RNA–Protein interactions for RNA: ENST00000458291.6

CAGE1-205, Transcript of cancer antigen 1, humanhuman

TSL 1 (best)

Gene CAGE1, Length 2,989 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-205ENST00000458291 PPM1EQ8WY54 764 aa6.72□□□□□ -1.33
CAGE1-205ENST00000458291 FOXP1Q9H334 677 aaPredicted RBP6.72□□□□□ -1.33
CAGE1-205ENST00000458291 RREB1Q92766 1687 aa6.71□□□□□ -1.33
CAGE1-205ENST00000458291 IFIT3O14879 490 aaKnown RBP6.71□□□□□ -1.34
CAGE1-205ENST00000458291 ERLIN1O75477 346 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 FMNL1O95466 1100 aaPredicted RBP6.71□□□□□ -1.34
CAGE1-205ENST00000458291 BMP15O95972 392 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 CCDC175P0C221 793 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 FMR1Q06787 632 aaKnown RBP eCLIP6.71□□□□□ -1.34
CAGE1-205ENST00000458291 PTPAQ15257 358 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 AKNAD1Q5T1N1 836 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 TMED8Q6PL24 325 aaPredicted RBP6.71□□□□□ -1.34
CAGE1-205ENST00000458291 TBC1D10CQ8IV04 446 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 TEX2Q8IWB9 1127 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 MLKLQ8NB16 471 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 SPATA5Q8NB90 893 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.71□□□□□ -1.34
CAGE1-205ENST00000458291 LY9Q9HBG7 655 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 KCNH3Q9ULD8 1083 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 BTAF1O14981 1849 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 SHANK3Q9BYB0 1731 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 B4E1Z4 1266 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 ANKRD65E5RJM6 399 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 GRIN3BO60391 1043 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 DEXIO95424 95 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 PCP11498 1178 aaKnown RBP6.71□□□□□ -1.34
CAGE1-205ENST00000458291 RFC4P35249 363 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 NTRK3Q16288 839 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 RAD9BQ6WBX8 426 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 MAP3K14Q99558 947 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 NCAPGQ9BPX3 1015 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 PLEKHA4Q9H4M7 779 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 LZTFL1Q9NQ48 299 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 RAI14Q9P0K7 980 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 PCDHA5Q9Y5H7 936 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 ADGRG1Q9Y653 693 aa6.71□□□□□ -1.34
CAGE1-205ENST00000458291 ANKRD36CQ5JPF3 1778 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 TCRBV5S4A2TA0A5A2 114 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 LRRIQ3A6PVS8 624 aaPredicted RBP6.7□□□□□ -1.34
CAGE1-205ENST00000458291 FOXN1O15353 648 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 CHRM1P11229 460 aaPredicted RBP6.7□□□□□ -1.34
CAGE1-205ENST00000458291 FGFR2P21802 821 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 LONRF3Q496Y0 759 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 PI16Q6UXB8 463 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 CYB5R4Q7L1T6 521 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 IFNL3Q8IZI9 196 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 ZNF784Q8NCA9 323 aaPredicted RBP6.7□□□□□ -1.34
CAGE1-205ENST00000458291 LINC00116Q8NCU8 138 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 STAG1Q8WVM7 1258 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 CCDC85AQ96PX6 553 aaPredicted RBP6.7□□□□□ -1.34
CAGE1-205ENST00000458291 NBPF3Q9H094 633 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 FAM204AQ9H8W3 233 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 PIH1D3Q9NQM4 214 aaKnown RBP6.7□□□□□ -1.34
CAGE1-205ENST00000458291 UBN2Q6ZU65 1347 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 RTL9Q8NET4 1388 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 PHACTR2O75167 634 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 MMP1P03956 469 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 RHOXF2BP0C7M4 288 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 CYP19A1P11511 503 aaPredicted RBP6.7□□□□□ -1.34
CAGE1-205ENST00000458291 GPTP24298 496 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 MDM2Q00987 491 aaPredicted RBP6.7□□□□□ -1.34
CAGE1-205ENST00000458291 ITPK1Q13572 414 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 WTAPQ15007 396 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 RTN1Q16799 776 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 PARP10Q53GL7 1025 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 RAB11FIP4Q86YS3 637 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 SUGP1Q8IWZ8 645 aaKnown RBP6.7□□□□□ -1.34
CAGE1-205ENST00000458291 CCDC102AQ96A19 550 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 DRC1Q96MC2 740 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 CLIC6Q96NY7 704 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 PANX2Q96RD6 677 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 MED15Q96RN5 788 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 RHOXF2Q9BQY4 288 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 MED4Q9NPJ6 270 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 NFE2L3Q9Y4A8 694 aa6.7□□□□□ -1.34
CAGE1-205ENST00000458291 LOC102724159A0A0B4J2E5 919 aa6.69□□□□□ -1.34
CAGE1-205ENST00000458291 PPFIA4O75335 1185 aa6.69□□□□□ -1.34
CAGE1-205ENST00000458291 PRPF6O94906 941 aaKnown RBP6.69□□□□□ -1.34
CAGE1-205ENST00000458291 MMP10P09238 476 aa6.69□□□□□ -1.34
CAGE1-205ENST00000458291 PTPREP23469 700 aa6.69□□□□□ -1.34
CAGE1-205ENST00000458291 PHKA1P46020 1223 aa6.69□□□□□ -1.34
CAGE1-205ENST00000458291 TDO2P48775 406 aa6.69□□□□□ -1.34
CAGE1-205ENST00000458291 NT5C2P49902 561 aa6.69□□□□□ -1.34
CAGE1-205ENST00000458291 AKAP17AQ02040 695 aaKnown RBP6.69□□□□□ -1.34
CAGE1-205ENST00000458291 PWP2Q15269 919 aaKnown RBP6.69□□□□□ -1.34
CAGE1-205ENST00000458291 NT5DC1Q5TFE4 455 aa6.69□□□□□ -1.34
CAGE1-205ENST00000458291 EFCAB13Q8IY85 973 aa6.69□□□□□ -1.34
CAGE1-205ENST00000458291 TRMT44Q8IYL2 757 aaKnown RBP6.69□□□□□ -1.34
CAGE1-205ENST00000458291 ZNF34Q8IZ26 560 aa6.69□□□□□ -1.34
CAGE1-205ENST00000458291 AIFM3Q96NN9 605 aa6.69□□□□□ -1.34
CAGE1-205ENST00000458291 MYCBPQ99417 103 aaPredicted RBP6.69□□□□□ -1.34
CAGE1-205ENST00000458291 PYM1Q9BRP8 204 aaKnown RBP6.69□□□□□ -1.34
CAGE1-205ENST00000458291 SLC26A6Q9BXS9 759 aa6.69□□□□□ -1.34
CAGE1-205ENST00000458291 TOMM22Q9NS69 142 aa6.69□□□□□ -1.34
CAGE1-205ENST00000458291 ZSWIM5Q9P217 1185 aa6.69□□□□□ -1.34
CAGE1-205ENST00000458291 MAN1B1Q9UKM7 699 aa6.69□□□□□ -1.34
CAGE1-205ENST00000458291 NHSQ6T4R5 1651 aa6.69□□□□□ -1.34
CAGE1-205ENST00000458291 TIAM2Q8IVF5 1701 aa6.69□□□□□ -1.34
CAGE1-205ENST00000458291 ARAP2Q8WZ64 1704 aa6.69□□□□□ -1.34
CAGE1-205ENST00000458291 TOGARAM1Q9Y4F4 1720 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms