RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 ZNF589Q86UQ0 364 aaPredicted RBP21.47■■□□□ 1.03
PDLIM2-215ENST00000456545 SIAH1Q8IUQ4 282 aa21.47■■□□□ 1.03
PDLIM2-215ENST00000456545 SPICE1Q8N0Z3 855 aa21.47■■□□□ 1.03
PDLIM2-215ENST00000456545 VCPKMTQ9H867 229 aa21.47■■□□□ 1.03
PDLIM2-215ENST00000456545 HOXC10Q9NYD6 342 aa21.47■■□□□ 1.03
PDLIM2-215ENST00000456545 ZSWIM8A7E2V4 1837 aa21.46■■□□□ 1.03
PDLIM2-215ENST00000456545 SOX10P56693 466 aa21.46■■□□□ 1.03
PDLIM2-215ENST00000456545 TFAP4Q01664 338 aa21.46■■□□□ 1.03
PDLIM2-215ENST00000456545 COG2Q14746 738 aa21.46■■□□□ 1.03
PDLIM2-215ENST00000456545 CENPQQ7L2Z9 268 aaPredicted RBP21.46■■□□□ 1.03
PDLIM2-215ENST00000456545 MORF4L1Q9UBU8 362 aa21.46■■□□□ 1.03
PDLIM2-215ENST00000456545 BIN2Q9UBW5 565 aaPredicted RBP21.46■■□□□ 1.03
PDLIM2-215ENST00000456545 CLIP2Q9UDT6 1046 aa21.46■■□□□ 1.03
PDLIM2-215ENST00000456545 TSPY2A6NKD2 308 aa21.45■■□□□ 1.02
PDLIM2-215ENST00000456545 FOXP2O15409 715 aa21.45■■□□□ 1.02
PDLIM2-215ENST00000456545 FAM47AQ5JRC9 791 aa21.45■■□□□ 1.02
PDLIM2-215ENST00000456545 NYAP2Q9P242 653 aa21.45■■□□□ 1.02
PDLIM2-215ENST00000456545 RBPJLQ9UBG7 517 aa21.45■■□□□ 1.02
PDLIM2-215ENST00000456545 RABGAP1Q9Y3P9 1069 aa21.45■■□□□ 1.02
PDLIM2-215ENST00000456545 MGAMO43451 1857 aa21.45■■□□□ 1.02
PDLIM2-215ENST00000456545 WDR46O15213 610 aaKnown RBP21.44■■□□□ 1.02
PDLIM2-215ENST00000456545 RANBP6O60518 1105 aaKnown RBP21.44■■□□□ 1.02
PDLIM2-215ENST00000456545 GSPT1P15170 499 aaKnown RBP21.44■■□□□ 1.02
PDLIM2-215ENST00000456545 ERVK-9P63128 1117 aa21.44■■□□□ 1.02
PDLIM2-215ENST00000456545 ERVK-24P63145 666 aa21.44■■□□□ 1.02
PDLIM2-215ENST00000456545 CCNA1P78396 465 aa21.44■■□□□ 1.02
PDLIM2-215ENST00000456545 PRKCZQ05513 592 aa21.44■■□□□ 1.02
PDLIM2-215ENST00000456545 RRP12Q5JTH9 1297 aaKnown RBP21.44■■□□□ 1.02
PDLIM2-215ENST00000456545 RUFY2Q8WXA3 655 aa21.44■■□□□ 1.02
PDLIM2-215ENST00000456545 CCDC136Q96JN2 1154 aa21.44■■□□□ 1.02
PDLIM2-215ENST00000456545 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.44■■□□□ 1.02
PDLIM2-215ENST00000456545 TMEM106CQ9BVX2 250 aa21.44■■□□□ 1.02
PDLIM2-215ENST00000456545 ANAPC4Q9UJX5 808 aa21.44■■□□□ 1.02
PDLIM2-215ENST00000456545 GABRQQ9UN88 632 aa21.44■■□□□ 1.02
PDLIM2-215ENST00000456545 FLOT1O75955 427 aa21.43■■□□□ 1.02
PDLIM2-215ENST00000456545 MYCP01106 439 aaPredicted RBP21.43■■□□□ 1.02
PDLIM2-215ENST00000456545 FLT3LGP49771 235 aa21.43■■□□□ 1.02
PDLIM2-215ENST00000456545 PPP4R3BQ5MIZ7 849 aa21.43■■□□□ 1.02
PDLIM2-215ENST00000456545 NEDD1Q8NHV4 660 aa21.43■■□□□ 1.02
PDLIM2-215ENST00000456545 SH3TC2Q8TF17 1288 aa21.43■■□□□ 1.02
PDLIM2-215ENST00000456545 TXNRD2Q9NNW7 524 aa21.43■■□□□ 1.02
PDLIM2-215ENST00000456545 ZNF213O14771 459 aa21.42■■□□□ 1.02
PDLIM2-215ENST00000456545 PEX10O60683 326 aa21.42■■□□□ 1.02
PDLIM2-215ENST00000456545 TTLL1O95922 423 aa21.42■■□□□ 1.02
PDLIM2-215ENST00000456545 CENPBP07199 599 aaPredicted RBP21.42■■□□□ 1.02
PDLIM2-215ENST00000456545 MAPK4P31152 587 aa21.42■■□□□ 1.02
PDLIM2-215ENST00000456545 GRK4P32298 578 aa21.42■■□□□ 1.02
PDLIM2-215ENST00000456545 HAND2P61296 217 aa21.42■■□□□ 1.02
PDLIM2-215ENST00000456545 Q3C1V9 767 aa21.42■■□□□ 1.02
PDLIM2-215ENST00000456545 KIAA1755Q5JYT7 1200 aa21.42■■□□□ 1.02
PDLIM2-215ENST00000456545 WDR78Q5VTH9 848 aa21.42■■□□□ 1.02
PDLIM2-215ENST00000456545 ARMC5Q96C12 935 aa21.42■■□□□ 1.02
PDLIM2-215ENST00000456545 CEP95Q96GE4 821 aa21.42■■□□□ 1.02
PDLIM2-215ENST00000456545 INCENPQ9NQS7 918 aa21.42■■□□□ 1.02
PDLIM2-215ENST00000456545 MFSD6Q6ZSS7 791 aa21.41■■□□□ 1.02
PDLIM2-215ENST00000456545 MTMR4Q9NYA4 1195 aa21.41■■□□□ 1.02
PDLIM2-215ENST00000456545 ISY1Q9ULR0 285 aaKnown RBP21.41■■□□□ 1.02
PDLIM2-215ENST00000456545 ZMYM6O95789 1325 aa21.4■■□□□ 1.02
PDLIM2-215ENST00000456545 SPDYE16A6NNV3 312 aaPredicted RBP21.4■■□□□ 1.02
PDLIM2-215ENST00000456545 F5H6K3 240 aa21.4■■□□□ 1.02
PDLIM2-215ENST00000456545 ADCY3O60266 1144 aa21.4■■□□□ 1.02
PDLIM2-215ENST00000456545 DSG3P32926 999 aa21.4■■□□□ 1.02
PDLIM2-215ENST00000456545 UBXN2AP68543 259 aa21.4■■□□□ 1.02
PDLIM2-215ENST00000456545 KLRC3Q07444 240 aa21.4■■□□□ 1.02
PDLIM2-215ENST00000456545 RNF41Q9H4P4 317 aaPredicted RBP21.4■■□□□ 1.02
PDLIM2-215ENST00000456545 CTNNA3Q9UI47 895 aa21.4■■□□□ 1.02
PDLIM2-215ENST00000456545 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.4■■□□□ 1.02
PDLIM2-215ENST00000456545 IGKV6D-41A0A0C4DH26 115 aa21.39■■□□□ 1.01
PDLIM2-215ENST00000456545 PLS1Q14651 629 aa21.39■■□□□ 1.01
PDLIM2-215ENST00000456545 FAM83BQ5T0W9 1011 aa21.39■■□□□ 1.01
PDLIM2-215ENST00000456545 LBX2Q6XYB7 198 aa21.39■■□□□ 1.01
PDLIM2-215ENST00000456545 SLAIN1Q8ND83 568 aa21.39■■□□□ 1.01
PDLIM2-215ENST00000456545 ZNF333Q96JL9 665 aa21.39■■□□□ 1.01
PDLIM2-215ENST00000456545 NUDT12Q9BQG2 462 aa21.39■■□□□ 1.01
PDLIM2-215ENST00000456545 DSCC1Q9BVC3 393 aa21.39■■□□□ 1.01
PDLIM2-215ENST00000456545 STX8Q9UNK0 236 aa21.39■■□□□ 1.01
PDLIM2-215ENST00000456545 ORC4O43929 436 aa21.38■■□□□ 1.01
PDLIM2-215ENST00000456545 PCP11498 1178 aaKnown RBP21.38■■□□□ 1.01
PDLIM2-215ENST00000456545 IRF5Q13568 498 aa21.38■■□□□ 1.01
PDLIM2-215ENST00000456545 IMMTQ16891 758 aaKnown RBP21.38■■□□□ 1.01
PDLIM2-215ENST00000456545 AKNAD1Q5T1N1 836 aa21.38■■□□□ 1.01
PDLIM2-215ENST00000456545 PLEKHH3Q7Z736 793 aa21.38■■□□□ 1.01
PDLIM2-215ENST00000456545 MB21D1Q8N884 522 aa21.38■■□□□ 1.01
PDLIM2-215ENST00000456545 MKL1Q969V6 931 aa21.38■■□□□ 1.01
PDLIM2-215ENST00000456545 PORCNQ9H237 461 aa21.38■■□□□ 1.01
PDLIM2-215ENST00000456545 BTBD7Q9P203 1132 aa21.38■■□□□ 1.01
PDLIM2-215ENST00000456545 CTDP1Q9Y5B0 961 aaPredicted RBP21.38■■□□□ 1.01
PDLIM2-215ENST00000456545 IVNS1ABPQ9Y6Y0 642 aa21.38■■□□□ 1.01
PDLIM2-215ENST00000456545 CNMDO75829 334 aa21.37■■□□□ 1.01
PDLIM2-215ENST00000456545 CHMLP26374 656 aa21.37■■□□□ 1.01
PDLIM2-215ENST00000456545 MLLT1Q03111 559 aaPredicted RBP21.37■■□□□ 1.01
PDLIM2-215ENST00000456545 LRRC47Q8N1G4 583 aaKnown RBP21.37■■□□□ 1.01
PDLIM2-215ENST00000456545 ATG4CQ96DT6 458 aa21.37■■□□□ 1.01
PDLIM2-215ENST00000456545 MYH4Q9Y623 1939 aa21.37■■□□□ 1.01
PDLIM2-215ENST00000456545 RAD50Q92878 1312 aa21.36■■□□□ 1.01
PDLIM2-215ENST00000456545 NDUFB10O96000 172 aa21.36■■□□□ 1.01
PDLIM2-215ENST00000456545 CYP2B6P20813 491 aa21.36■■□□□ 1.01
PDLIM2-215ENST00000456545 SLFN13Q68D06 897 aa21.36■■□□□ 1.01
PDLIM2-215ENST00000456545 POTEEQ6S8J3 1075 aa21.36■■□□□ 1.01
PDLIM2-215ENST00000456545 GPR142Q7Z601 462 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms