RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 FMR1Q06787 632 aaKnown RBP eCLIP20.98■□□□□ 0.95
SEMA3B-209ENST00000456560 SH3RF1Q7Z6J0 888 aa20.98■□□□□ 0.95
SEMA3B-209ENST00000456560 DZIP1Q86YF9 867 aaKnown RBP20.98■□□□□ 0.95
SEMA3B-209ENST00000456560 ENOX1Q8TC92 643 aaKnown RBP20.98■□□□□ 0.95
SEMA3B-209ENST00000456560 DACH1Q9UI36 760 aa20.98■□□□□ 0.95
SEMA3B-209ENST00000456560 LEMD3Q9Y2U8 911 aa20.98■□□□□ 0.95
SEMA3B-209ENST00000456560 PSDA5PKW4 1024 aaPredicted RBP20.98■□□□□ 0.95
SEMA3B-209ENST00000456560 USP17L8P0C7I0 530 aa20.98■□□□□ 0.95
SEMA3B-209ENST00000456560 SCG2P13521 617 aa20.98■□□□□ 0.95
SEMA3B-209ENST00000456560 ZNF18P17022 549 aa20.98■□□□□ 0.95
SEMA3B-209ENST00000456560 NCBP1Q09161 790 aaKnown RBP20.98■□□□□ 0.95
SEMA3B-209ENST00000456560 GRAPQ13588 217 aa20.98■□□□□ 0.95
SEMA3B-209ENST00000456560 GRAPLQ8TC17 118 aaPredicted RBP20.98■□□□□ 0.95
SEMA3B-209ENST00000456560 EPSTI1Q96J88 318 aa20.98■□□□□ 0.95
SEMA3B-209ENST00000456560 MCM9Q9NXL9 1143 aa20.98■□□□□ 0.95
SEMA3B-209ENST00000456560 NT5C2P49902 561 aa20.97■□□□□ 0.95
SEMA3B-209ENST00000456560 PFKFB3Q16875 520 aaPredicted RBP20.97■□□□□ 0.95
SEMA3B-209ENST00000456560 CFAP100Q494V2 611 aa20.97■□□□□ 0.95
SEMA3B-209ENST00000456560 TTC38Q5R3I4 469 aa20.97■□□□□ 0.95
SEMA3B-209ENST00000456560 C12orf60Q5U649 245 aa20.97■□□□□ 0.95
SEMA3B-209ENST00000456560 WDR66Q8TBY9 1149 aa20.97■□□□□ 0.95
SEMA3B-209ENST00000456560 ANKS1AQ92625 1134 aa20.97■□□□□ 0.95
SEMA3B-209ENST00000456560 MED15Q96RN5 788 aa20.97■□□□□ 0.95
SEMA3B-209ENST00000456560 INTS13Q9NVM9 706 aa20.97■□□□□ 0.95
SEMA3B-209ENST00000456560 TSPY2A6NKD2 308 aa20.97■□□□□ 0.95
SEMA3B-209ENST00000456560 ZNF174Q15697 407 aa20.97■□□□□ 0.95
SEMA3B-209ENST00000456560 SLC51AQ86UW1 340 aa20.97■□□□□ 0.95
SEMA3B-209ENST00000456560 TMX1Q9H3N1 280 aa20.97■□□□□ 0.95
SEMA3B-209ENST00000456560 TMEM232C9JQI7 657 aa20.96■□□□□ 0.95
SEMA3B-209ENST00000456560 KIF2AO00139 706 aaPredicted RBP20.96■□□□□ 0.95
SEMA3B-209ENST00000456560 SLFN14P0C7P3 912 aa20.96■□□□□ 0.95
SEMA3B-209ENST00000456560 ATP2C1P98194 919 aaPredicted RBP20.96■□□□□ 0.95
SEMA3B-209ENST00000456560 ZNF827Q17R98 1081 aa20.96■□□□□ 0.95
SEMA3B-209ENST00000456560 TRAPPC3LQ5T215 181 aa20.96■□□□□ 0.95
SEMA3B-209ENST00000456560 ZNF592Q92610 1267 aa20.96■□□□□ 0.95
SEMA3B-209ENST00000456560 LDHBP07195 334 aaKnown RBP20.96■□□□□ 0.95
SEMA3B-209ENST00000456560 RFC4P35249 363 aa20.96■□□□□ 0.95
SEMA3B-209ENST00000456560 NFIXQ14938 502 aa20.96■□□□□ 0.95
SEMA3B-209ENST00000456560 C15orf52Q6ZUT6 534 aaKnown RBP20.96■□□□□ 0.95
SEMA3B-209ENST00000456560 DGKHQ86XP1 1220 aa20.96■□□□□ 0.95
SEMA3B-209ENST00000456560 SYMPKQ92797 1274 aaKnown RBP20.96■□□□□ 0.95
SEMA3B-209ENST00000456560 DHX58Q96C10 678 aa20.96■□□□□ 0.95
SEMA3B-209ENST00000456560 PPP1R13BQ96KQ4 1090 aa20.96■□□□□ 0.95
SEMA3B-209ENST00000456560 IL17RBQ9NRM6 502 aa20.96■□□□□ 0.95
SEMA3B-209ENST00000456560 ANKIB1Q9P2G1 1089 aa20.96■□□□□ 0.95
SEMA3B-209ENST00000456560 NRDCO43847 1150 aa20.95■□□□□ 0.94
SEMA3B-209ENST00000456560 VEGFAP15692 232 aaPredicted RBP20.95■□□□□ 0.94
SEMA3B-209ENST00000456560 LRRC4BQ9NT99 713 aa20.95■□□□□ 0.94
SEMA3B-209ENST00000456560 NFE2L3Q9Y4A8 694 aa20.95■□□□□ 0.94
SEMA3B-209ENST00000456560 ROBO3Q96MS0 1386 aa20.95■□□□□ 0.94
SEMA3B-209ENST00000456560 ERCC5P28715 1186 aaPredicted RBP20.94■□□□□ 0.94
SEMA3B-209ENST00000456560 TRAPPC10P48553 1259 aa20.94■□□□□ 0.94
SEMA3B-209ENST00000456560 PLCD1P51178 756 aa20.94■□□□□ 0.94
SEMA3B-209ENST00000456560 PPP4CP60510 307 aa20.94■□□□□ 0.94
SEMA3B-209ENST00000456560 TFAP4Q01664 338 aa20.94■□□□□ 0.94
SEMA3B-209ENST00000456560 CT47A1Q5JQC4 288 aaPredicted RBP20.94■□□□□ 0.94
SEMA3B-209ENST00000456560 SH3RF3Q8TEJ3 882 aaPredicted RBP20.94■□□□□ 0.94
SEMA3B-209ENST00000456560 PAGE5Q96GU1 130 aa20.94■□□□□ 0.94
SEMA3B-209ENST00000456560 FEZ1Q99689 392 aa20.94■□□□□ 0.94
SEMA3B-209ENST00000456560 KIF5BP33176 963 aa20.94■□□□□ 0.94
SEMA3B-209ENST00000456560 NLRP5P59047 1200 aa20.94■□□□□ 0.94
SEMA3B-209ENST00000456560 TBX2Q13207 712 aaPredicted RBP20.94■□□□□ 0.94
SEMA3B-209ENST00000456560 PTGDRQ13258 359 aa20.94■□□□□ 0.94
SEMA3B-209ENST00000456560 GRIK5Q16478 980 aa20.94■□□□□ 0.94
SEMA3B-209ENST00000456560 XDHP47989 1333 aa20.94■□□□□ 0.94
SEMA3B-209ENST00000456560 ADAMTS3O15072 1205 aa20.93■□□□□ 0.94
SEMA3B-209ENST00000456560 TOP1P11387 765 aaKnown RBP20.93■□□□□ 0.94
SEMA3B-209ENST00000456560 CCDC34Q96HJ3 373 aa20.93■□□□□ 0.94
SEMA3B-209ENST00000456560 KAT14Q9H8E8 782 aa20.93■□□□□ 0.94
SEMA3B-209ENST00000456560 NPHP1O15259 732 aa20.93■□□□□ 0.94
SEMA3B-209ENST00000456560 USP5P45974 858 aa20.93■□□□□ 0.94
SEMA3B-209ENST00000456560 GSTO1P78417 241 aa20.93■□□□□ 0.94
SEMA3B-209ENST00000456560 DYNLL2Q96FJ2 89 aa20.93■□□□□ 0.94
SEMA3B-209ENST00000456560 DPYDQ12882 1025 aa20.92■□□□□ 0.94
SEMA3B-209ENST00000456560 TRMT44Q8IYL2 757 aaKnown RBP20.92■□□□□ 0.94
SEMA3B-209ENST00000456560 KIF18AQ8NI77 898 aa20.92■□□□□ 0.94
SEMA3B-209ENST00000456560 GRM4Q14833 912 aa20.92■□□□□ 0.94
SEMA3B-209ENST00000456560 PIK3AP1Q6ZUJ8 805 aa20.92■□□□□ 0.94
SEMA3B-209ENST00000456560 ZNF804AQ7Z570 1209 aa20.92■□□□□ 0.94
SEMA3B-209ENST00000456560 CNBD1Q8NA66 436 aa20.92■□□□□ 0.94
SEMA3B-209ENST00000456560 SH3GLB2Q9NR46 395 aa20.92■□□□□ 0.94
SEMA3B-209ENST00000456560 TCP11L1Q9NUJ3 509 aa20.92■□□□□ 0.94
SEMA3B-209ENST00000456560 BAZ2BQ9UIF8 2168 aaKnown RBP20.91■□□□□ 0.94
SEMA3B-209ENST00000456560 AFMP43652 599 aa20.91■□□□□ 0.94
SEMA3B-209ENST00000456560 DIXDC1Q155Q3 683 aa20.91■□□□□ 0.94
SEMA3B-209ENST00000456560 SLC4A8Q2Y0W8 1093 aa20.91■□□□□ 0.94
SEMA3B-209ENST00000456560 CCDC178Q5BJE1 867 aa20.91■□□□□ 0.94
SEMA3B-209ENST00000456560 PNMA1Q8ND90 353 aa20.91■□□□□ 0.94
SEMA3B-209ENST00000456560 OGFRQ9NZT2 677 aa20.91■□□□□ 0.94
SEMA3B-209ENST00000456560 VWA3AA6NCI4 1184 aa20.9■□□□□ 0.94
SEMA3B-209ENST00000456560 BAG3O95817 575 aa20.9■□□□□ 0.94
SEMA3B-209ENST00000456560 TUBB4AP04350 444 aa20.9■□□□□ 0.94
SEMA3B-209ENST00000456560 E2F4Q16254 413 aa20.9■□□□□ 0.94
SEMA3B-209ENST00000456560 TMEM139Q8IV31 216 aa20.9■□□□□ 0.94
SEMA3B-209ENST00000456560 GSDMAQ96QA5 445 aa20.9■□□□□ 0.94
SEMA3B-209ENST00000456560 SAMSN1Q9NSI8 373 aaKnown RBP20.9■□□□□ 0.94
SEMA3B-209ENST00000456560 LDHCP07864 332 aa20.9■□□□□ 0.94
SEMA3B-209ENST00000456560 CALML3P27482 149 aa20.9■□□□□ 0.94
SEMA3B-209ENST00000456560 CUL4BQ13620 913 aa20.9■□□□□ 0.94
SEMA3B-209ENST00000456560 IL17AQ16552 155 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms