RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 RASSF4Q9H2L5 321 aa12.63□□□□□ -0.39
DDR1-240ENST00000454612 GPR108Q9NPR9 543 aa12.63□□□□□ -0.39
DDR1-240ENST00000454612 TEX33O43247 280 aa12.63□□□□□ -0.39
DDR1-240ENST00000454612 LMAN1P49257 510 aa12.63□□□□□ -0.39
DDR1-240ENST00000454612 ARMCX5Q6P1M9 558 aa12.63□□□□□ -0.39
DDR1-240ENST00000454612 ZSCAN10Q96SZ4 725 aaPredicted RBP12.63□□□□□ -0.39
DDR1-240ENST00000454612 SLIT2O94813 1529 aa12.63□□□□□ -0.39
DDR1-240ENST00000454612 C5P01031 1676 aa12.63□□□□□ -0.39
DDR1-240ENST00000454612 FRMPD2Q68DX3 1309 aaPredicted RBP12.63□□□□□ -0.39
DDR1-240ENST00000454612 PARP4Q9UKK3 1724 aaKnown RBP12.62□□□□□ -0.39
DDR1-240ENST00000454612 TSGA10IPQ3SY00 556 aa12.62□□□□□ -0.39
DDR1-240ENST00000454612 CRACR2BQ8N4Y2 399 aaPredicted RBP12.62□□□□□ -0.39
DDR1-240ENST00000454612 SPTLC3Q9NUV7 552 aa12.62□□□□□ -0.39
DDR1-240ENST00000454612 MROH5Q6ZUA9 1318 aa12.62□□□□□ -0.39
DDR1-240ENST00000454612 SOWAHDA6NJG2 315 aa12.62□□□□□ -0.39
DDR1-240ENST00000454612 ENC1O14682 589 aa12.62□□□□□ -0.39
DDR1-240ENST00000454612 CCP110O43303 1012 aa12.62□□□□□ -0.39
DDR1-240ENST00000454612 DNAJC21Q5F1R6 531 aaKnown RBP12.62□□□□□ -0.39
DDR1-240ENST00000454612 ZNF772Q68DY9 489 aaPredicted RBP12.62□□□□□ -0.39
DDR1-240ENST00000454612 BIN2Q9UBW5 565 aaPredicted RBP12.62□□□□□ -0.39
DDR1-240ENST00000454612 CCNL1Q9UK58 526 aaPredicted RBP12.62□□□□□ -0.39
DDR1-240ENST00000454612 MAN1B1Q9UKM7 699 aa12.62□□□□□ -0.39
DDR1-240ENST00000454612 ZMYND10O75800 440 aa12.62□□□□□ -0.39
DDR1-240ENST00000454612 KRT9P35527 623 aa12.62□□□□□ -0.39
DDR1-240ENST00000454612 ANKRD13CQ8N6S4 541 aa12.62□□□□□ -0.39
DDR1-240ENST00000454612 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.62□□□□□ -0.39
DDR1-240ENST00000454612 TCP11L1Q9NUJ3 509 aa12.62□□□□□ -0.39
DDR1-240ENST00000454612 SEPT11Q9NVA2 429 aaKnown RBP12.62□□□□□ -0.39
DDR1-240ENST00000454612 RTCBQ9Y3I0 505 aaKnown RBP12.62□□□□□ -0.39
DDR1-240ENST00000454612 PLCH1Q4KWH8 1693 aa12.62□□□□□ -0.39
DDR1-240ENST00000454612 TNS2Q63HR2 1409 aa12.61□□□□□ -0.39
DDR1-240ENST00000454612 UFL1O94874 794 aa12.61□□□□□ -0.39
DDR1-240ENST00000454612 SCNN1DP51172 638 aa12.61□□□□□ -0.39
DDR1-240ENST00000454612 NKX1-1Q15270 411 aaPredicted RBP12.61□□□□□ -0.39
DDR1-240ENST00000454612 ZCCHC17Q9NP64 241 aaKnown RBP12.61□□□□□ -0.39
DDR1-240ENST00000454612 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.61□□□□□ -0.398e-8■■■■□ 25.6
DDR1-240ENST00000454612 AKR1B15C9JRZ8 316 aaPredicted RBP12.61□□□□□ -0.39
DDR1-240ENST00000454612 CCNT1O60563 726 aaKnown RBP12.61□□□□□ -0.39
DDR1-240ENST00000454612 KIF5BP33176 963 aa12.61□□□□□ -0.39
DDR1-240ENST00000454612 TCERG1LQ5VWI1 586 aa12.61□□□□□ -0.39
DDR1-240ENST00000454612 FBXO38Q6PIJ6 1188 aa12.61□□□□□ -0.39
DDR1-240ENST00000454612 BCL9LQ86UU0 1499 aa12.61□□□□□ -0.39
DDR1-240ENST00000454612 ATL3Q6DD88 541 aa12.61□□□□□ -0.39
DDR1-240ENST00000454612 DTHD1Q6ZMT9 781 aa12.61□□□□□ -0.39
DDR1-240ENST00000454612 IQUBQ8NA54 791 aa12.61□□□□□ -0.39
DDR1-240ENST00000454612 ZNF397Q8NF99 534 aaPredicted RBP12.61□□□□□ -0.39
DDR1-240ENST00000454612 SLC4A9Q96Q91 983 aa12.61□□□□□ -0.39
DDR1-240ENST00000454612 CASP14P31944 242 aa12.6□□□□□ -0.39
DDR1-240ENST00000454612 GABPB1Q06547 395 aaPredicted RBP12.6□□□□□ -0.39
DDR1-240ENST00000454612 METTL16Q86W50 562 aaKnown RBP12.6□□□□□ -0.39
DDR1-240ENST00000454612 LRRC47Q8N1G4 583 aaKnown RBP12.6□□□□□ -0.39
DDR1-240ENST00000454612 LRRN4CLQ8ND94 238 aa12.6□□□□□ -0.39
DDR1-240ENST00000454612 ACRBPQ8NEB7 543 aa12.6□□□□□ -0.39
DDR1-240ENST00000454612 PPP2R2CQ9Y2T4 447 aa12.6□□□□□ -0.39
DDR1-240ENST00000454612 SYNRGQ9UMZ2 1314 aa12.6□□□□□ -0.39
DDR1-240ENST00000454612 A0A1W2PQ27 194 aa12.6□□□□□ -0.39
DDR1-240ENST00000454612 A0A1W2PQ64 194 aa12.6□□□□□ -0.39
DDR1-240ENST00000454612 A0A1W2PQD8 194 aa12.6□□□□□ -0.39
DDR1-240ENST00000454612 CCDC175P0C221 793 aa12.6□□□□□ -0.39
DDR1-240ENST00000454612 GNAT2P19087 354 aa12.6□□□□□ -0.39
DDR1-240ENST00000454612 FMR1Q06787 632 aaKnown RBP eCLIP12.6□□□□□ -0.393e-7■■■□□ 15.5
DDR1-240ENST00000454612 CACNA2D4Q7Z3S7 1137 aa12.6□□□□□ -0.39
DDR1-240ENST00000454612 CLEC10AQ8IUN9 316 aa12.6□□□□□ -0.39
DDR1-240ENST00000454612 TEX11Q8IYF3 940 aa12.6□□□□□ -0.39
DDR1-240ENST00000454612 KIF2AO00139 706 aaPredicted RBP12.6□□□□□ -0.39
DDR1-240ENST00000454612 MMP1P03956 469 aa12.6□□□□□ -0.39
DDR1-240ENST00000454612 RDXP35241 583 aaKnown RBP12.6□□□□□ -0.39
DDR1-240ENST00000454612 IRX5P78411 483 aaPredicted RBP12.6□□□□□ -0.39
DDR1-240ENST00000454612 ANKRD7Q92527 254 aa12.6□□□□□ -0.39
DDR1-240ENST00000454612 ALDH8A1Q9H2A2 487 aaPredicted RBP12.6□□□□□ -0.39
DDR1-240ENST00000454612 GDAQ9Y2T3 454 aa12.6□□□□□ -0.39
DDR1-240ENST00000454612 SIPA1L3O60292 1781 aaPredicted RBP12.6□□□□□ -0.39
DDR1-240ENST00000454612 BAG3O95817 575 aa12.59□□□□□ -0.39
DDR1-240ENST00000454612 IL6STP40189 918 aaPredicted RBP12.59□□□□□ -0.39
DDR1-240ENST00000454612 ETF1P62495 437 aaKnown RBP12.59□□□□□ -0.39
DDR1-240ENST00000454612 CACNB1Q02641 598 aaPredicted RBP12.59□□□□□ -0.39
DDR1-240ENST00000454612 PPP2R3AQ06190 1150 aa12.59□□□□□ -0.39
DDR1-240ENST00000454612 SPECC1LQ69YQ0 1117 aa12.59□□□□□ -0.39
DDR1-240ENST00000454612 USP17L2Q6R6M4 530 aa12.59□□□□□ -0.39
DDR1-240ENST00000454612 TOGARAM2Q6ZUX3 1019 aa12.59□□□□□ -0.39
DDR1-240ENST00000454612 RASGRP2Q7LDG7 609 aa12.59□□□□□ -0.39
DDR1-240ENST00000454612 PNMA1Q8ND90 353 aa12.59□□□□□ -0.39
DDR1-240ENST00000454612 ENGASEQ8NFI3 743 aa12.59□□□□□ -0.39
DDR1-240ENST00000454612 IGDCC4Q8TDY8 1250 aa12.59□□□□□ -0.39
DDR1-240ENST00000454612 TFR2Q9UP52 801 aa12.59□□□□□ -0.39
DDR1-240ENST00000454612 TRIM49BA6NDI0 452 aa12.59□□□□□ -0.39
DDR1-240ENST00000454612 TECP42680 631 aa12.59□□□□□ -0.39
DDR1-240ENST00000454612 MECOMQ03112 1051 aa12.59□□□□□ -0.39
DDR1-240ENST00000454612 BMS1Q14692 1282 aaKnown RBP12.59□□□□□ -0.39
DDR1-240ENST00000454612 WWC2Q6AWC2 1192 aa12.59□□□□□ -0.39
DDR1-240ENST00000454612 ENAHQ8N8S7 591 aaPredicted RBP12.59□□□□□ -0.39
DDR1-240ENST00000454612 ERO1AQ96HE7 468 aa12.59□□□□□ -0.39
DDR1-240ENST00000454612 SRRTQ9BXP5 876 aaKnown RBP12.59□□□□□ -0.39
DDR1-240ENST00000454612 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.59□□□□□ -0.39
DDR1-240ENST00000454612 TFRCP02786 760 aaKnown RBP12.59□□□□□ -0.39
DDR1-240ENST00000454612 VEGFAP15692 232 aaPredicted RBP12.59□□□□□ -0.39
DDR1-240ENST00000454612 ARID4AP29374 1257 aaPredicted RBP12.59□□□□□ -0.39
DDR1-240ENST00000454612 SF3A3Q12874 501 aaKnown RBP eCLIP12.59□□□□□ -0.399e-7■■■■□ 24.7
DDR1-240ENST00000454612 DOK7Q18PE1 504 aa12.59□□□□□ -0.39
DDR1-240ENST00000454612 CCDC181Q5TID7 509 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms