RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 IGKV6D-41A0A0C4DH26 115 aa19.2■□□□□ 0.66
SHANK1-205ENST00000461154 A0A1W2PRG0 241 aa19.2■□□□□ 0.66
SHANK1-205ENST00000461154 GNRH1P01148 92 aa19.2■□□□□ 0.66
SHANK1-205ENST00000461154 BCRP11274 1271 aa19.2■□□□□ 0.66
SHANK1-205ENST00000461154 HOXA7P31268 230 aaPredicted RBP19.2■□□□□ 0.66
SHANK1-205ENST00000461154 LPAR1Q92633 364 aa19.2■□□□□ 0.66
SHANK1-205ENST00000461154 ESR2Q92731 530 aa19.2■□□□□ 0.66
SHANK1-205ENST00000461154 GOPCQ9HD26 462 aa19.2■□□□□ 0.66
SHANK1-205ENST00000461154 INCENPQ9NQS7 918 aa19.2■□□□□ 0.66
SHANK1-205ENST00000461154 TMX2Q9Y320 296 aa19.2■□□□□ 0.66
SHANK1-205ENST00000461154 RBM8AQ9Y5S9 174 aaKnown RBP19.2■□□□□ 0.66
SHANK1-205ENST00000461154 CCDC85CA6NKD9 419 aa19.19■□□□□ 0.66
SHANK1-205ENST00000461154 TTLL1O95922 423 aa19.19■□□□□ 0.66
SHANK1-205ENST00000461154 GCLCP48506 637 aaPredicted RBP19.19■□□□□ 0.66
SHANK1-205ENST00000461154 IRX3P78415 501 aaPredicted RBP19.19■□□□□ 0.66
SHANK1-205ENST00000461154 SIAH1Q8IUQ4 282 aa19.19■□□□□ 0.66
SHANK1-205ENST00000461154 CEP95Q96GE4 821 aa19.19■□□□□ 0.66
SHANK1-205ENST00000461154 KRT23Q9C075 422 aa19.19■□□□□ 0.66
SHANK1-205ENST00000461154 ASCC2Q9H1I8 757 aaPredicted RBP19.19■□□□□ 0.66
SHANK1-205ENST00000461154 MTMR4Q9NYA4 1195 aa19.19■□□□□ 0.66
SHANK1-205ENST00000461154 SYNPO2Q9UMS6 1093 aa19.19■□□□□ 0.66
SHANK1-205ENST00000461154 HPS5Q9UPZ3 1129 aa19.19■□□□□ 0.66
SHANK1-205ENST00000461154 PTPN22Q9Y2R2 807 aa19.19■□□□□ 0.66
SHANK1-205ENST00000461154 TACC3Q9Y6A5 838 aa19.19■□□□□ 0.66
SHANK1-205ENST00000461154 NEDD4P46934 1319 aa19.19■□□□□ 0.66
SHANK1-205ENST00000461154 CYP21A2P08686 494 aa19.18■□□□□ 0.66
SHANK1-205ENST00000461154 TRDNQ13061 729 aa19.18■□□□□ 0.66
SHANK1-205ENST00000461154 VCPKMTQ9H867 229 aa19.18■□□□□ 0.66
SHANK1-205ENST00000461154 MYH4Q9Y623 1939 aa19.17■□□□□ 0.66
SHANK1-205ENST00000461154 USP17L15C9J2P7 530 aa19.17■□□□□ 0.66
SHANK1-205ENST00000461154 USP17L13C9JLJ4 530 aa19.17■□□□□ 0.66
SHANK1-205ENST00000461154 USP17L11C9JVI0 530 aa19.17■□□□□ 0.66
SHANK1-205ENST00000461154 USP17L18D6R9N7 530 aa19.17■□□□□ 0.66
SHANK1-205ENST00000461154 USP17L22D6RA61 530 aa19.17■□□□□ 0.66
SHANK1-205ENST00000461154 USP17L17D6RBQ6 530 aa19.17■□□□□ 0.66
SHANK1-205ENST00000461154 USP17L19D6RCP7 530 aa19.17■□□□□ 0.66
SHANK1-205ENST00000461154 USP17L20D6RJB6 530 aa19.17■□□□□ 0.66
SHANK1-205ENST00000461154 REC8O95072 547 aa19.17■□□□□ 0.66
SHANK1-205ENST00000461154 VCAM1P19320 739 aa19.17■□□□□ 0.66
SHANK1-205ENST00000461154 HOXD10P28358 340 aa19.17■□□□□ 0.66
SHANK1-205ENST00000461154 PSMC4P43686 418 aa19.17■□□□□ 0.66
SHANK1-205ENST00000461154 PRMT2P55345 433 aa19.17■□□□□ 0.66
SHANK1-205ENST00000461154 CAP1Q01518 475 aa19.17■□□□□ 0.66
SHANK1-205ENST00000461154 USP17L24Q0WX57 530 aa19.17■□□□□ 0.66
SHANK1-205ENST00000461154 TCP11L1Q9NUJ3 509 aa19.17■□□□□ 0.66
SHANK1-205ENST00000461154 CLIP2Q9UDT6 1046 aa19.17■□□□□ 0.66
SHANK1-205ENST00000461154 FMNL1O95466 1100 aaPredicted RBP19.16■□□□□ 0.66
SHANK1-205ENST00000461154 FAM110CQ1W6H9 321 aa19.16■□□□□ 0.66
SHANK1-205ENST00000461154 CCDC178Q5BJE1 867 aa19.16■□□□□ 0.66
SHANK1-205ENST00000461154 RNF20Q5VTR2 975 aa19.16■□□□□ 0.66
SHANK1-205ENST00000461154 IQCA1Q86XH1 822 aa19.16■□□□□ 0.66
SHANK1-205ENST00000461154 ANKRD13CQ8N6S4 541 aa19.16■□□□□ 0.66
SHANK1-205ENST00000461154 GTF3C2Q8WUA4 911 aaPredicted RBP19.16■□□□□ 0.66
SHANK1-205ENST00000461154 MKL1Q969V6 931 aa19.16■□□□□ 0.66
SHANK1-205ENST00000461154 ARHGAP39Q9C0H5 1083 aa19.16■□□□□ 0.66
SHANK1-205ENST00000461154 STX8Q9UNK0 236 aa19.16■□□□□ 0.66
SHANK1-205ENST00000461154 B4E1Z4 1266 aa19.15■□□□□ 0.66
SHANK1-205ENST00000461154 WDR46O15213 610 aaKnown RBP19.15■□□□□ 0.66
SHANK1-205ENST00000461154 FCGRTP55899 365 aa19.15■□□□□ 0.66
SHANK1-205ENST00000461154 RALYLQ86SE5 291 aaKnown RBP19.15■□□□□ 0.66
SHANK1-205ENST00000461154 P2RX7Q99572 595 aaKnown RBP19.15■□□□□ 0.66
SHANK1-205ENST00000461154 RPAP3Q9H6T3 665 aaPredicted RBP19.15■□□□□ 0.66
SHANK1-205ENST00000461154 IL17RBQ9NRM6 502 aa19.15■□□□□ 0.66
SHANK1-205ENST00000461154 RAD21O60216 631 aa19.14■□□□□ 0.65
SHANK1-205ENST00000461154 NMT2O60551 498 aa19.14■□□□□ 0.65
SHANK1-205ENST00000461154 KDM4AO75164 1064 aa19.14■□□□□ 0.65
SHANK1-205ENST00000461154 NECTIN1Q15223 517 aa19.14■□□□□ 0.65
SHANK1-205ENST00000461154 NCOA7Q8NI08 942 aa19.14■□□□□ 0.65
SHANK1-205ENST00000461154 TRIM47Q96LD4 638 aa19.14■□□□□ 0.65
SHANK1-205ENST00000461154 TTC14Q96N46 770 aa19.14■□□□□ 0.65
SHANK1-205ENST00000461154 E7EWF7 191 aa19.13■□□□□ 0.65
SHANK1-205ENST00000461154 F5H6K3 240 aa19.13■□□□□ 0.65
SHANK1-205ENST00000461154 SLC27A2O14975 620 aa19.13■□□□□ 0.65
SHANK1-205ENST00000461154 EIF5BO60841 1220 aaKnown RBP19.13■□□□□ 0.65
SHANK1-205ENST00000461154 ECM2O94769 699 aaPredicted RBP19.13■□□□□ 0.65
SHANK1-205ENST00000461154 HERVK_113P62684 666 aa19.13■□□□□ 0.65
SHANK1-205ENST00000461154 KLRC3Q07444 240 aa19.13■□□□□ 0.65
SHANK1-205ENST00000461154 CREB3L3Q68CJ9 461 aa19.13■□□□□ 0.65
SHANK1-205ENST00000461154 CATSPERGQ6ZRH7 1159 aa19.13■□□□□ 0.65
SHANK1-205ENST00000461154 SPICE1Q8N0Z3 855 aa19.13■□□□□ 0.65
SHANK1-205ENST00000461154 GMCL1P1Q8NEA9 526 aa19.13■□□□□ 0.65
SHANK1-205ENST00000461154 TANGO6Q9C0B7 1094 aa19.13■□□□□ 0.65
SHANK1-205ENST00000461154 SRRDQ9UH36 339 aa19.13■□□□□ 0.65
SHANK1-205ENST00000461154 EPB41L2O43491 1005 aaKnown RBP19.12■□□□□ 0.65
SHANK1-205ENST00000461154 CTGFP29279 349 aa19.12■□□□□ 0.65
SHANK1-205ENST00000461154 NOVP48745 357 aa19.12■□□□□ 0.65
SHANK1-205ENST00000461154 LRRC47Q8N1G4 583 aaKnown RBP19.12■□□□□ 0.65
SHANK1-205ENST00000461154 UBAC1Q9BSL1 405 aa19.12■□□□□ 0.65
SHANK1-205ENST00000461154 ZSWIM5Q9P217 1185 aa19.12■□□□□ 0.65
SHANK1-205ENST00000461154 MORF4L1Q9UBU8 362 aa19.12■□□□□ 0.65
SHANK1-205ENST00000461154 GTF3C3Q9Y5Q9 886 aa19.12■□□□□ 0.65
SHANK1-205ENST00000461154 TNPO2O14787 897 aaKnown RBP19.11■□□□□ 0.65
SHANK1-205ENST00000461154 NDUFB10O96000 172 aa19.11■□□□□ 0.65
SHANK1-205ENST00000461154 TOP1P11387 765 aaKnown RBP19.11■□□□□ 0.65
SHANK1-205ENST00000461154 KIAA1755Q5JYT7 1200 aa19.11■□□□□ 0.65
SHANK1-205ENST00000461154 DGKHQ86XP1 1220 aa19.11■□□□□ 0.65
SHANK1-205ENST00000461154 GPRC5AQ8NFJ5 357 aa19.11■□□□□ 0.65
SHANK1-205ENST00000461154 ZSCAN10Q96SZ4 725 aaPredicted RBP19.11■□□□□ 0.65
SHANK1-205ENST00000461154 PTCH2Q9Y6C5 1203 aa19.11■□□□□ 0.65
SHANK1-205ENST00000461154 MYPNQ86TC9 1320 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms