RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 KRT2P35908 639 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 MLLT3P42568 568 aaPredicted RBP7.84□□□□□ -1.15
MSH2-204ENST00000461394 NASPP49321 788 aaPredicted RBP7.84□□□□□ -1.15
MSH2-204ENST00000461394 GNAQP50148 359 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 CACNB3P54284 484 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 CFAP100Q494V2 611 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 DALRD3Q5D0E6 543 aaKnown RBP7.84□□□□□ -1.15
MSH2-204ENST00000461394 ANO1Q5XXA6 986 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 TMTC3Q6ZXV5 915 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 NBPF11Q86T75 865 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 GAS2L3Q86XJ1 694 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 DIS3L2Q8IYB7 885 aaKnown RBP7.84□□□□□ -1.15
MSH2-204ENST00000461394 FSIP1Q8NA03 581 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 RGS22Q8NE09 1264 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 KCNG4Q8TDN1 519 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 C7orf43Q8WVR3 580 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 ZDHHC15Q96MV8 337 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.84□□□□□ -1.15
MSH2-204ENST00000461394 MTFR1LQ9H019 292 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 TNMDQ9H2S6 317 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 DDX4Q9NQI0 724 aaKnown RBP7.84□□□□□ -1.15
MSH2-204ENST00000461394 TCP11L1Q9NUJ3 509 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 DDX19AQ9NUU7 478 aaKnown RBP7.84□□□□□ -1.15
MSH2-204ENST00000461394 RTEL1Q9NZ71 1219 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 VPS54Q9P1Q0 977 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 SWAP70Q9UH65 585 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 CLIC4Q9Y696 253 aa7.84□□□□□ -1.15
MSH2-204ENST00000461394 V9GY48 417 aaPredicted RBP7.84□□□□□ -1.15
MSH2-204ENST00000461394 MYO3BQ8WXR4 1341 aa7.83□□□□□ -1.16
MSH2-204ENST00000461394 CNTNAP5Q8WYK1 1306 aa7.83□□□□□ -1.16
MSH2-204ENST00000461394 EP400Q96L91 3159 aa7.83□□□□□ -1.16
MSH2-204ENST00000461394 UBE2Q2LH0YL09 131 aa7.83□□□□□ -1.16
MSH2-204ENST00000461394 SPTLC2O15270 562 aa7.83□□□□□ -1.16
MSH2-204ENST00000461394 KINO60870 393 aaKnown RBP7.83□□□□□ -1.16
MSH2-204ENST00000461394 WDHD1O75717 1129 aaPredicted RBP7.83□□□□□ -1.16
MSH2-204ENST00000461394 YEATS4O95619 227 aa7.83□□□□□ -1.16
MSH2-204ENST00000461394 PARP1P09874 1014 aaKnown RBP7.83□□□□□ -1.16
MSH2-204ENST00000461394 TOP1P11387 765 aaKnown RBP7.83□□□□□ -1.16
MSH2-204ENST00000461394 XRCC6P12956 609 aaKnown RBP eCLIP7.83□□□□□ -1.16
MSH2-204ENST00000461394 LIG1P18858 919 aa7.83□□□□□ -1.16
MSH2-204ENST00000461394 EIF6P56537 245 aaKnown RBP7.83□□□□□ -1.16
MSH2-204ENST00000461394 NLRP5P59047 1200 aa7.83□□□□□ -1.16
MSH2-204ENST00000461394 TGFB2P61812 414 aa7.83□□□□□ -1.16
MSH2-204ENST00000461394 HDLBPQ00341 1268 aaKnown RBP7.83□□□□□ -1.16
MSH2-204ENST00000461394 TROAPQ12815 778 aa7.83□□□□□ -1.16
MSH2-204ENST00000461394 GRM4Q14833 912 aa7.83□□□□□ -1.16
MSH2-204ENST00000461394 CAMK4Q16566 473 aa7.83□□□□□ -1.16
MSH2-204ENST00000461394 MAP3K11Q16584 847 aa7.83□□□□□ -1.16
MSH2-204ENST00000461394 ILDR1Q86SU0 546 aaPredicted RBP7.83□□□□□ -1.16
MSH2-204ENST00000461394 OGFOD1Q8N543 542 aa7.83□□□□□ -1.16
MSH2-204ENST00000461394 JMYQ8N9B5 988 aa7.83□□□□□ -1.16
MSH2-204ENST00000461394 NEDD1Q8NHV4 660 aa7.83□□□□□ -1.16
MSH2-204ENST00000461394 PSMD1Q99460 953 aa7.83□□□□□ -1.16
MSH2-204ENST00000461394 TMEM47Q9BQJ4 181 aa7.83□□□□□ -1.16
MSH2-204ENST00000461394 FAM117AQ9C073 453 aa7.83□□□□□ -1.16
MSH2-204ENST00000461394 TDRD3Q9H7E2 651 aaKnown RBP7.83□□□□□ -1.16
MSH2-204ENST00000461394 IL17RBQ9NRM6 502 aa7.83□□□□□ -1.16
MSH2-204ENST00000461394 DACT1Q9NYF0 836 aa7.83□□□□□ -1.16
MSH2-204ENST00000461394 SERPINB13Q9UIV8 391 aa7.83□□□□□ -1.16
MSH2-204ENST00000461394 SERPINA10Q9UK55 444 aa7.83□□□□□ -1.16
MSH2-204ENST00000461394 RCOR1Q9UKL0 485 aa7.83□□□□□ -1.16
MSH2-204ENST00000461394 NOL7Q9UMY1 257 aaKnown RBP7.83□□□□□ -1.16
MSH2-204ENST00000461394 SNED1Q8TER0 1413 aa7.83□□□□□ -1.16
MSH2-204ENST00000461394 PSDA5PKW4 1024 aaPredicted RBP7.82□□□□□ -1.16
MSH2-204ENST00000461394 YDJCA8MPS7 323 aa7.82□□□□□ -1.16
MSH2-204ENST00000461394 BTBD18B2RXH4 712 aa7.82□□□□□ -1.16
MSH2-204ENST00000461394 PSMD14O00487 310 aa7.82□□□□□ -1.16
MSH2-204ENST00000461394 GOLGA8HP0CJ92 632 aa7.82□□□□□ -1.16
MSH2-204ENST00000461394 SCG2P13521 617 aa7.82□□□□□ -1.16
MSH2-204ENST00000461394 AKR1B1P15121 316 aa7.82□□□□□ -1.16
MSH2-204ENST00000461394 DLGAP5Q15398 846 aa7.82□□□□□ -1.16
MSH2-204ENST00000461394 ZRSR1Q15695 479 aaKnown RBP7.82□□□□□ -1.16
MSH2-204ENST00000461394 CCDC96Q2M329 555 aa7.82□□□□□ -1.16
MSH2-204ENST00000461394 PPP4R3BQ5MIZ7 849 aa7.82□□□□□ -1.16
MSH2-204ENST00000461394 RCSD1Q6JBY9 416 aa7.82□□□□□ -1.16
MSH2-204ENST00000461394 APOBEC3HQ6NTF7 200 aaKnown RBP7.82□□□□□ -1.16
MSH2-204ENST00000461394 RSBN1LQ6PCB5 846 aaPredicted RBP7.82□□□□□ -1.16
MSH2-204ENST00000461394 SASS6Q6UVJ0 657 aa7.82□□□□□ -1.16
MSH2-204ENST00000461394 NOSTRINQ8IVI9 506 aa7.82□□□□□ -1.16
MSH2-204ENST00000461394 LRRC47Q8N1G4 583 aaKnown RBP7.82□□□□□ -1.16
MSH2-204ENST00000461394 SRBD1Q8N5C6 995 aaKnown RBP7.82□□□□□ -1.16
MSH2-204ENST00000461394 RNF214Q8ND24 703 aa7.82□□□□□ -1.16
MSH2-204ENST00000461394 JDP2Q8WYK2 163 aa7.82□□□□□ -1.16
MSH2-204ENST00000461394 MRPS27Q92552 414 aaKnown RBP7.82□□□□□ -1.16
MSH2-204ENST00000461394 CEP95Q96GE4 821 aa7.82□□□□□ -1.16
MSH2-204ENST00000461394 PGBD1Q96JS3 809 aa7.82□□□□□ -1.16
MSH2-204ENST00000461394 LZTS2Q9BRK4 669 aa7.82□□□□□ -1.16
MSH2-204ENST00000461394 MRIQ9BWK5 157 aa7.82□□□□□ -1.16
MSH2-204ENST00000461394 TAOK3Q9H2K8 898 aa7.82□□□□□ -1.16
MSH2-204ENST00000461394 DHX36Q9H2U1 1008 aaKnown RBP7.82□□□□□ -1.16
MSH2-204ENST00000461394 FOXP1Q9H334 677 aaPredicted RBP7.82□□□□□ -1.16
MSH2-204ENST00000461394 VEZTQ9HBM0 779 aa7.82□□□□□ -1.16
MSH2-204ENST00000461394 POLR3EQ9NVU0 708 aa7.82□□□□□ -1.16
MSH2-204ENST00000461394 SEC63Q9UGP8 760 aaKnown RBP7.82□□□□□ -1.16
MSH2-204ENST00000461394 CEP131Q9UPN4 1083 aa7.82□□□□□ -1.16
MSH2-204ENST00000461394 BCS1LQ9Y276 419 aa7.82□□□□□ -1.16
MSH2-204ENST00000461394 PCDHAC2Q9Y5I4 1007 aa7.82□□□□□ -1.16
MSH2-204ENST00000461394 FRMPD2Q68DX3 1309 aaPredicted RBP7.81□□□□□ -1.16
MSH2-204ENST00000461394 BRCA1P38398 1863 aaKnown RBP7.81□□□□□ -1.16
MSH2-204ENST00000461394 TCP10L2B9ZVM9 353 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms