RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 COG2Q14746 738 aa21.35■■□□□ 1.01
MSH6-207ENST00000456246 ZMYM1Q5SVZ6 1142 aa21.35■■□□□ 1.01
MSH6-207ENST00000456246 PLEKHH3Q7Z736 793 aa21.35■■□□□ 1.01
MSH6-207ENST00000456246 SMC5Q8IY18 1101 aa21.35■■□□□ 1.01
MSH6-207ENST00000456246 TANGO6Q9C0B7 1094 aa21.35■■□□□ 1.01
MSH6-207ENST00000456246 VCPKMTQ9H867 229 aa21.35■■□□□ 1.01
MSH6-207ENST00000456246 MKNK2Q9HBH9 465 aa21.35■■□□□ 1.01
MSH6-207ENST00000456246 MINDY4BA8MYZ0 360 aa21.34■■□□□ 1.01
MSH6-207ENST00000456246 WDR46O15213 610 aaKnown RBP21.34■■□□□ 1.01
MSH6-207ENST00000456246 Q3C1V9 767 aa21.34■■□□□ 1.01
MSH6-207ENST00000456246 GPR142Q7Z601 462 aa21.34■■□□□ 1.01
MSH6-207ENST00000456246 MB21D1Q8N884 522 aa21.34■■□□□ 1.01
MSH6-207ENST00000456246 SHISA4Q96DD7 197 aa21.34■■□□□ 1.01
MSH6-207ENST00000456246 UNC93B1Q9H1C4 597 aa21.34■■□□□ 1.01
MSH6-207ENST00000456246 PORCNQ9H237 461 aa21.34■■□□□ 1.01
MSH6-207ENST00000456246 EPB41L4AQ9HCS5 686 aaPredicted RBP21.34■■□□□ 1.01
MSH6-207ENST00000456246 PLXNB2O15031 1838 aa21.34■■□□□ 1.01
MSH6-207ENST00000456246 SMIM22K7EJ46 135 aa21.33■■□□□ 1.01
MSH6-207ENST00000456246 RGS2P41220 211 aa21.33■■□□□ 1.01
MSH6-207ENST00000456246 POTEEQ6S8J3 1075 aa21.33■■□□□ 1.01
MSH6-207ENST00000456246 SIAH1Q8IUQ4 282 aa21.33■■□□□ 1.01
MSH6-207ENST00000456246 IFNL3Q8IZI9 196 aa21.33■■□□□ 1.01
MSH6-207ENST00000456246 U2AF1L4Q8WU68 220 aaKnown RBP21.33■■□□□ 1.01
MSH6-207ENST00000456246 GOPCQ9HD26 462 aa21.33■■□□□ 1.01
MSH6-207ENST00000456246 PAK6Q9NQU5 681 aaPredicted RBP21.33■■□□□ 1.01
MSH6-207ENST00000456246 GREB1LQ9C091 1923 aaPredicted RBP21.33■■□□□ 1
MSH6-207ENST00000456246 CNMDO75829 334 aa21.32■■□□□ 1
MSH6-207ENST00000456246 SGPL1O95470 568 aa21.32■■□□□ 1
MSH6-207ENST00000456246 SLC3A2P08195 630 aaKnown RBP21.32■■□□□ 1
MSH6-207ENST00000456246 EEF2P13639 858 aaKnown RBP21.32■■□□□ 1
MSH6-207ENST00000456246 RASA1P20936 1047 aa21.32■■□□□ 1
MSH6-207ENST00000456246 NAPBQ9H115 298 aa21.32■■□□□ 1
MSH6-207ENST00000456246 PEX10O60683 326 aa21.31■■□□□ 1
MSH6-207ENST00000456246 CYP2B6P20813 491 aa21.31■■□□□ 1
MSH6-207ENST00000456246 ATP2B2Q01814 1243 aa21.31■■□□□ 1
MSH6-207ENST00000456246 MORN1Q5T089 497 aa21.31■■□□□ 1
MSH6-207ENST00000456246 CLEC10AQ8IUN9 316 aa21.31■■□□□ 1
MSH6-207ENST00000456246 USP6NLQ92738 828 aa21.31■■□□□ 1
MSH6-207ENST00000456246 APBA2Q99767 749 aa21.31■■□□□ 1
MSH6-207ENST00000456246 LNPKQ9C0E8 428 aa21.31■■□□□ 1
MSH6-207ENST00000456246 IVNS1ABPQ9Y6Y0 642 aa21.31■■□□□ 1
MSH6-207ENST00000456246 A0A0G2JMZ2 1700 aa21.31■■□□□ 1
MSH6-207ENST00000456246 RPTORQ8N122 1335 aa21.3■■□□□ 1
MSH6-207ENST00000456246 ZKSCAN1P17029 563 aaPredicted RBP21.3■■□□□ 1
MSH6-207ENST00000456246 DSG3P32926 999 aa21.3■■□□□ 1
MSH6-207ENST00000456246 PDE4BQ07343 736 aa21.3■■□□□ 1
MSH6-207ENST00000456246 ZNF444Q8N0Y2 327 aaPredicted RBP21.3■■□□□ 1
MSH6-207ENST00000456246 EXOC6Q8TAG9 804 aa21.3■■□□□ 1
MSH6-207ENST00000456246 TRIB2Q92519 343 aa21.3■■□□□ 1
MSH6-207ENST00000456246 SEC62Q99442 399 aaKnown RBP21.3■■□□□ 1
MSH6-207ENST00000456246 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.3■■□□□ 14e-8■■□□□ 12.3
MSH6-207ENST00000456246 HMX1Q9NP08 348 aaPredicted RBP21.3■■□□□ 1
MSH6-207ENST00000456246 BTBD7Q9P203 1132 aa21.3■■□□□ 1
MSH6-207ENST00000456246 NYAP2Q9P242 653 aa21.3■■□□□ 1
MSH6-207ENST00000456246 SLC15A5A6NIM6 579 aa21.29■■□□□ 1
MSH6-207ENST00000456246 FLOT1O75955 427 aa21.29■■□□□ 1
MSH6-207ENST00000456246 MAP2K5Q13163 448 aa21.29■■□□□ 1
MSH6-207ENST00000456246 SPICE1Q8N0Z3 855 aa21.29■■□□□ 1
MSH6-207ENST00000456246 SHCBP1Q8NEM2 672 aa21.29■■□□□ 1
MSH6-207ENST00000456246 DEFB118Q96PH6 123 aa21.29■■□□□ 1
MSH6-207ENST00000456246 HELLSQ9NRZ9 838 aa21.29■■□□□ 1
MSH6-207ENST00000456246 SYNPO2Q9UMS6 1093 aa21.29■■□□□ 1
MSH6-207ENST00000456246 RLFQ13129 1914 aa21.29■■□□□ 1
MSH6-207ENST00000456246 PTPREP23469 700 aa21.28■■□□□ 1
MSH6-207ENST00000456246 KIAA1755Q5JYT7 1200 aa21.28■■□□□ 1
MSH6-207ENST00000456246 WDR78Q5VTH9 848 aa21.28■■□□□ 1
MSH6-207ENST00000456246 UBE2Q1Q7Z7E8 422 aa21.28■■□□□ 1
MSH6-207ENST00000456246 CHD1LQ86WJ1 897 aa21.28■■□□□ 1
MSH6-207ENST00000456246 HTATIP2Q9BUP3 242 aa21.28■■□□□ 1
MSH6-207ENST00000456246 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.28■■□□□ 1
MSH6-207ENST00000456246 SPATC1LQ9H0A9 340 aa21.28■■□□□ 1
MSH6-207ENST00000456246 CRISPLD2Q9H0B8 497 aa21.28■■□□□ 1
MSH6-207ENST00000456246 PLIN4Q96Q06 1357 aa21.27■■□□□ 1
MSH6-207ENST00000456246 STRNO43815 780 aa21.27■■□□□ 1
MSH6-207ENST00000456246 FARP2O94887 1054 aaPredicted RBP21.27■■□□□ 1
MSH6-207ENST00000456246 NUCB1Q02818 461 aa21.27■■□□□ 1
MSH6-207ENST00000456246 PPARAQ07869 468 aa21.27■■□□□ 1
MSH6-207ENST00000456246 GRB14Q14449 540 aa21.27■■□□□ 1
MSH6-207ENST00000456246 PPP4R3BQ5MIZ7 849 aa21.27■■□□□ 1
MSH6-207ENST00000456246 MAP3K21Q5TCX8 1036 aa21.27■■□□□ 1
MSH6-207ENST00000456246 TFRCP02786 760 aaKnown RBP21.26■□□□□ 0.99
MSH6-207ENST00000456246 HOXC6P09630 235 aa21.26■□□□□ 0.99
MSH6-207ENST00000456246 STK11IPQ8N1F8 1099 aa21.26■□□□□ 0.99
MSH6-207ENST00000456246 ANKLE1Q8NAG6 615 aa21.26■□□□□ 0.99
MSH6-207ENST00000456246 MOV10L1Q9BXT6 1211 aaKnown RBP21.26■□□□□ 0.99
MSH6-207ENST00000456246 OSBPL3Q9H4L5 887 aa21.26■□□□□ 0.99
MSH6-207ENST00000456246 MROH8Q9H579 483 aa21.26■□□□□ 0.99
MSH6-207ENST00000456246 SUPT16HQ9Y5B9 1047 aaKnown RBP21.26■□□□□ 0.99
MSH6-207ENST00000456246 PARP14Q460N5 1801 aa21.26■□□□□ 0.99
MSH6-207ENST00000456246 ZNF236Q9UL36 1845 aa21.26■□□□□ 0.99
MSH6-207ENST00000456246 IGKV6D-41A0A0C4DH26 115 aa21.25■□□□□ 0.99
MSH6-207ENST00000456246 PRKAR2AP13861 404 aaKnown RBP21.25■□□□□ 0.99
MSH6-207ENST00000456246 B4GALNT3Q6L9W6 998 aa21.25■□□□□ 0.99
MSH6-207ENST00000456246 ATG4CQ96DT6 458 aa21.25■□□□□ 0.99
MSH6-207ENST00000456246 TRIM6-TRIM34B2RNG4 842 aa21.24■□□□□ 0.99
MSH6-207ENST00000456246 RAD21O60216 631 aa21.24■□□□□ 0.99
MSH6-207ENST00000456246 PRDM1O75626 825 aa21.24■□□□□ 0.99
MSH6-207ENST00000456246 SLC25A27O95847 323 aa21.24■□□□□ 0.99
MSH6-207ENST00000456246 IGHDP01880 384 aa21.24■□□□□ 0.99
MSH6-207ENST00000456246 TSPY3P0CV98 308 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms