RNA–Protein interactions for RNA: ENST00000459979.2

HOXD3-204, Transcript of homeobox D3, humanhuman

TSL 1 (best)

Gene HOXD3, Length 1,055 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-204ENST00000459979 HELLSQ9NRZ9 838 aa22.12■■□□□ 1.13
HOXD3-204ENST00000459979 CYP2B6P20813 491 aa22.11■■□□□ 1.13
HOXD3-204ENST00000459979 ACER1Q8TDN7 264 aa22.11■■□□□ 1.13
HOXD3-204ENST00000459979 TRIB2Q92519 343 aa22.11■■□□□ 1.13
HOXD3-204ENST00000459979 MORF4L1Q9UBU8 362 aa22.11■■□□□ 1.13
HOXD3-204ENST00000459979 SZT2Q5T011 3432 aa22.11■■□□□ 1.13
HOXD3-204ENST00000459979 MPHOSPH10O00566 681 aaKnown RBP22.1■■□□□ 1.13
HOXD3-204ENST00000459979 APPP05067 770 aa22.1■■□□□ 1.13
HOXD3-204ENST00000459979 AKR1B1P15121 316 aa22.1■■□□□ 1.13
HOXD3-204ENST00000459979 TDO2P48775 406 aa22.1■■□□□ 1.13
HOXD3-204ENST00000459979 FEZ1Q99689 392 aa22.1■■□□□ 1.13
HOXD3-204ENST00000459979 TRIM6-TRIM34B2RNG4 842 aa22.09■■□□□ 1.13
HOXD3-204ENST00000459979 HERVK_113P62684 666 aa22.09■■□□□ 1.13
HOXD3-204ENST00000459979 NECAB2Q7Z6G3 386 aa22.09■■□□□ 1.13
HOXD3-204ENST00000459979 SIAH1Q8IUQ4 282 aa22.09■■□□□ 1.13
HOXD3-204ENST00000459979 HMX1Q9NP08 348 aaPredicted RBP22.09■■□□□ 1.13
HOXD3-204ENST00000459979 RANBP2P49792 3224 aaKnown RBP22.08■■□□□ 1.13
HOXD3-204ENST00000459979 RPTORQ8N122 1335 aa22.08■■□□□ 1.13
HOXD3-204ENST00000459979 A0A1W2PRG0 241 aa22.08■■□□□ 1.13
HOXD3-204ENST00000459979 MINDY4BA8MYZ0 360 aa22.08■■□□□ 1.13
HOXD3-204ENST00000459979 FOXP2O15409 715 aa22.08■■□□□ 1.13
HOXD3-204ENST00000459979 MCMDC2Q4G0Z9 681 aa22.08■■□□□ 1.13
HOXD3-204ENST00000459979 C7orf61Q8IZ16 206 aa22.08■■□□□ 1.13
HOXD3-204ENST00000459979 GREB1LQ9C091 1923 aaPredicted RBP22.08■■□□□ 1.12
HOXD3-204ENST00000459979 USP17L15C9J2P7 530 aa22.07■■□□□ 1.12
HOXD3-204ENST00000459979 USP17L13C9JLJ4 530 aa22.07■■□□□ 1.12
HOXD3-204ENST00000459979 USP17L11C9JVI0 530 aa22.07■■□□□ 1.12
HOXD3-204ENST00000459979 USP17L18D6R9N7 530 aa22.07■■□□□ 1.12
HOXD3-204ENST00000459979 USP17L22D6RA61 530 aa22.07■■□□□ 1.12
HOXD3-204ENST00000459979 USP17L17D6RBQ6 530 aa22.07■■□□□ 1.12
HOXD3-204ENST00000459979 USP17L19D6RCP7 530 aa22.07■■□□□ 1.12
HOXD3-204ENST00000459979 USP17L20D6RJB6 530 aa22.07■■□□□ 1.12
HOXD3-204ENST00000459979 RASA1P20936 1047 aa22.07■■□□□ 1.12
HOXD3-204ENST00000459979 PDE4AP27815 886 aa22.07■■□□□ 1.12
HOXD3-204ENST00000459979 USP17L24Q0WX57 530 aa22.07■■□□□ 1.12
HOXD3-204ENST00000459979 Q3C1V9 767 aa22.07■■□□□ 1.12
HOXD3-204ENST00000459979 GTF3C2Q8WUA4 911 aaPredicted RBP22.07■■□□□ 1.12
HOXD3-204ENST00000459979 FAM227BQ96M60 508 aa22.07■■□□□ 1.12
HOXD3-204ENST00000459979 PAGR1Q9BTK6 254 aa22.07■■□□□ 1.12
HOXD3-204ENST00000459979 NAPBQ9H115 298 aa22.07■■□□□ 1.12
HOXD3-204ENST00000459979 KANSL2Q9H9L4 492 aa22.07■■□□□ 1.12
HOXD3-204ENST00000459979 ZNF287Q9HBT7 754 aa22.07■■□□□ 1.12
HOXD3-204ENST00000459979 RBPJLQ9UBG7 517 aa22.07■■□□□ 1.12
HOXD3-204ENST00000459979 TMX2Q9Y320 296 aa22.07■■□□□ 1.12
HOXD3-204ENST00000459979 SOX1O00570 391 aaPredicted RBP22.06■■□□□ 1.12
HOXD3-204ENST00000459979 VCAM1P19320 739 aa22.06■■□□□ 1.12
HOXD3-204ENST00000459979 MNX1P50219 401 aaPredicted RBP22.06■■□□□ 1.12
HOXD3-204ENST00000459979 ICA1Q05084 483 aa22.06■■□□□ 1.12
HOXD3-204ENST00000459979 ALX1Q15699 326 aa22.06■■□□□ 1.12
HOXD3-204ENST00000459979 ZYXQ15942 572 aaKnown RBP22.06■■□□□ 1.12
HOXD3-204ENST00000459979 POTEEQ6S8J3 1075 aa22.06■■□□□ 1.12
HOXD3-204ENST00000459979 CATSPERGQ6ZRH7 1159 aa22.06■■□□□ 1.12
HOXD3-204ENST00000459979 CCDC129Q6ZRS4 1044 aa22.06■■□□□ 1.12
HOXD3-204ENST00000459979 GPRC5AQ8NFJ5 357 aa22.06■■□□□ 1.12
HOXD3-204ENST00000459979 RILPL2Q969X0 211 aa22.06■■□□□ 1.12
HOXD3-204ENST00000459979 NUDT12Q9BQG2 462 aa22.06■■□□□ 1.12
HOXD3-204ENST00000459979 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.06■■□□□ 1.12
HOXD3-204ENST00000459979 PORCNQ9H237 461 aa22.06■■□□□ 1.12
HOXD3-204ENST00000459979 MKNK2Q9HBH9 465 aa22.06■■□□□ 1.12
HOXD3-204ENST00000459979 ARHGEF10LQ9HCE6 1279 aa22.06■■□□□ 1.12
HOXD3-204ENST00000459979 ZMYND8Q9ULU4 1186 aaPredicted RBP22.06■■□□□ 1.12
HOXD3-204ENST00000459979 A0A0D9SFI3 127 aa22.05■■□□□ 1.12
HOXD3-204ENST00000459979 PRKAR2AP13861 404 aaKnown RBP22.05■■□□□ 1.12
HOXD3-204ENST00000459979 CAPN2P17655 700 aa22.05■■□□□ 1.12
HOXD3-204ENST00000459979 SDSP20132 328 aa22.05■■□□□ 1.12
HOXD3-204ENST00000459979 SH2D4AQ9H788 454 aa22.05■■□□□ 1.12
HOXD3-204ENST00000459979 FRMPD3Q5JV73 1810 aa22.05■■□□□ 1.12
HOXD3-204ENST00000459979 ERVK-9P63128 1117 aa22.04■■□□□ 1.12
HOXD3-204ENST00000459979 ERVK-24P63145 666 aa22.04■■□□□ 1.12
HOXD3-204ENST00000459979 PPARAQ07869 468 aa22.04■■□□□ 1.12
HOXD3-204ENST00000459979 NMIQ13287 307 aaPredicted RBP22.04■■□□□ 1.12
HOXD3-204ENST00000459979 LBX2Q6XYB7 198 aa22.04■■□□□ 1.12
HOXD3-204ENST00000459979 ANKLE1Q8NAG6 615 aa22.04■■□□□ 1.12
HOXD3-204ENST00000459979 LPAR1Q92633 364 aa22.04■■□□□ 1.12
HOXD3-204ENST00000459979 LRCH3Q96II8 777 aa22.04■■□□□ 1.12
HOXD3-204ENST00000459979 SLC3A2P08195 630 aaKnown RBP22.03■■□□□ 1.12
HOXD3-204ENST00000459979 SYN1P17600 705 aa22.03■■□□□ 1.12
HOXD3-204ENST00000459979 CCL14Q16627 93 aa22.03■■□□□ 1.12
HOXD3-204ENST00000459979 MAP3K21Q5TCX8 1036 aa22.03■■□□□ 1.12
HOXD3-204ENST00000459979 VPS53Q5VIR6 699 aa22.03■■□□□ 1.12
HOXD3-204ENST00000459979 NBPF3Q9H094 633 aa22.03■■□□□ 1.12
HOXD3-204ENST00000459979 VCPKMTQ9H867 229 aa22.03■■□□□ 1.12
HOXD3-204ENST00000459979 ANAPC4Q9UJX5 808 aa22.03■■□□□ 1.12
HOXD3-204ENST00000459979 ZMYM6O95789 1325 aa22.03■■□□□ 1.12
HOXD3-204ENST00000459979 HIP1O00291 1037 aa22.02■■□□□ 1.12
HOXD3-204ENST00000459979 EEF2P13639 858 aaKnown RBP22.02■■□□□ 1.12
HOXD3-204ENST00000459979 PDE4BQ07343 736 aa22.02■■□□□ 1.12
HOXD3-204ENST00000459979 GPR142Q7Z601 462 aa22.02■■□□□ 1.12
HOXD3-204ENST00000459979 CLEC10AQ8IUN9 316 aa22.02■■□□□ 1.12
HOXD3-204ENST00000459979 CCAR1Q8IX12 1150 aaKnown RBP22.02■■□□□ 1.12
HOXD3-204ENST00000459979 ZNF444Q8N0Y2 327 aaPredicted RBP22.02■■□□□ 1.12
HOXD3-204ENST00000459979 SOCS4Q8WXH5 440 aa22.02■■□□□ 1.12
HOXD3-204ENST00000459979 C11orf49Q9H6J7 331 aa22.02■■□□□ 1.12
HOXD3-204ENST00000459979 RPAP3Q9H6T3 665 aaPredicted RBP22.02■■□□□ 1.12
HOXD3-204ENST00000459979 OGDHLQ9ULD0 1010 aa22.02■■□□□ 1.12
HOXD3-204ENST00000459979 IGKV6D-41A0A0C4DH26 115 aa22.01■■□□□ 1.11
HOXD3-204ENST00000459979 ZKSCAN1P17029 563 aaPredicted RBP22.01■■□□□ 1.11
HOXD3-204ENST00000459979 MAPK4P31152 587 aa22.01■■□□□ 1.11
HOXD3-204ENST00000459979 CACNB2Q08289 660 aaPredicted RBP22.01■■□□□ 1.11
HOXD3-204ENST00000459979 ZNF589Q86UQ0 364 aaPredicted RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms