RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 PNMA2Q9UL42 364 aa7.88□□□□□ -1.15
ECHDC1-210ENST00000454859 JAG2Q9Y219 1238 aa7.88□□□□□ -1.15
ECHDC1-210ENST00000454859 ATF5Q9Y2D1 282 aaPredicted RBP7.88□□□□□ -1.15
ECHDC1-210ENST00000454859 ADAMTSL1Q8N6G6 1762 aa7.88□□□□□ -1.15
ECHDC1-210ENST00000454859 FIBPO43427 364 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 KRT2P35908 639 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 SEMA3FQ13275 785 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 ANO1Q5XXA6 986 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 RBM43Q6ZSC3 357 aaKnown RBP7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 LINC00301Q8NCQ3 95 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 GMCL1P1Q8NEA9 526 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 CCDC34Q96HJ3 373 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 ZKSCAN3Q9BRR0 538 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 SH2D4AQ9H788 454 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 SENP2Q9HC62 589 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 LAD1O00515 517 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 PLA2G6O60733 806 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 CMA1P23946 247 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 GNA11P29992 359 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 SHMT1P34896 483 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 PTGER2P43116 358 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 EIF6P56537 245 aaKnown RBP7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 PKN1Q16512 942 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 CAVIN1Q6NZI2 390 aaKnown RBP7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 OLFM4Q6UX06 510 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 CCDC73Q6ZRK6 1079 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 KIAA0825Q8IV33 1275 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 NAP1L4Q99733 375 aaKnown RBP7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 MAF1Q9H063 256 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 RIOX1Q9H6W3 641 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 SPON1Q9HCB6 807 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 FAM198AQ9UFP1 575 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 USP25Q9UHP3 1055 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 SAP30BPQ9UHR5 308 aaKnown RBP7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 MAD2L2Q9UI95 211 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 PPP2R3BQ9Y5P8 575 aa7.87□□□□□ -1.15
ECHDC1-210ENST00000454859 FZD9O00144 591 aa7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 PSMD14O00487 310 aa7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 SPTLC2O15270 562 aa7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 CUTAO60888 179 aa7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 PRDM1O75626 825 aa7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 STK38Q15208 465 aa7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 FAM47AQ5JRC9 791 aa7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 FERMT3Q86UX7 667 aa7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 FERMT2Q96AC1 680 aa7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 RRP36Q96EU6 259 aaKnown RBP7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 DYNLL2Q96FJ2 89 aa7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 GMCL1Q96IK5 515 aa7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 CABP5Q9NP86 173 aa7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 DDX4Q9NQI0 724 aaKnown RBP7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 SBF1O95248 1867 aa7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 SLC26A4O43511 780 aa7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 CAPN15O75808 1086 aa7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 ZBTB7AO95365 584 aa7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 DEKP35659 375 aaKnown RBP7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 SCNN1DP51172 638 aa7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 RBM5P52756 815 aaKnown RBP eCLIP7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 FAM160A1Q05DH4 1040 aa7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 SF3A1Q15459 793 aaKnown RBP7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 CERKLQ49MI3 558 aaPredicted RBP7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 FOXD4L5Q5VV16 416 aaPredicted RBP7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 DIS3L2Q8IYB7 885 aaKnown RBP7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 SRBD1Q8N5C6 995 aaKnown RBP7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 NKX2-3Q8TAU0 364 aa7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 FOXD4L4Q8WXT5 416 aaPredicted RBP7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 ANP32BQ92688 251 aaKnown RBP7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 PHKBQ93100 1093 aa7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 CEP95Q96GE4 821 aa7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 USP28Q96RU2 1077 aa7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 CLSTN2Q9H4D0 955 aa7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 BARHL2Q9NY43 387 aa7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 ZNF70Q9UC06 446 aaPredicted RBP7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 SEC63Q9UGP8 760 aaKnown RBP7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 HOOK1Q9UJC3 728 aaKnown RBP7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 V9GY48 417 aaPredicted RBP7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 ZC3H4Q9UPT8 1303 aaKnown RBP7.86□□□□□ -1.15
ECHDC1-210ENST00000454859 HOXA7P31268 230 aaPredicted RBP7.85□□□□□ -1.15
ECHDC1-210ENST00000454859 RBM26Q5T8P6 1007 aaKnown RBP7.85□□□□□ -1.15
ECHDC1-210ENST00000454859 ARL6IP4Q66PJ3 421 aaKnown RBP7.85□□□□□ -1.15
ECHDC1-210ENST00000454859 KANK3Q6NY19 840 aa7.85□□□□□ -1.15
ECHDC1-210ENST00000454859 MRPS27Q92552 414 aaKnown RBP7.85□□□□□ -1.15
ECHDC1-210ENST00000454859 PDGFDQ9GZP0 370 aaPredicted RBP7.85□□□□□ -1.15
ECHDC1-210ENST00000454859 ZMYND12Q9H0C1 365 aa7.85□□□□□ -1.15
ECHDC1-210ENST00000454859 NUP62CLQ9H1M0 184 aa7.85□□□□□ -1.15
ECHDC1-210ENST00000454859 ZNF277Q9NRM2 450 aaPredicted RBP7.85□□□□□ -1.15
ECHDC1-210ENST00000454859 TMEM63CQ9P1W3 806 aa7.85□□□□□ -1.15
ECHDC1-210ENST00000454859 PCDHA4Q9UN74 947 aa7.85□□□□□ -1.15
ECHDC1-210ENST00000454859 STX8Q9UNK0 236 aa7.85□□□□□ -1.15
ECHDC1-210ENST00000454859 KLRF2D3W0D1 207 aa7.85□□□□□ -1.15
ECHDC1-210ENST00000454859 F8W031 263 aaPredicted RBP7.85□□□□□ -1.15
ECHDC1-210ENST00000454859 CCDC192P0DO97 292 aa7.85□□□□□ -1.15
ECHDC1-210ENST00000454859 PDHBP11177 359 aa7.85□□□□□ -1.15
ECHDC1-210ENST00000454859 CXCL9Q07325 125 aa7.85□□□□□ -1.15
ECHDC1-210ENST00000454859 PICALMQ13492 652 aa7.85□□□□□ -1.15
ECHDC1-210ENST00000454859 R3HDM1Q15032 1099 aaKnown RBP7.85□□□□□ -1.15
ECHDC1-210ENST00000454859 MAP3K11Q16584 847 aa7.85□□□□□ -1.15
ECHDC1-210ENST00000454859 SAMD1Q6SPF0 538 aaPredicted RBP7.85□□□□□ -1.15
ECHDC1-210ENST00000454859 KRT25Q7Z3Z0 450 aa7.85□□□□□ -1.15
ECHDC1-210ENST00000454859 SLC51AQ86UW1 340 aa7.85□□□□□ -1.15
ECHDC1-210ENST00000454859 SAMD3Q8N6K7 520 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms