RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 COG2Q14746 738 aa27.51■■□□□ 1.99
CBX3-204ENST00000456948 VPS53Q5VIR6 699 aa27.51■■□□□ 1.99
CBX3-204ENST00000456948 RUFY2Q8WXA3 655 aa27.51■■□□□ 1.99
CBX3-204ENST00000456948 CWC22Q9HCG8 908 aaKnown RBP27.51■■□□□ 1.99
CBX3-204ENST00000456948 NYAP2Q9P242 653 aa27.51■■□□□ 1.99
CBX3-204ENST00000456948 ANAPC4Q9UJX5 808 aa27.51■■□□□ 1.99
CBX3-204ENST00000456948 RABGAP1Q9Y3P9 1069 aa27.51■■□□□ 1.99
CBX3-204ENST00000456948 PAGR1Q9BTK6 254 aa27.5■■□□□ 1.99
CBX3-204ENST00000456948 ZMYM6O95789 1325 aa27.49■■□□□ 1.99
CBX3-204ENST00000456948 WDR46O15213 610 aaKnown RBP27.49■■□□□ 1.99
CBX3-204ENST00000456948 RAD21O60216 631 aa27.49■■□□□ 1.99
CBX3-204ENST00000456948 SIAH1Q8IUQ4 282 aa27.49■■□□□ 1.99
CBX3-204ENST00000456948 ARMC5Q96C12 935 aa27.49■■□□□ 1.99
CBX3-204ENST00000456948 ZSWIM8A7E2V4 1837 aa27.48■■□□□ 1.99
CBX3-204ENST00000456948 PCP11498 1178 aaKnown RBP27.48■■□□□ 1.99
CBX3-204ENST00000456948 CTGFP29279 349 aa27.48■■□□□ 1.99
CBX3-204ENST00000456948 MAPK4P31152 587 aa27.48■■□□□ 1.99
CBX3-204ENST00000456948 ERVK-9P63128 1117 aa27.48■■□□□ 1.99
CBX3-204ENST00000456948 ERVK-24P63145 666 aa27.48■■□□□ 1.99
CBX3-204ENST00000456948 TFAP4Q01664 338 aa27.48■■□□□ 1.99
CBX3-204ENST00000456948 LBX2Q6XYB7 198 aa27.48■■□□□ 1.99
CBX3-204ENST00000456948 ZNF589Q86UQ0 364 aaPredicted RBP27.48■■□□□ 1.99
CBX3-204ENST00000456948 CLEC10AQ8IUN9 316 aa27.48■■□□□ 1.99
CBX3-204ENST00000456948 NEDD1Q8NHV4 660 aa27.48■■□□□ 1.99
CBX3-204ENST00000456948 TMEM106CQ9BVX2 250 aa27.48■■□□□ 1.99
CBX3-204ENST00000456948 RBPJLQ9UBG7 517 aa27.48■■□□□ 1.99
CBX3-204ENST00000456948 SYNPO2Q9UMS6 1093 aa27.48■■□□□ 1.99
CBX3-204ENST00000456948 MGAMO43451 1857 aa27.47■■□□□ 1.99
CBX3-204ENST00000456948 TSPY2A6NKD2 308 aa27.47■■□□□ 1.99
CBX3-204ENST00000456948 TTLL1O95922 423 aa27.47■■□□□ 1.99
CBX3-204ENST00000456948 CTDSPL2Q05D32 466 aa27.47■■□□□ 1.99
CBX3-204ENST00000456948 SPICE1Q8N0Z3 855 aa27.47■■□□□ 1.99
CBX3-204ENST00000456948 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.47■■□□□ 1.99
CBX3-204ENST00000456948 TOMM22Q9NS69 142 aa27.47■■□□□ 1.99
CBX3-204ENST00000456948 CLIP2Q9UDT6 1046 aa27.47■■□□□ 1.99
CBX3-204ENST00000456948 FOXP2O15409 715 aa27.46■■□□□ 1.99
CBX3-204ENST00000456948 RANBP6O60518 1105 aaKnown RBP27.46■■□□□ 1.99
CBX3-204ENST00000456948 FLOT1O75955 427 aa27.46■■□□□ 1.99
CBX3-204ENST00000456948 CENPBP07199 599 aaPredicted RBP27.46■■□□□ 1.99
CBX3-204ENST00000456948 PRKCZQ05513 592 aa27.46■■□□□ 1.99
CBX3-204ENST00000456948 MB21D1Q8N884 522 aa27.46■■□□□ 1.99
CBX3-204ENST00000456948 SLAIN1Q8ND83 568 aa27.46■■□□□ 1.99
CBX3-204ENST00000456948 CCDC136Q96JN2 1154 aa27.46■■□□□ 1.99
CBX3-204ENST00000456948 RNF41Q9H4P4 317 aaPredicted RBP27.46■■□□□ 1.99
CBX3-204ENST00000456948 BIN2Q9UBW5 565 aaPredicted RBP27.46■■□□□ 1.99
CBX3-204ENST00000456948 CTNNA3Q9UI47 895 aa27.46■■□□□ 1.99
CBX3-204ENST00000456948 GRK4P32298 578 aa27.45■■□□□ 1.98
CBX3-204ENST00000456948 FLT3LGP49771 235 aa27.45■■□□□ 1.98
CBX3-204ENST00000456948 MTMR4Q9NYA4 1195 aa27.45■■□□□ 1.98
CBX3-204ENST00000456948 HTTP42858 3142 aa27.44■■□□□ 1.98
CBX3-204ENST00000456948 ZNF213O14771 459 aa27.44■■□□□ 1.98
CBX3-204ENST00000456948 ORC4O43929 436 aa27.44■■□□□ 1.98
CBX3-204ENST00000456948 GSPT1P15170 499 aaKnown RBP27.44■■□□□ 1.98
CBX3-204ENST00000456948 NT5C2P49902 561 aa27.44■■□□□ 1.98
CBX3-204ENST00000456948 UBXN2AP68543 259 aa27.44■■□□□ 1.98
CBX3-204ENST00000456948 IRF5Q13568 498 aa27.44■■□□□ 1.98
CBX3-204ENST00000456948 FAM47AQ5JRC9 791 aa27.44■■□□□ 1.98
CBX3-204ENST00000456948 MFSD6Q6ZSS7 791 aa27.44■■□□□ 1.98
CBX3-204ENST00000456948 MKL1Q969V6 931 aa27.44■■□□□ 1.98
CBX3-204ENST00000456948 CEP95Q96GE4 821 aa27.44■■□□□ 1.98
CBX3-204ENST00000456948 TXNRD2Q9NNW7 524 aa27.44■■□□□ 1.98
CBX3-204ENST00000456948 IGKV6D-41A0A0C4DH26 115 aa27.43■■□□□ 1.98
CBX3-204ENST00000456948 ZNF333Q96JL9 665 aa27.43■■□□□ 1.98
CBX3-204ENST00000456948 DSCC1Q9BVC3 393 aa27.43■■□□□ 1.98
CBX3-204ENST00000456948 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.43■■□□□ 1.98
CBX3-204ENST00000456948 PLIN4Q96Q06 1357 aa27.43■■□□□ 1.98
CBX3-204ENST00000456948 RAD50Q92878 1312 aa27.42■■□□□ 1.98
CBX3-204ENST00000456948 SPDYE16A6NNV3 312 aaPredicted RBP27.42■■□□□ 1.98
CBX3-204ENST00000456948 F5H6K3 240 aa27.42■■□□□ 1.98
CBX3-204ENST00000456948 ADCY3O60266 1144 aa27.42■■□□□ 1.98
CBX3-204ENST00000456948 KLRC3Q07444 240 aa27.42■■□□□ 1.98
CBX3-204ENST00000456948 PXYLP1Q8TE99 480 aa27.42■■□□□ 1.98
CBX3-204ENST00000456948 SOCS4Q8WXH5 440 aa27.42■■□□□ 1.98
CBX3-204ENST00000456948 NUDT12Q9BQG2 462 aa27.42■■□□□ 1.98
CBX3-204ENST00000456948 GABRQQ9UN88 632 aa27.42■■□□□ 1.98
CBX3-204ENST00000456948 MYCP01106 439 aaPredicted RBP27.41■■□□□ 1.98
CBX3-204ENST00000456948 FGRP09769 529 aa27.41■■□□□ 1.98
CBX3-204ENST00000456948 DSG3P32926 999 aa27.41■■□□□ 1.98
CBX3-204ENST00000456948 IMMTQ16891 758 aaKnown RBP27.41■■□□□ 1.98
CBX3-204ENST00000456948 RRP12Q5JTH9 1297 aaKnown RBP27.41■■□□□ 1.98
CBX3-204ENST00000456948 AKNAD1Q5T1N1 836 aa27.41■■□□□ 1.98
CBX3-204ENST00000456948 SH3TC2Q8TF17 1288 aa27.41■■□□□ 1.98
CBX3-204ENST00000456948 IVNS1ABPQ9Y6Y0 642 aa27.41■■□□□ 1.98
CBX3-204ENST00000456948 CENPFP49454 3210 aa27.4■■□□□ 1.98
CBX3-204ENST00000456948 POTEFA5A3E0 1075 aa27.4■■□□□ 1.98
CBX3-204ENST00000456948 HAND2P61296 217 aa27.4■■□□□ 1.98
CBX3-204ENST00000456948 Q3C1V9 767 aa27.4■■□□□ 1.98
CBX3-204ENST00000456948 KIAA1755Q5JYT7 1200 aa27.4■■□□□ 1.98
CBX3-204ENST00000456948 WDR78Q5VTH9 848 aa27.4■■□□□ 1.98
CBX3-204ENST00000456948 SAMD1Q6SPF0 538 aaPredicted RBP27.4■■□□□ 1.98
CBX3-204ENST00000456948 PLEKHH3Q7Z736 793 aa27.4■■□□□ 1.98
CBX3-204ENST00000456948 STX8Q9UNK0 236 aa27.4■■□□□ 1.98
CBX3-204ENST00000456948 GMCL1P1Q8NEA9 526 aa27.39■■□□□ 1.98
CBX3-204ENST00000456948 GREB1LQ9C091 1923 aaPredicted RBP27.39■■□□□ 1.97
CBX3-204ENST00000456948 TNRC18O15417 2968 aaPredicted RBP27.38■■□□□ 1.97
CBX3-204ENST00000456948 NDUFB10O96000 172 aa27.38■■□□□ 1.97
CBX3-204ENST00000456948 CHMLP26374 656 aa27.38■■□□□ 1.97
CBX3-204ENST00000456948 FAM83BQ5T0W9 1011 aa27.38■■□□□ 1.97
CBX3-204ENST00000456948 TRMT44Q8IYL2 757 aaKnown RBP27.38■■□□□ 1.97
CBX3-204ENST00000456948 STAG1Q8WVM7 1258 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms