RNA–Protein interactions for RNA: ENST00000457463.1

CNOT3-205, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-205ENST00000457463 STOX1Q6ZVD7 989 aa14.46□□□□□ -0.09
CNOT3-205ENST00000457463 RASGRP2Q7LDG7 609 aa14.46□□□□□ -0.09
CNOT3-205ENST00000457463 NUP88Q99567 741 aaPredicted RBP14.46□□□□□ -0.09
CNOT3-205ENST00000457463 ZKSCAN3Q9BRR0 538 aa14.46□□□□□ -0.09
CNOT3-205ENST00000457463 ARHGAP39Q9C0H5 1083 aa14.46□□□□□ -0.09
CNOT3-205ENST00000457463 RPAP3Q9H6T3 665 aaPredicted RBP14.46□□□□□ -0.09
CNOT3-205ENST00000457463 VCPKMTQ9H867 229 aa14.46□□□□□ -0.09
CNOT3-205ENST00000457463 NYAP2Q9P242 653 aa14.46□□□□□ -0.09
CNOT3-205ENST00000457463 CTNNA3Q9UI47 895 aa14.46□□□□□ -0.09
CNOT3-205ENST00000457463 U3KPZ7 1027 aaPredicted RBP14.46□□□□□ -0.09
CNOT3-205ENST00000457463 RAD21O60216 631 aa14.45□□□□□ -0.1
CNOT3-205ENST00000457463 OSBPP22059 807 aa14.45□□□□□ -0.1
CNOT3-205ENST00000457463 COL9A3Q14050 684 aaPredicted RBP14.45□□□□□ -0.1
CNOT3-205ENST00000457463 ANKRD13CQ8N6S4 541 aa14.45□□□□□ -0.1
CNOT3-205ENST00000457463 SMCR8Q8TEV9 937 aaPredicted RBP14.45□□□□□ -0.1
CNOT3-205ENST00000457463 MKL1Q969V6 931 aa14.45□□□□□ -0.1
CNOT3-205ENST00000457463 ANO2Q9NQ90 1003 aa14.45□□□□□ -0.1
CNOT3-205ENST00000457463 ZSWIM8A7E2V4 1837 aa14.44□□□□□ -0.1
CNOT3-205ENST00000457463 USP17L15C9J2P7 530 aa14.44□□□□□ -0.1
CNOT3-205ENST00000457463 USP17L13C9JLJ4 530 aa14.44□□□□□ -0.1
CNOT3-205ENST00000457463 USP17L11C9JVI0 530 aa14.44□□□□□ -0.1
CNOT3-205ENST00000457463 USP17L18D6R9N7 530 aa14.44□□□□□ -0.1
CNOT3-205ENST00000457463 USP17L22D6RA61 530 aa14.44□□□□□ -0.1
CNOT3-205ENST00000457463 USP17L17D6RBQ6 530 aa14.44□□□□□ -0.1
CNOT3-205ENST00000457463 USP17L19D6RCP7 530 aa14.44□□□□□ -0.1
CNOT3-205ENST00000457463 USP17L20D6RJB6 530 aa14.44□□□□□ -0.1
CNOT3-205ENST00000457463 F5H6K3 240 aa14.44□□□□□ -0.1
CNOT3-205ENST00000457463 KDM4AO75164 1064 aa14.44□□□□□ -0.1
CNOT3-205ENST00000457463 TTLL1O95922 423 aa14.44□□□□□ -0.1
CNOT3-205ENST00000457463 NDUFB10O96000 172 aa14.44□□□□□ -0.1
CNOT3-205ENST00000457463 HERVK_113P62684 666 aa14.44□□□□□ -0.1
CNOT3-205ENST00000457463 IRX3P78415 501 aaPredicted RBP14.44□□□□□ -0.1
CNOT3-205ENST00000457463 KLRC3Q07444 240 aa14.44□□□□□ -0.1
CNOT3-205ENST00000457463 USP17L24Q0WX57 530 aa14.44□□□□□ -0.1
CNOT3-205ENST00000457463 KIAA1211Q6ZU35 1233 aa14.44□□□□□ -0.1
CNOT3-205ENST00000457463 RNF41Q9H4P4 317 aaPredicted RBP14.44□□□□□ -0.1
CNOT3-205ENST00000457463 TXNRD2Q9NNW7 524 aa14.44□□□□□ -0.1
CNOT3-205ENST00000457463 FBXO28Q9NVF7 368 aa14.44□□□□□ -0.1
CNOT3-205ENST00000457463 STX8Q9UNK0 236 aa14.44□□□□□ -0.1
CNOT3-205ENST00000457463 LAMA4Q16363 1823 aa14.43□□□□□ -0.1
CNOT3-205ENST00000457463 SLC27A2O14975 620 aa14.43□□□□□ -0.1
CNOT3-205ENST00000457463 NOVP48745 357 aa14.43□□□□□ -0.1
CNOT3-205ENST00000457463 PABPC4Q13310 644 aaKnown RBP eCLIP14.43□□□□□ -0.1
CNOT3-205ENST00000457463 NECTIN1Q15223 517 aa14.43□□□□□ -0.1
CNOT3-205ENST00000457463 Q3C1V9 767 aa14.43□□□□□ -0.1
CNOT3-205ENST00000457463 FAM83BQ5T0W9 1011 aa14.43□□□□□ -0.1
CNOT3-205ENST00000457463 RCSD1Q6JBY9 416 aa14.43□□□□□ -0.1
CNOT3-205ENST00000457463 CYB5R4Q7L1T6 521 aa14.43□□□□□ -0.1
CNOT3-205ENST00000457463 TANGO6Q9C0B7 1094 aa14.43□□□□□ -0.1
CNOT3-205ENST00000457463 SH2D4AQ9H788 454 aa14.43□□□□□ -0.1
CNOT3-205ENST00000457463 ZSWIM5Q9P217 1185 aa14.43□□□□□ -0.1
CNOT3-205ENST00000457463 RBPJLQ9UBG7 517 aa14.43□□□□□ -0.1
CNOT3-205ENST00000457463 PNMA3Q9UL41 463 aa14.43□□□□□ -0.1
CNOT3-205ENST00000457463 MTMR7Q9Y216 660 aa14.43□□□□□ -0.1
CNOT3-205ENST00000457463 SPDYE16A6NNV3 312 aaPredicted RBP14.42□□□□□ -0.1
CNOT3-205ENST00000457463 E7EWF7 191 aa14.42□□□□□ -0.1
CNOT3-205ENST00000457463 CNMDO75829 334 aa14.42□□□□□ -0.1
CNOT3-205ENST00000457463 PCP11498 1178 aaKnown RBP14.42□□□□□ -0.1
CNOT3-205ENST00000457463 LACTBP83111 547 aaPredicted RBP14.42□□□□□ -0.1
CNOT3-205ENST00000457463 CREB3L3Q68CJ9 461 aa14.42□□□□□ -0.1
CNOT3-205ENST00000457463 SAMD1Q6SPF0 538 aaPredicted RBP14.42□□□□□ -0.1
CNOT3-205ENST00000457463 LPAR1Q92633 364 aa14.42□□□□□ -0.1
CNOT3-205ENST00000457463 ESR2Q92731 530 aa14.42□□□□□ -0.1
CNOT3-205ENST00000457463 GOPCQ9HD26 462 aa14.42□□□□□ -0.1
CNOT3-205ENST00000457463 TCP11L1Q9NUJ3 509 aa14.42□□□□□ -0.1
CNOT3-205ENST00000457463 WDR46O15213 610 aaKnown RBP14.41□□□□□ -0.1
CNOT3-205ENST00000457463 SLFN13Q68D06 897 aa14.41□□□□□ -0.1
CNOT3-205ENST00000457463 CASC1Q6TDU7 716 aa14.41□□□□□ -0.1
CNOT3-205ENST00000457463 CHST3Q7LGC8 479 aa14.41□□□□□ -0.1
CNOT3-205ENST00000457463 OTOP1Q7RTM1 612 aa14.41□□□□□ -0.1
CNOT3-205ENST00000457463 ATG4CQ96DT6 458 aa14.41□□□□□ -0.1
CNOT3-205ENST00000457463 ERO1AQ96HE7 468 aa14.41□□□□□ -0.1
CNOT3-205ENST00000457463 TMEM47Q9BQJ4 181 aa14.41□□□□□ -0.1
CNOT3-205ENST00000457463 PAGR1Q9BTK6 254 aa14.41□□□□□ -0.1
CNOT3-205ENST00000457463 MCOLN1Q9GZU1 580 aa14.41□□□□□ -0.1
CNOT3-205ENST00000457463 BTBD7Q9P203 1132 aa14.41□□□□□ -0.1
CNOT3-205ENST00000457463 TRIM17Q9Y577 477 aa14.41□□□□□ -0.1
CNOT3-205ENST00000457463 FLOT1O75955 427 aa14.4□□□□□ -0.1
CNOT3-205ENST00000457463 MCCP23508 829 aa14.4□□□□□ -0.1
CNOT3-205ENST00000457463 DSG3P32926 999 aa14.4□□□□□ -0.1
CNOT3-205ENST00000457463 PSMC4P43686 418 aa14.4□□□□□ -0.1
CNOT3-205ENST00000457463 GCLCP48506 637 aaPredicted RBP14.4□□□□□ -0.1
CNOT3-205ENST00000457463 COG2Q14746 738 aa14.4□□□□□ -0.1
CNOT3-205ENST00000457463 FAM110CQ1W6H9 321 aa14.4□□□□□ -0.1
CNOT3-205ENST00000457463 CTU1Q7Z7A3 348 aaKnown RBP14.4□□□□□ -0.1
CNOT3-205ENST00000457463 RASEFQ8IZ41 740 aa14.4□□□□□ -0.1
CNOT3-205ENST00000457463 GMCL1P1Q8NEA9 526 aa14.4□□□□□ -0.1
CNOT3-205ENST00000457463 TRIM47Q96LD4 638 aa14.4□□□□□ -0.1
CNOT3-205ENST00000457463 KRT23Q9C075 422 aa14.4□□□□□ -0.1
CNOT3-205ENST00000457463 SENP2Q9HC62 589 aa14.4□□□□□ -0.1
CNOT3-205ENST00000457463 MORF4L1Q9UBU8 362 aa14.4□□□□□ -0.1
CNOT3-205ENST00000457463 ANTXR2P58335 489 aa14.39□□□□□ -0.11
CNOT3-205ENST00000457463 KCTD1Q719H9 257 aa14.39□□□□□ -0.11
CNOT3-205ENST00000457463 MB21D2Q8IYB1 491 aaPredicted RBP14.39□□□□□ -0.11
CNOT3-205ENST00000457463 ENAHQ8N8S7 591 aaPredicted RBP14.39□□□□□ -0.11
CNOT3-205ENST00000457463 ZSCAN10Q96SZ4 725 aaPredicted RBP14.39□□□□□ -0.11
CNOT3-205ENST00000457463 PORCNQ9H237 461 aa14.39□□□□□ -0.11
CNOT3-205ENST00000457463 EFCC1Q9HA90 598 aa14.39□□□□□ -0.11
CNOT3-205ENST00000457463 RLFQ13129 1914 aa14.39□□□□□ -0.11
CNOT3-205ENST00000457463 TNKSO95271 1327 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms