RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 FANCD2OSQ96PS1 177 aa6.67□□□□□ -1.34
ATPAF1-203ENST00000460928 STK26Q9P289 416 aa6.67□□□□□ -1.34
ATPAF1-203ENST00000460928 SLC5A6Q9Y289 635 aa6.67□□□□□ -1.34
ATPAF1-203ENST00000460928 KDM5AP29375 1690 aaKnown RBP6.67□□□□□ -1.34
ATPAF1-203ENST00000460928 METP08581 1390 aa6.67□□□□□ -1.34
ATPAF1-203ENST00000460928 PTPRUQ92729 1446 aa6.67□□□□□ -1.34
ATPAF1-203ENST00000460928 DSC3Q14574 896 aa6.66□□□□□ -1.34
ATPAF1-203ENST00000460928 EPS8L3Q8TE67 593 aaKnown RBP6.66□□□□□ -1.34
ATPAF1-203ENST00000460928 PIDD1Q9HB75 910 aa6.66□□□□□ -1.34
ATPAF1-203ENST00000460928 DISC1Q9NRI5 854 aa6.66□□□□□ -1.34
ATPAF1-203ENST00000460928 PLEKHG1Q9ULL1 1385 aa6.66□□□□□ -1.34
ATPAF1-203ENST00000460928 MED14O60244 1454 aa6.66□□□□□ -1.34
ATPAF1-203ENST00000460928 ASXL1Q8IXJ9 1541 aa6.66□□□□□ -1.34
ATPAF1-203ENST00000460928 LRP5O75197 1615 aa6.65□□□□□ -1.34
ATPAF1-203ENST00000460928 RECKO95980 971 aa6.65□□□□□ -1.34
ATPAF1-203ENST00000460928 PPP2R3AQ06190 1150 aa6.65□□□□□ -1.34
ATPAF1-203ENST00000460928 FMR1Q06787 632 aaKnown RBP eCLIP6.65□□□□□ -1.34
ATPAF1-203ENST00000460928 TSNAXIP1Q2TAA8 658 aa6.65□□□□□ -1.34
ATPAF1-203ENST00000460928 DTHD1Q6ZMT9 781 aa6.65□□□□□ -1.34
ATPAF1-203ENST00000460928 PDZD3Q86UT5 571 aa6.65□□□□□ -1.34
ATPAF1-203ENST00000460928 SMYD4Q8IYR2 804 aaPredicted RBP6.65□□□□□ -1.34
ATPAF1-203ENST00000460928 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.65□□□□□ -1.34
ATPAF1-203ENST00000460928 TMEM39AQ9NV64 488 aa6.65□□□□□ -1.34
ATPAF1-203ENST00000460928 KCNA6P17658 529 aa6.64□□□□□ -1.35
ATPAF1-203ENST00000460928 MAPK8P45983 427 aa6.64□□□□□ -1.35
ATPAF1-203ENST00000460928 ZNF157P51786 506 aaPredicted RBP6.64□□□□□ -1.35
ATPAF1-203ENST00000460928 SAFB2Q14151 953 aaKnown RBP eCLIP6.64□□□□□ -1.35
ATPAF1-203ENST00000460928 LCE1DQ5T752 114 aa6.64□□□□□ -1.35
ATPAF1-203ENST00000460928 ZNF772Q68DY9 489 aaPredicted RBP6.64□□□□□ -1.35
ATPAF1-203ENST00000460928 OGFOD2Q6N063 350 aa6.64□□□□□ -1.35
ATPAF1-203ENST00000460928 POU5F2Q8N7G0 328 aa6.64□□□□□ -1.35
ATPAF1-203ENST00000460928 MKNK2Q9HBH9 465 aa6.64□□□□□ -1.35
ATPAF1-203ENST00000460928 PPP4R2Q9NY27 417 aa6.64□□□□□ -1.35
ATPAF1-203ENST00000460928 RPGRIP1LQ68CZ1 1315 aa6.64□□□□□ -1.35
ATPAF1-203ENST00000460928 CDK12Q9NYV4 1490 aaPredicted RBP6.64□□□□□ -1.35
ATPAF1-203ENST00000460928 PIK3C2GO75747 1445 aa6.63□□□□□ -1.35
ATPAF1-203ENST00000460928 LDHBP07195 334 aaKnown RBP6.63□□□□□ -1.35
ATPAF1-203ENST00000460928 FAM87AP0C7U9 286 aa6.63□□□□□ -1.35
ATPAF1-203ENST00000460928 FCGRTP55899 365 aa6.63□□□□□ -1.35
ATPAF1-203ENST00000460928 FGD1P98174 961 aa6.63□□□□□ -1.35
ATPAF1-203ENST00000460928 XPCQ01831 940 aaPredicted RBP6.63□□□□□ -1.35
ATPAF1-203ENST00000460928 CDK5R2Q13319 367 aa6.63□□□□□ -1.35
ATPAF1-203ENST00000460928 MRPL58Q14197 206 aaKnown RBP6.63□□□□□ -1.35
ATPAF1-203ENST00000460928 WAPLQ7Z5K2 1190 aa6.63□□□□□ -1.35
ATPAF1-203ENST00000460928 NETO1Q8TDF5 533 aa6.63□□□□□ -1.35
ATPAF1-203ENST00000460928 BACH2Q9BYV9 841 aa6.63□□□□□ -1.35
ATPAF1-203ENST00000460928 ZC3H12CQ9C0D7 883 aaKnown RBP6.63□□□□□ -1.35
ATPAF1-203ENST00000460928 LGR6Q9HBX8 967 aa6.63□□□□□ -1.35
ATPAF1-203ENST00000460928 NLRP2Q9NX02 1062 aa6.63□□□□□ -1.35
ATPAF1-203ENST00000460928 GPN3Q9UHW5 284 aaPredicted RBP6.63□□□□□ -1.35
ATPAF1-203ENST00000460928 PLEKHH1Q9ULM0 1364 aa6.63□□□□□ -1.35
ATPAF1-203ENST00000460928 CHD2O14647 1828 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-203ENST00000460928 XIRP1Q702N8 1843 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-203ENST00000460928 NRXN1Q9ULB1 1477 aa6.62□□□□□ -1.35
ATPAF1-203ENST00000460928 PRAG1Q86YV5 1406 aa6.62□□□□□ -1.35
ATPAF1-203ENST00000460928 TONSLQ96HA7 1378 aa6.62□□□□□ -1.35
ATPAF1-203ENST00000460928 ROBO2Q9HCK4 1378 aa6.62□□□□□ -1.35
ATPAF1-203ENST00000460928 YY1P25490 414 aa6.62□□□□□ -1.35
ATPAF1-203ENST00000460928 TTLL4Q14679 1199 aa6.62□□□□□ -1.35
ATPAF1-203ENST00000460928 SPRED2Q7Z698 418 aa6.62□□□□□ -1.35
ATPAF1-203ENST00000460928 UBE2Q2Q8WVN8 375 aa6.62□□□□□ -1.35
ATPAF1-203ENST00000460928 BCO2Q9BYV7 579 aa6.62□□□□□ -1.35
ATPAF1-203ENST00000460928 C14orf93Q9H972 538 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-203ENST00000460928 PCOLCE2Q9UKZ9 415 aa6.62□□□□□ -1.35
ATPAF1-203ENST00000460928 TBX22Q9Y458 520 aa6.62□□□□□ -1.35
ATPAF1-203ENST00000460928 ROBO1Q9Y6N7 1651 aa6.61□□□□□ -1.35
ATPAF1-203ENST00000460928 MYOM2P54296 1465 aa6.61□□□□□ -1.35
ATPAF1-203ENST00000460928 TMEM94Q12767 1356 aa6.61□□□□□ -1.35
ATPAF1-203ENST00000460928 CLSPNQ9HAW4 1339 aa6.61□□□□□ -1.35
ATPAF1-203ENST00000460928 PRPF40AO75400 957 aaKnown RBP6.61□□□□□ -1.35
ATPAF1-203ENST00000460928 PAPLNO95428 1278 aa6.61□□□□□ -1.35
ATPAF1-203ENST00000460928 ERVK-24P63145 666 aa6.61□□□□□ -1.35
ATPAF1-203ENST00000460928 PLCL1Q15111 1095 aa6.61□□□□□ -1.35
ATPAF1-203ENST00000460928 MEX3CQ5U5Q3 659 aaKnown RBP6.61□□□□□ -1.35
ATPAF1-203ENST00000460928 PI16Q6UXB8 463 aa6.61□□□□□ -1.35
ATPAF1-203ENST00000460928 ZNF574Q6ZN55 896 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-203ENST00000460928 SULF2Q8IWU5 870 aa6.61□□□□□ -1.35
ATPAF1-203ENST00000460928 PLD6Q8N2A8 252 aaKnown RBP6.61□□□□□ -1.35
ATPAF1-203ENST00000460928 DUSP9Q99956 384 aaKnown RBP6.61□□□□□ -1.35
ATPAF1-203ENST00000460928 CACNA2D2Q9NY47 1150 aa6.61□□□□□ -1.35
ATPAF1-203ENST00000460928 PARP2Q9UGN5 583 aa6.61□□□□□ -1.35
ATPAF1-203ENST00000460928 VAV3Q9UKW4 847 aa6.61□□□□□ -1.35
ATPAF1-203ENST00000460928 EP400Q96L91 3159 aa6.61□□□□□ -1.35
ATPAF1-203ENST00000460928 PHLPP1O60346 1717 aa6.6□□□□□ -1.35
ATPAF1-203ENST00000460928 BIN1O00499 593 aa6.6□□□□□ -1.35
ATPAF1-203ENST00000460928 NEFMP07197 916 aa6.6□□□□□ -1.35
ATPAF1-203ENST00000460928 HCLS1P14317 486 aaPredicted RBP6.6□□□□□ -1.35
ATPAF1-203ENST00000460928 FUT4P22083 530 aa6.6□□□□□ -1.35
ATPAF1-203ENST00000460928 NME2P22392 152 aa6.6□□□□□ -1.35
ATPAF1-203ENST00000460928 ARNTP27540 789 aa6.6□□□□□ -1.35
ATPAF1-203ENST00000460928 ATP2B2Q01814 1243 aa6.6□□□□□ -1.35
ATPAF1-203ENST00000460928 PRKCQQ04759 706 aa6.6□□□□□ -1.35
ATPAF1-203ENST00000460928 ZNF252P-AS1Q0IIN9 211 aa6.6□□□□□ -1.35
ATPAF1-203ENST00000460928 ZNF792Q3KQV3 632 aa6.6□□□□□ -1.35
ATPAF1-203ENST00000460928 ZC3H12AQ5D1E8 599 aaKnown RBP6.6□□□□□ -1.35
ATPAF1-203ENST00000460928 KCNB2Q92953 911 aa6.6□□□□□ -1.35
ATPAF1-203ENST00000460928 DUSP23Q9BVJ7 150 aa6.6□□□□□ -1.35
ATPAF1-203ENST00000460928 EMILIN2Q9BXX0 1053 aa6.6□□□□□ -1.35
ATPAF1-203ENST00000460928 KRTAP4-7Q9BYR0 210 aa6.6□□□□□ -1.35
ATPAF1-203ENST00000460928 WWC3Q9ULE0 1092 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms