RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 KAT14Q9H8E8 782 aa10.04□□□□□ -0.8
HDAC3-202ENST00000459727 TCP11L1Q9NUJ3 509 aa10.04□□□□□ -0.8
HDAC3-202ENST00000459727 VPS54Q9P1Q0 977 aa10.04□□□□□ -0.8
HDAC3-202ENST00000459727 NARFQ9UHQ1 456 aa10.04□□□□□ -0.8
HDAC3-202ENST00000459727 LEMD3Q9Y2U8 911 aa10.04□□□□□ -0.8
HDAC3-202ENST00000459727 COL1A1P02452 1464 aaPredicted RBP10.04□□□□□ -0.8
HDAC3-202ENST00000459727 A0A087WWV3 80 aa10.03□□□□□ -0.8
HDAC3-202ENST00000459727 A0A0G2JS52 829 aa10.03□□□□□ -0.8
HDAC3-202ENST00000459727 TSPY2A6NKD2 308 aa10.03□□□□□ -0.8
HDAC3-202ENST00000459727 hCG_1984214I3L0E3 225 aa10.03□□□□□ -0.8
HDAC3-202ENST00000459727 RPS6KA4O75676 772 aa10.03□□□□□ -0.8
HDAC3-202ENST00000459727 KIF20AO95235 890 aa10.03□□□□□ -0.8
HDAC3-202ENST00000459727 PLCG2P16885 1265 aa10.03□□□□□ -0.8
HDAC3-202ENST00000459727 CASQ1P31415 396 aa10.03□□□□□ -0.8
HDAC3-202ENST00000459727 GYG1P46976 350 aa10.03□□□□□ -0.8
HDAC3-202ENST00000459727 MECOMQ03112 1051 aa10.03□□□□□ -0.8
HDAC3-202ENST00000459727 DPYDQ12882 1025 aa10.03□□□□□ -0.8
HDAC3-202ENST00000459727 STIM1Q13586 685 aa10.03□□□□□ -0.8
HDAC3-202ENST00000459727 NR1I3Q14994 352 aa10.03□□□□□ -0.8
HDAC3-202ENST00000459727 CDKAL1Q5VV42 579 aa10.03□□□□□ -0.8
HDAC3-202ENST00000459727 C15orf52Q6ZUT6 534 aaKnown RBP10.03□□□□□ -0.8
HDAC3-202ENST00000459727 FOXP4Q8IVH2 680 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-202ENST00000459727 SLF2Q8IX21 1173 aa10.03□□□□□ -0.8
HDAC3-202ENST00000459727 ZNF713Q8N859 430 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-202ENST00000459727 SYMPKQ92797 1274 aaKnown RBP10.03□□□□□ -0.8
HDAC3-202ENST00000459727 TNFRSF25Q93038 417 aa10.03□□□□□ -0.8
HDAC3-202ENST00000459727 DHX58Q96C10 678 aa10.03□□□□□ -0.8
HDAC3-202ENST00000459727 PAGE5Q96GU1 130 aa10.03□□□□□ -0.8
HDAC3-202ENST00000459727 DCP1AQ9NPI6 582 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-202ENST00000459727 MYO1AQ9UBC5 1043 aa10.03□□□□□ -0.8
HDAC3-202ENST00000459727 RWDD2AQ9UIY3 292 aa10.03□□□□□ -0.8
HDAC3-202ENST00000459727 TTF2Q9UNY4 1162 aaKnown RBP10.03□□□□□ -0.8
HDAC3-202ENST00000459727 PPP2R2CQ9Y2T4 447 aa10.03□□□□□ -0.8
HDAC3-202ENST00000459727 MYO5AQ9Y4I1 1855 aaKnown RBP10.03□□□□□ -0.8
HDAC3-202ENST00000459727 TACC3Q9Y6A5 838 aa10.03□□□□□ -0.8
HDAC3-202ENST00000459727 V9GY48 417 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-202ENST00000459727 USP17L12C9JPN9 530 aa10.02□□□□□ -0.81
HDAC3-202ENST00000459727 USP17L21D6R901 530 aa10.02□□□□□ -0.81
HDAC3-202ENST00000459727 KIF5CO60282 957 aa10.02□□□□□ -0.81
HDAC3-202ENST00000459727 ZPR1O75312 459 aa10.02□□□□□ -0.81
HDAC3-202ENST00000459727 H2AFXP16104 143 aaPredicted RBP10.02□□□□□ -0.81
HDAC3-202ENST00000459727 BMP6P22004 513 aa10.02□□□□□ -0.81
HDAC3-202ENST00000459727 SMARCA1P28370 1054 aa10.02□□□□□ -0.81
HDAC3-202ENST00000459727 PRPHP41219 470 aa10.02□□□□□ -0.81
HDAC3-202ENST00000459727 CUL4BQ13620 913 aa10.02□□□□□ -0.81
HDAC3-202ENST00000459727 ISM2Q6H9L7 571 aa10.02□□□□□ -0.81
HDAC3-202ENST00000459727 ZNF804AQ7Z570 1209 aa10.02□□□□□ -0.81
HDAC3-202ENST00000459727 ADGRA1Q86SQ6 560 aa10.02□□□□□ -0.81
HDAC3-202ENST00000459727 NBPF5PQ86XG9 351 aaPredicted RBP10.02□□□□□ -0.81
HDAC3-202ENST00000459727 TSC1Q92574 1164 aa10.02□□□□□ -0.81
HDAC3-202ENST00000459727 ACSBG1Q96GR2 724 aa10.02□□□□□ -0.81
HDAC3-202ENST00000459727 AK8Q96MA6 479 aa10.02□□□□□ -0.81
HDAC3-202ENST00000459727 INCENPQ9NQS7 918 aa10.02□□□□□ -0.81
HDAC3-202ENST00000459727 CCDC194A0A1B0GVG4 234 aa10.01□□□□□ -0.81
HDAC3-202ENST00000459727 H7C1D1 291 aa10.01□□□□□ -0.81
HDAC3-202ENST00000459727 FECHP22830 423 aa10.01□□□□□ -0.81
HDAC3-202ENST00000459727 PAK1Q13153 545 aa10.01□□□□□ -0.81
HDAC3-202ENST00000459727 PTGDRQ13258 359 aa10.01□□□□□ -0.81
HDAC3-202ENST00000459727 KCNB1Q14721 858 aa10.01□□□□□ -0.81
HDAC3-202ENST00000459727 GRM4Q14833 912 aa10.01□□□□□ -0.81
HDAC3-202ENST00000459727 ELF2Q15723 593 aa10.01□□□□□ -0.81
HDAC3-202ENST00000459727 ZNF658Q5TYW1 1059 aaPredicted RBP10.01□□□□□ -0.81
HDAC3-202ENST00000459727 TAF3Q5VWG9 929 aa10.01□□□□□ -0.81
HDAC3-202ENST00000459727 TMCO3Q6UWJ1 677 aa10.01□□□□□ -0.81
HDAC3-202ENST00000459727 TMTC1Q8IUR5 882 aa10.01□□□□□ -0.81
HDAC3-202ENST00000459727 TMEM139Q8IV31 216 aa10.01□□□□□ -0.81
HDAC3-202ENST00000459727 REXO1L1PQ8IX06 675 aa10.01□□□□□ -0.81
HDAC3-202ENST00000459727 BLIDQ8IZY5 108 aa10.01□□□□□ -0.81
HDAC3-202ENST00000459727 CCDC82Q8N4S0 544 aa10.01□□□□□ -0.81
HDAC3-202ENST00000459727 GPR161Q8N6U8 529 aaKnown RBP10.01□□□□□ -0.81
HDAC3-202ENST00000459727 PDILTQ8N807 584 aa10.01□□□□□ -0.81
HDAC3-202ENST00000459727 IGSF22Q8N9C0 903 aa10.01□□□□□ -0.81
HDAC3-202ENST00000459727 TC2NQ8N9U0 490 aa10.01□□□□□ -0.81
HDAC3-202ENST00000459727 NKX2-3Q8TAU0 364 aa10.01□□□□□ -0.81
HDAC3-202ENST00000459727 OXER1Q8TDS5 423 aa10.01□□□□□ -0.81
HDAC3-202ENST00000459727 DPF2Q92785 391 aa10.01□□□□□ -0.81
HDAC3-202ENST00000459727 ZMYND15Q9H091 742 aa10.01□□□□□ -0.81
HDAC3-202ENST00000459727 ADD3Q9UEY8 706 aaKnown RBP10.01□□□□□ -0.81
HDAC3-202ENST00000459727 LIMA1Q9UHB6 759 aaKnown RBP10.01□□□□□ -0.81
HDAC3-202ENST00000459727 PCDHA4Q9UN74 947 aa10.01□□□□□ -0.81
HDAC3-202ENST00000459727 LRRC10BA6NIK2 292 aa10□□□□□ -0.81
HDAC3-202ENST00000459727 MFAP3LO75121 409 aa10□□□□□ -0.81
HDAC3-202ENST00000459727 URI1O94763 535 aaPredicted RBP10□□□□□ -0.81
HDAC3-202ENST00000459727 PLEKHA8P1O95397 391 aa10□□□□□ -0.81
HDAC3-202ENST00000459727 LDHBP07195 334 aaKnown RBP10□□□□□ -0.81
HDAC3-202ENST00000459727 PRR29P0C7W0 189 aa10□□□□□ -0.81
HDAC3-202ENST00000459727 ADRA2BP18089 450 aa10□□□□□ -0.81
HDAC3-202ENST00000459727 EEF1GP26641 437 aaKnown RBP10□□□□□ -0.81
HDAC3-202ENST00000459727 USP5P45974 858 aa10□□□□□ -0.81
HDAC3-202ENST00000459727 PPP4CP60510 307 aa10□□□□□ -0.81
HDAC3-202ENST00000459727 GNG11P61952 73 aa10□□□□□ -0.81
HDAC3-202ENST00000459727 DYNLL1P63167 89 aaKnown RBP10□□□□□ -0.81
HDAC3-202ENST00000459727 CBX1P83916 185 aa10□□□□□ -0.81
HDAC3-202ENST00000459727 FMR1Q06787 632 aaKnown RBP eCLIP10□□□□□ -0.81
HDAC3-202ENST00000459727 VPS72Q15906 364 aa10□□□□□ -0.81
HDAC3-202ENST00000459727 E2F4Q16254 413 aa10□□□□□ -0.81
HDAC3-202ENST00000459727 WWC2Q6AWC2 1192 aa10□□□□□ -0.81
HDAC3-202ENST00000459727 TRIM65Q6PJ69 517 aa10□□□□□ -0.81
HDAC3-202ENST00000459727 FAM114A1Q8IWE2 563 aa10□□□□□ -0.81
HDAC3-202ENST00000459727 CEP112Q8N8E3 955 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms