RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 BCO2Q9BYV7 579 aa4.99□□□□□ -1.61
HMGB3P30-201ENST00000457863 ARNT2Q9HBZ2 717 aa4.99□□□□□ -1.61
HMGB3P30-201ENST00000457863 CHST12Q9NRB3 414 aa4.99□□□□□ -1.61
HMGB3P30-201ENST00000457863 HOMER2Q9NSB8 354 aa4.99□□□□□ -1.61
HMGB3P30-201ENST00000457863 CACNA2D2Q9NY47 1150 aa4.99□□□□□ -1.61
HMGB3P30-201ENST00000457863 NAP1L2Q9ULW6 460 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P30-201ENST00000457863 KAT6BQ8WYB5 2073 aa4.98□□□□□ -1.61
HMGB3P30-201ENST00000457863 KRTAP4-8A0A0G2JLE6 195 aa4.98□□□□□ -1.61
HMGB3P30-201ENST00000457863 NRDCO43847 1150 aa4.98□□□□□ -1.61
HMGB3P30-201ENST00000457863 PAPLNO95428 1278 aa4.98□□□□□ -1.61
HMGB3P30-201ENST00000457863 KRT18P05783 430 aaKnown RBP4.98□□□□□ -1.61
HMGB3P30-201ENST00000457863 FAM87AP0C7U9 286 aa4.98□□□□□ -1.61
HMGB3P30-201ENST00000457863 MASP1P48740 699 aa4.98□□□□□ -1.61
HMGB3P30-201ENST00000457863 ERVK-24P63145 666 aa4.98□□□□□ -1.61
HMGB3P30-201ENST00000457863 EXOSC10Q01780 885 aaKnown RBP4.98□□□□□ -1.61
HMGB3P30-201ENST00000457863 ZNF252P-AS1Q0IIN9 211 aa4.98□□□□□ -1.61
HMGB3P30-201ENST00000457863 TTLL4Q14679 1199 aa4.98□□□□□ -1.61
HMGB3P30-201ENST00000457863 ZNF394Q53GI3 561 aa4.98□□□□□ -1.61
HMGB3P30-201ENST00000457863 SYCP2LQ5T4T6 812 aa4.98□□□□□ -1.61
HMGB3P30-201ENST00000457863 ZKSCAN2Q63HK3 967 aa4.98□□□□□ -1.61
HMGB3P30-201ENST00000457863 OGFOD2Q6N063 350 aa4.98□□□□□ -1.61
HMGB3P30-201ENST00000457863 WDR75Q8IWA0 830 aaKnown RBP4.98□□□□□ -1.61
HMGB3P30-201ENST00000457863 SULF2Q8IWU5 870 aa4.98□□□□□ -1.61
HMGB3P30-201ENST00000457863 POU5F2Q8N7G0 328 aa4.98□□□□□ -1.61
HMGB3P30-201ENST00000457863 C3orf58Q8NDZ4 430 aa4.98□□□□□ -1.61
HMGB3P30-201ENST00000457863 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.98□□□□□ -1.61
HMGB3P30-201ENST00000457863 NEUROD6Q96NK8 337 aa4.98□□□□□ -1.61
HMGB3P30-201ENST00000457863 ZC3H12CQ9C0D7 883 aaKnown RBP4.98□□□□□ -1.61
HMGB3P30-201ENST00000457863 ZNF700Q9H0M5 742 aa4.98□□□□□ -1.61
HMGB3P30-201ENST00000457863 PPP4R2Q9NY27 417 aa4.98□□□□□ -1.61
HMGB3P30-201ENST00000457863 SIRPGQ9P1W8 387 aa4.98□□□□□ -1.61
HMGB3P30-201ENST00000457863 CDC45O75419 566 aa4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 BPNT1O95861 308 aa4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 HCLS1P14317 486 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 NME2P22392 152 aa4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 ARNTP27540 789 aa4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 GJA8P48165 433 aa4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 CHMP4BP1P59074 171 aa4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 PLCL1Q15111 1095 aa4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 NFE2Q16621 373 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 ZC3H12AQ5D1E8 599 aaKnown RBP4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 CCDC174Q6PII3 467 aa4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 ZNF574Q6ZN55 896 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 KIAA0907Q7Z7F0 614 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 RNF214Q8ND24 703 aa4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 STK35Q8TDR2 534 aa4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 FBF1Q8TES7 1133 aa4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 IPO4Q8TEX9 1081 aaKnown RBP4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 ANKRD24Q8TF21 1146 aa4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 ISL2Q96A47 359 aa4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 RUNDC1Q96C34 613 aa4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 SRPK1Q96SB4 655 aaKnown RBP4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 DUSP23Q9BVJ7 150 aa4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 SRCIN1Q9C0H9 1055 aa4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 FANCLQ9NW38 375 aa4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 PCOLCE2Q9UKZ9 415 aa4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 PPM1HQ9ULR3 514 aa4.97□□□□□ -1.61
HMGB3P30-201ENST00000457863 PNMA6FA0A0J9YX94 578 aa4.96□□□□□ -1.62
HMGB3P30-201ENST00000457863 TIMM44O43615 452 aa4.96□□□□□ -1.62
HMGB3P30-201ENST00000457863 TSPAN6O43657 245 aa4.96□□□□□ -1.62
HMGB3P30-201ENST00000457863 FOSP01100 380 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P30-201ENST00000457863 CEACAM5P06731 702 aa4.96□□□□□ -1.62
HMGB3P30-201ENST00000457863 VDRP11473 427 aa4.96□□□□□ -1.62
HMGB3P30-201ENST00000457863 FUT4P22083 530 aa4.96□□□□□ -1.62
HMGB3P30-201ENST00000457863 PRKCQQ04759 706 aa4.96□□□□□ -1.62
HMGB3P30-201ENST00000457863 RAPGEF1Q13905 1077 aa4.96□□□□□ -1.62
HMGB3P30-201ENST00000457863 HLTFQ14527 1009 aaKnown RBP eCLIP4.96□□□□□ -1.62
HMGB3P30-201ENST00000457863 PPP2R5AQ15172 486 aa4.96□□□□□ -1.62
HMGB3P30-201ENST00000457863 IFI16Q16666 785 aaKnown RBP4.96□□□□□ -1.62
HMGB3P30-201ENST00000457863 ZNF792Q3KQV3 632 aa4.96□□□□□ -1.62
HMGB3P30-201ENST00000457863 CCDC184Q52MB2 194 aa4.96□□□□□ -1.62
HMGB3P30-201ENST00000457863 GET4Q7L5D6 327 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P30-201ENST00000457863 SPRED2Q7Z698 418 aa4.96□□□□□ -1.62
HMGB3P30-201ENST00000457863 USP48Q86UV5 1035 aa4.96□□□□□ -1.62
HMGB3P30-201ENST00000457863 PLD6Q8N2A8 252 aaKnown RBP4.96□□□□□ -1.62
HMGB3P30-201ENST00000457863 EMILIN2Q9BXX0 1053 aa4.96□□□□□ -1.62
HMGB3P30-201ENST00000457863 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P30-201ENST00000457863 ZHX3Q9H4I2 956 aa4.96□□□□□ -1.62
HMGB3P30-201ENST00000457863 LGR6Q9HBX8 967 aa4.96□□□□□ -1.62
HMGB3P30-201ENST00000457863 VAV3Q9UKW4 847 aa4.96□□□□□ -1.62
HMGB3P30-201ENST00000457863 PCDHGB7Q9Y5F8 929 aa4.96□□□□□ -1.62
HMGB3P30-201ENST00000457863 U3KQE9 123 aa4.96□□□□□ -1.62
HMGB3P30-201ENST00000457863 TBX3O15119 743 aa4.95□□□□□ -1.62
HMGB3P30-201ENST00000457863 MYL1P05976 194 aa4.95□□□□□ -1.62
HMGB3P30-201ENST00000457863 LDHCP07864 332 aa4.95□□□□□ -1.62
HMGB3P30-201ENST00000457863 FAM163BP0C2L3 166 aa4.95□□□□□ -1.62
HMGB3P30-201ENST00000457863 PDE6BP35913 854 aa4.95□□□□□ -1.62
HMGB3P30-201ENST00000457863 MAPK8P45983 427 aa4.95□□□□□ -1.62
HMGB3P30-201ENST00000457863 OXCT1P55809 520 aa4.95□□□□□ -1.62
HMGB3P30-201ENST00000457863 KCTD2Q14681 263 aa4.95□□□□□ -1.62
HMGB3P30-201ENST00000457863 BRD3Q15059 726 aa4.95□□□□□ -1.62
HMGB3P30-201ENST00000457863 TMEM95Q3KNT9 176 aa4.95□□□□□ -1.62
HMGB3P30-201ENST00000457863 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.95□□□□□ -1.62
HMGB3P30-201ENST00000457863 BRDTQ58F21 947 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P30-201ENST00000457863 SCARA3Q6AZY7 606 aa4.95□□□□□ -1.62
HMGB3P30-201ENST00000457863 NXPE4Q6UWF7 544 aa4.95□□□□□ -1.62
HMGB3P30-201ENST00000457863 LRP10Q7Z4F1 713 aa4.95□□□□□ -1.62
HMGB3P30-201ENST00000457863 CREBRFQ8IUR6 639 aa4.95□□□□□ -1.62
HMGB3P30-201ENST00000457863 FAM181AQ8N9Y4 354 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms