 NKAPLQ5M9Q1 402 aa6.53□□□□□ -1.36
BRCA1-206ENST00000461574 PRAMEF18Q5VWM3 479 aa6.53□□□□□ -1.36
BRCA1-206ENST00000461574 USP17L1Q7RTZ2 530 aa6.53□□□□□ -1.36
BRCA1-206ENST00000461574 ARMC9Q7Z3E5 817 aa6.53□□□□□ -1.36
BRCA1-206ENST00000461574 LRP10Q7Z4F1 713 aa6.53□□□□□ -1.36
BRCA1-206ENST00000461574 DEPDC4Q8N2C3 294 aa6.53□□□□□ -1.36
BRCA1-206ENST00000461574 ZNF417Q8TAU3 575 aa6.53□□□□□ -1.36
BRCA1-206ENST00000461574 PSMG3-AS1Q96PY0 264 aa6.53□□□□□ -1.36
BRCA1-206ENST00000461574 ZNF587Q96SQ5 575 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-206ENST00000461574 ALG2Q9H553 416 aa6.53□□□□□ -1.36
BRCA1-206ENST00000461574 NEUROD4Q9HD90 331 aa6.53□□□□□ -1.36
BRCA1-206ENST00000461574 TPSG1Q9NRR2 321 aa6.53□□□□□ -1.36
BRCA1-206ENST00000461574 ECM29Q5VYK3 1845 aa6.53□□□□□ -1.36
BRCA1-206ENST00000461574 SPDYE3A6NKU9 549 aa6.52□□□□□ -1.37
BRCA1-206ENST00000461574 LZTS3O60299 673 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-206ENST00000461574 ALBP02768 609 aa6.52□□□□□ -1.37
BRCA1-206ENST00000461574 FOXD4L6Q3SYB3 417 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-206ENST00000461574 HDGFL1Q5TGJ6 251 aa6.52□□□□□ -1.37
BRCA1-206ENST00000461574 FOXD4L3Q6VB84 417 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-206ENST00000461574 RAB44Q7Z6P3 723 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-206ENST00000461574 PLBD2Q8NHP8 589 aa6.52□□□□□ -1.37
BRCA1-206ENST00000461574 TNFRSF25Q93038 417 aa6.52□□□□□ -1.37
BRCA1-206ENST00000461574 PODXL2Q9NZ53 605 aa6.52□□□□□ -1.37
BRCA1-206ENST00000461574 CHPF2Q9P2E5 772 aa6.52□□□□□ -1.37
BRCA1-206ENST00000461574 COG6Q9Y2V7 657 aa6.52□□□□□ -1.37
BRCA1-206ENST00000461574 LAS1LQ9Y4W2 734 aaKnown RBP6.52□□□□□ -1.37
BRCA1-206ENST00000461574 LAMB1P07942 1786 aa6.52□□□□□ -1.37
BRCA1-206ENST00000461574 XDHP47989 1333 aa6.51□□□□□ -1.37
BRCA1-206ENST00000461574 CEP290O15078 2479 aa6.51□□□□□ -1.37
BRCA1-206ENST00000461574 SERTM1A2A2V5 107 aa6.51□□□□□ -1.37
BRCA1-206ENST00000461574 MANSC4A6NHS7 340 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-206ENST00000461574 SASH1O94885 1247 aa6.51□□□□□ -1.37
BRCA1-206ENST00000461574 FXR1P51114 621 aaKnown RBP eCLIP6.51□□□□□ -1.37
BRCA1-206ENST00000461574 RIPK4P57078 832 aa6.51□□□□□ -1.37
BRCA1-206ENST00000461574 SPEM2Q0P670 501 aa6.51□□□□□ -1.37
BRCA1-206ENST00000461574 NBPF9Q3BBW0 867 aa6.51□□□□□ -1.37
BRCA1-206ENST00000461574 CCDC152Q4G0S7 254 aa6.51□□□□□ -1.37
BRCA1-206ENST00000461574 OTOP1Q7RTM1 612 aa6.51□□□□□ -1.37
BRCA1-206ENST00000461574 APOBEC3FQ8IUX4 373 aaKnown RBP6.51□□□□□ -1.37
BRCA1-206ENST00000461574 MICALL1Q8N3F8 863 aa6.51□□□□□ -1.37
BRCA1-206ENST00000461574 RHPN1Q8TCX5 695 aa6.51□□□□□ -1.37
BRCA1-206ENST00000461574 ERO1AQ96HE7 468 aa6.51□□□□□ -1.37
BRCA1-206ENST00000461574 BABAM1Q9NWV8 329 aa6.51□□□□□ -1.37
BRCA1-206ENST00000461574 DBF4Q9UBU7 674 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-206ENST00000461574 ANGEL1Q9UNK9 670 aaKnown RBP6.51□□□□□ -1.37
BRCA1-206ENST00000461574 GPC6Q9Y625 555 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-206ENST00000461574 A0A0C4DFX4 3053 aa6.51□□□□□ -1.37
BRCA1-206ENST00000461574 MYO3BQ8WXR4 1341 aa6.5□□□□□ -1.37
BRCA1-206ENST00000461574 ZNF646O15015 1829 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-206ENST00000461574 KIAA0100Q14667 2235 aaKnown RBP6.5□□□□□ -1.37
BRCA1-206ENST00000461574 COL1A1P02452 1464 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-206ENST00000461574 USP17L5A8MUK1 530 aa6.5□□□□□ -1.37
BRCA1-206ENST00000461574 ATP2B4P23634 1241 aa6.5□□□□□ -1.37
BRCA1-206ENST00000461574 ADH7P40394 386 aa6.5□□□□□ -1.37
BRCA1-206ENST00000461574 INHBEP58166 350 aa6.5□□□□□ -1.37
BRCA1-206ENST00000461574 PTPN12Q05209 780 aaKnown RBP6.5□□□□□ -1.37
BRCA1-206ENST00000461574 GRIK4Q16099 956 aa6.5□□□□□ -1.37
BRCA1-206ENST00000461574 OTUD7BQ6GQQ9 843 aa6.5□□□□□ -1.37
BRCA1-206ENST00000461574 ANKRD18AQ8IVF6 992 aa6.5□□□□□ -1.37
BRCA1-206ENST00000461574 HSH2DQ96JZ2 352 aa6.5□□□□□ -1.37
BRCA1-206ENST00000461574 PLEKHF1Q96S99 279 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms