RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 RPS26P62854 115 aaKnown RBP4.54□□□□□ -1.68
LINC02540-201ENST00000455554 FMR1Q06787 632 aaKnown RBP eCLIP4.54□□□□□ -1.68
LINC02540-201ENST00000455554 PDE4BQ07343 736 aa4.54□□□□□ -1.68
LINC02540-201ENST00000455554 DUSP4Q13115 394 aa4.54□□□□□ -1.68
LINC02540-201ENST00000455554 SEPT6Q14141 434 aa4.54□□□□□ -1.68
LINC02540-201ENST00000455554 PRRT2Q7Z6L0 340 aaPredicted RBP4.54□□□□□ -1.68
LINC02540-201ENST00000455554 MCATQ8IVS2 390 aaKnown RBP4.54□□□□□ -1.68
LINC02540-201ENST00000455554 ANKS4BQ8N8V4 417 aa4.54□□□□□ -1.68
LINC02540-201ENST00000455554 SHISA4Q96DD7 197 aa4.54□□□□□ -1.68
LINC02540-201ENST00000455554 OR14I1A6ND48 311 aa4.53□□□□□ -1.68
LINC02540-201ENST00000455554 OTOL1A6NHN0 477 aaPredicted RBP4.53□□□□□ -1.68
LINC02540-201ENST00000455554 NOTOA8MTQ0 251 aa4.53□□□□□ -1.68
LINC02540-201ENST00000455554 PSPNO60542 156 aa4.53□□□□□ -1.68
LINC02540-201ENST00000455554 VMACQ2NL98 169 aa4.53□□□□□ -1.68
LINC02540-201ENST00000455554 ERICH6BQ5W0A0 696 aa4.53□□□□□ -1.68
LINC02540-201ENST00000455554 PPP1R13LQ8WUF5 828 aa4.53□□□□□ -1.68
LINC02540-201ENST00000455554 SIGLEC10Q96LC7 697 aa4.53□□□□□ -1.68
LINC02540-201ENST00000455554 EPB41L4AQ9HCS5 686 aaPredicted RBP4.53□□□□□ -1.68
LINC02540-201ENST00000455554 ADAM30Q9UKF2 790 aa4.53□□□□□ -1.68
LINC02540-201ENST00000455554 WWC3Q9ULE0 1092 aa4.53□□□□□ -1.68
LINC02540-201ENST00000455554 PCDHB5Q9Y5E4 795 aa4.53□□□□□ -1.68
LINC02540-201ENST00000455554 IRAK3Q9Y616 596 aa4.53□□□□□ -1.68
LINC02540-201ENST00000455554 LRRN2O75325 713 aa4.52□□□□□ -1.69
LINC02540-201ENST00000455554 CELA3BP08861 270 aa4.52□□□□□ -1.69
LINC02540-201ENST00000455554 AFF3P51826 1226 aaKnown RBP4.52□□□□□ -1.69
LINC02540-201ENST00000455554 ATP2B2Q01814 1243 aa4.52□□□□□ -1.69
LINC02540-201ENST00000455554 TEKQ02763 1124 aa4.52□□□□□ -1.69
LINC02540-201ENST00000455554 FEZF2Q8TBJ5 459 aa4.52□□□□□ -1.69
LINC02540-201ENST00000455554 CYB5D2Q8WUJ1 264 aa4.52□□□□□ -1.69
LINC02540-201ENST00000455554 ACSF2Q96CM8 615 aaPredicted RBP4.52□□□□□ -1.69
LINC02540-201ENST00000455554 BORCS6Q96GS4 357 aa4.52□□□□□ -1.69
LINC02540-201ENST00000455554 MBD1Q9UIS9 605 aaPredicted RBP4.52□□□□□ -1.69
LINC02540-201ENST00000455554 HRKO00198 91 aa4.51□□□□□ -1.69
LINC02540-201ENST00000455554 ADRB1P08588 477 aa4.51□□□□□ -1.69
LINC02540-201ENST00000455554 EPHB3P54753 998 aa4.51□□□□□ -1.69
LINC02540-201ENST00000455554 SRSF3P84103 164 aaKnown RBP4.51□□□□□ -1.69
LINC02540-201ENST00000455554 CCDC85BQ15834 202 aaPredicted RBP4.51□□□□□ -1.69
LINC02540-201ENST00000455554 ADGRF1Q5T601 910 aa4.51□□□□□ -1.69
LINC02540-201ENST00000455554 SYT8Q8NBV8 401 aa4.51□□□□□ -1.69
LINC02540-201ENST00000455554 RNF141Q8WVD5 230 aa4.51□□□□□ -1.69
LINC02540-201ENST00000455554 LINC01599Q8WXQ3 324 aa4.51□□□□□ -1.69
LINC02540-201ENST00000455554 DACT3Q96B18 629 aaPredicted RBP4.51□□□□□ -1.69
LINC02540-201ENST00000455554 KRTAP9-8Q9BYQ0 159 aa4.51□□□□□ -1.69
LINC02540-201ENST00000455554 SIRT5Q9NXA8 310 aa4.51□□□□□ -1.69
LINC02540-201ENST00000455554 SLC22A31A6NKX4 558 aa4.5□□□□□ -1.69
LINC02540-201ENST00000455554 PDE4CQ08493 712 aa4.5□□□□□ -1.69
LINC02540-201ENST00000455554 AGMOQ6ZNB7 445 aa4.5□□□□□ -1.69
LINC02540-201ENST00000455554 NLRX1Q86UT6 975 aa4.5□□□□□ -1.69
LINC02540-201ENST00000455554 ZSCAN29Q8IWY8 852 aaPredicted RBP4.5□□□□□ -1.69
LINC02540-201ENST00000455554 SIRT2Q8IXJ6 389 aa4.5□□□□□ -1.69
LINC02540-201ENST00000455554 MIR1-1HGQ9H1L0 117 aa4.5□□□□□ -1.69
LINC02540-201ENST00000455554 GTF3C3Q9Y5Q9 886 aa4.5□□□□□ -1.69
LINC02540-201ENST00000455554 RBM47A0AV96 593 aaKnown RBP4.49□□□□□ -1.69
LINC02540-201ENST00000455554 SHISA3A0PJX4 238 aa4.49□□□□□ -1.69
LINC02540-201ENST00000455554 SDHBP21912 280 aa4.49□□□□□ -1.69
LINC02540-201ENST00000455554 LIG3P49916 1009 aa4.49□□□□□ -1.69
LINC02540-201ENST00000455554 YARSP54577 528 aaKnown RBP4.49□□□□□ -1.69
LINC02540-201ENST00000455554 RPL6Q02878 288 aaKnown RBP4.49□□□□□ -1.69
LINC02540-201ENST00000455554 TSNAXIP1Q2TAA8 658 aa4.49□□□□□ -1.69
LINC02540-201ENST00000455554 SP8Q8IXZ3 490 aa4.49□□□□□ -1.69
LINC02540-201ENST00000455554 ZDHHC14Q8IZN3 488 aa4.49□□□□□ -1.69
LINC02540-201ENST00000455554 FAM13CQ8NE31 585 aa4.49□□□□□ -1.69
LINC02540-201ENST00000455554 FRMD6Q96NE9 622 aa4.49□□□□□ -1.69
LINC02540-201ENST00000455554 G6PC3Q9BUM1 346 aa4.49□□□□□ -1.69
LINC02540-201ENST00000455554 ADAM7Q9H2U9 754 aa4.49□□□□□ -1.69
LINC02540-201ENST00000455554 GNEQ9Y223 722 aaKnown RBP4.49□□□□□ -1.69
LINC02540-201ENST00000455554 ZNF281Q9Y2X9 895 aa4.49□□□□□ -1.69
LINC02540-201ENST00000455554 UPK3BL1B0FP48 263 aa4.48□□□□□ -1.69
LINC02540-201ENST00000455554 UPK3BL2E5RIL1 263 aa4.48□□□□□ -1.69
LINC02540-201ENST00000455554 N4BP3O15049 544 aa4.48□□□□□ -1.69
LINC02540-201ENST00000455554 PLCG1P19174 1290 aa4.48□□□□□ -1.69
LINC02540-201ENST00000455554 MAP3K11Q16584 847 aa4.48□□□□□ -1.69
LINC02540-201ENST00000455554 CLEC16AQ2KHT3 1053 aa4.48□□□□□ -1.69
LINC02540-201ENST00000455554 RETREG2Q8NC44 543 aa4.48□□□□□ -1.69
LINC02540-201ENST00000455554 ASPNQ9BXN1 380 aa4.48□□□□□ -1.69
LINC02540-201ENST00000455554 CNTD2Q9H8S5 307 aa4.48□□□□□ -1.69
LINC02540-201ENST00000455554 CRTAC1Q9NQ79 661 aa4.48□□□□□ -1.69
LINC02540-201ENST00000455554 IRS4O14654 1257 aaPredicted RBP4.47□□□□□ -1.69
LINC02540-201ENST00000455554 USP2O75604 605 aaPredicted RBP4.47□□□□□ -1.69
LINC02540-201ENST00000455554 EIF4BP23588 611 aaKnown RBP4.47□□□□□ -1.69
LINC02540-201ENST00000455554 VIPR1P32241 457 aa4.47□□□□□ -1.69
LINC02540-201ENST00000455554 TNNI2P48788 182 aa4.47□□□□□ -1.69
LINC02540-201ENST00000455554 SLC14A2Q15849 920 aa4.47□□□□□ -1.69
LINC02540-201ENST00000455554 OLFML2BQ68BL8 750 aa4.47□□□□□ -1.69
LINC02540-201ENST00000455554 KREMEN1Q96MU8 473 aa4.47□□□□□ -1.69
LINC02540-201ENST00000455554 TEPSINQ96N21 525 aa4.47□□□□□ -1.69
LINC02540-201ENST00000455554 ASB16Q96NS5 453 aa4.47□□□□□ -1.69
LINC02540-201ENST00000455554 TMPRSS5Q9H3S3 457 aa4.47□□□□□ -1.69
LINC02540-201ENST00000455554 LUC7LQ9NQ29 371 aaKnown RBP4.47□□□□□ -1.69
LINC02540-201ENST00000455554 CORINQ9Y5Q5 1042 aa4.47□□□□□ -1.69
LINC02540-201ENST00000455554 ZC3H12DA2A288 527 aaKnown RBP4.46□□□□□ -1.7
LINC02540-201ENST00000455554 NRDCO43847 1150 aa4.46□□□□□ -1.7
LINC02540-201ENST00000455554 TFE3P19532 575 aaPredicted RBP4.46□□□□□ -1.7
LINC02540-201ENST00000455554 RPL10P27635 214 aaKnown RBP4.46□□□□□ -1.7
LINC02540-201ENST00000455554 YBX1P67809 324 aaKnown RBP4.46□□□□□ -1.7
LINC02540-201ENST00000455554 KIR3DS1Q14943 382 aa4.46□□□□□ -1.7
LINC02540-201ENST00000455554 TMEM201Q5SNT2 666 aa4.46□□□□□ -1.7
LINC02540-201ENST00000455554 DIEXFQ68CQ4 756 aaKnown RBP4.46□□□□□ -1.7
LINC02540-201ENST00000455554 CNKSR3Q6P9H4 555 aa4.46□□□□□ -1.7
LINC02540-201ENST00000455554 RNF111Q6ZNA4 994 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms