RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 COG2Q14746 738 aa12.88□□□□□ -0.35
LMCD1-205ENST00000454244 WDR78Q5VTH9 848 aa12.88□□□□□ -0.35
LMCD1-205ENST00000454244 LBX2Q6XYB7 198 aa12.88□□□□□ -0.35
LMCD1-205ENST00000454244 PLEKHH3Q7Z736 793 aa12.88□□□□□ -0.35
LMCD1-205ENST00000454244 SPICE1Q8N0Z3 855 aa12.88□□□□□ -0.35
LMCD1-205ENST00000454244 LNPKQ9C0E8 428 aa12.88□□□□□ -0.35
LMCD1-205ENST00000454244 RWDD1Q9H446 243 aaPredicted RBP12.88□□□□□ -0.35
LMCD1-205ENST00000454244 VCPKMTQ9H867 229 aa12.88□□□□□ -0.35
LMCD1-205ENST00000454244 KANSL2Q9H9L4 492 aa12.88□□□□□ -0.35
LMCD1-205ENST00000454244 MKNK2Q9HBH9 465 aa12.88□□□□□ -0.35
LMCD1-205ENST00000454244 BTBD7Q9P203 1132 aa12.88□□□□□ -0.35
LMCD1-205ENST00000454244 STAP2Q9UGK3 403 aa12.88□□□□□ -0.35
LMCD1-205ENST00000454244 RBBP6Q7Z6E9 1792 aaKnown RBP12.88□□□□□ -0.35
LMCD1-205ENST00000454244 MGAMO43451 1857 aa12.88□□□□□ -0.35
LMCD1-205ENST00000454244 SGPL1O95470 568 aa12.87□□□□□ -0.35
LMCD1-205ENST00000454244 TRIM32Q13049 653 aa12.87□□□□□ -0.35
LMCD1-205ENST00000454244 MORN1Q5T089 497 aa12.87□□□□□ -0.35
LMCD1-205ENST00000454244 IFNL3Q8IZI9 196 aa12.87□□□□□ -0.35
LMCD1-205ENST00000454244 TRIB2Q92519 343 aa12.87□□□□□ -0.35
LMCD1-205ENST00000454244 LPAR1Q92633 364 aa12.87□□□□□ -0.35
LMCD1-205ENST00000454244 EVI5LQ96CN4 794 aa12.87□□□□□ -0.35
LMCD1-205ENST00000454244 DEFB118Q96PH6 123 aa12.87□□□□□ -0.35
LMCD1-205ENST00000454244 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.87□□□□□ -0.35
LMCD1-205ENST00000454244 NACAP1Q9BZK3 213 aa12.87□□□□□ -0.35
LMCD1-205ENST00000454244 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.87□□□□□ -0.35
LMCD1-205ENST00000454244 HOXC10Q9NYD6 342 aa12.87□□□□□ -0.35
LMCD1-205ENST00000454244 BAZ2AQ9UIF9 1905 aaKnown RBP12.86□□□□□ -0.35
LMCD1-205ENST00000454244 ROBO3Q96MS0 1386 aa12.86□□□□□ -0.35
LMCD1-205ENST00000454244 WDR46O15213 610 aaKnown RBP12.86□□□□□ -0.35
LMCD1-205ENST00000454244 XRCC5P13010 732 aaKnown RBP12.86□□□□□ -0.35
LMCD1-205ENST00000454244 DSG3P32926 999 aa12.86□□□□□ -0.35
LMCD1-205ENST00000454244 RGS2P41220 211 aa12.86□□□□□ -0.35
LMCD1-205ENST00000454244 B4GALNT3Q6L9W6 998 aa12.86□□□□□ -0.35
LMCD1-205ENST00000454244 SAMD1Q6SPF0 538 aaPredicted RBP12.86□□□□□ -0.35
LMCD1-205ENST00000454244 CCDC129Q6ZRS4 1044 aa12.86□□□□□ -0.35
LMCD1-205ENST00000454244 SMC5Q8IY18 1101 aa12.86□□□□□ -0.35
LMCD1-205ENST00000454244 USP6NLQ92738 828 aa12.86□□□□□ -0.35
LMCD1-205ENST00000454244 PAK6Q9NQU5 681 aaPredicted RBP12.86□□□□□ -0.35
LMCD1-205ENST00000454244 MYH7P12883 1935 aa12.86□□□□□ -0.35
LMCD1-205ENST00000454244 RAD21O60216 631 aa12.85□□□□□ -0.35
LMCD1-205ENST00000454244 PRDM1O75626 825 aa12.85□□□□□ -0.35
LMCD1-205ENST00000454244 FLOT1O75955 427 aa12.85□□□□□ -0.35
LMCD1-205ENST00000454244 FARP2O94887 1054 aaPredicted RBP12.85□□□□□ -0.35
LMCD1-205ENST00000454244 IGHDP01880 384 aa12.85□□□□□ -0.35
LMCD1-205ENST00000454244 TFRCP02786 760 aaKnown RBP12.85□□□□□ -0.35
LMCD1-205ENST00000454244 ZKSCAN1P17029 563 aaPredicted RBP12.85□□□□□ -0.35
LMCD1-205ENST00000454244 PTPREP23469 700 aa12.85□□□□□ -0.35
LMCD1-205ENST00000454244 MAP2K5Q13163 448 aa12.85□□□□□ -0.35
LMCD1-205ENST00000454244 ZNF444Q8N0Y2 327 aaPredicted RBP12.85□□□□□ -0.35
LMCD1-205ENST00000454244 ATG4CQ96DT6 458 aa12.85□□□□□ -0.35
LMCD1-205ENST00000454244 APBA2Q99767 749 aa12.85□□□□□ -0.35
LMCD1-205ENST00000454244 MOV10L1Q9BXT6 1211 aaKnown RBP12.85□□□□□ -0.35
LMCD1-205ENST00000454244 NAPBQ9H115 298 aa12.85□□□□□ -0.35
LMCD1-205ENST00000454244 GOPCQ9HD26 462 aa12.85□□□□□ -0.35
LMCD1-205ENST00000454244 HMX1Q9NP08 348 aaPredicted RBP12.85□□□□□ -0.35
LMCD1-205ENST00000454244 SUPT16HQ9Y5B9 1047 aaKnown RBP12.85□□□□□ -0.35
LMCD1-205ENST00000454244 RPTORQ8N122 1335 aa12.85□□□□□ -0.35
LMCD1-205ENST00000454244 DOCK3Q8IZD9 2030 aa12.84□□□□□ -0.35
LMCD1-205ENST00000454244 SLC15A5A6NIM6 579 aa12.84□□□□□ -0.35
LMCD1-205ENST00000454244 PRKAR2AP13861 404 aaKnown RBP12.84□□□□□ -0.35
LMCD1-205ENST00000454244 PPARAQ07869 468 aa12.84□□□□□ -0.35
LMCD1-205ENST00000454244 CCL14Q16627 93 aa12.84□□□□□ -0.35
LMCD1-205ENST00000454244 UBE2Q1Q7Z7E8 422 aa12.84□□□□□ -0.35
LMCD1-205ENST00000454244 TRMT44Q8IYL2 757 aaKnown RBP12.84□□□□□ -0.35
LMCD1-205ENST00000454244 MB21D1Q8N884 522 aa12.84□□□□□ -0.35
LMCD1-205ENST00000454244 SPATC1LQ9H0A9 340 aa12.84□□□□□ -0.35
LMCD1-205ENST00000454244 ZNF287Q9HBT7 754 aa12.84□□□□□ -0.35
LMCD1-205ENST00000454244 NYAP2Q9P242 653 aa12.84□□□□□ -0.35
LMCD1-205ENST00000454244 IVNS1ABPQ9Y6Y0 642 aa12.84□□□□□ -0.35
LMCD1-205ENST00000454244 IGKV6D-41A0A0C4DH26 115 aa12.83□□□□□ -0.36
LMCD1-205ENST00000454244 FOXP2O15409 715 aa12.83□□□□□ -0.36
LMCD1-205ENST00000454244 PDE4BQ07343 736 aa12.83□□□□□ -0.36
LMCD1-205ENST00000454244 PLS1Q14651 629 aa12.83□□□□□ -0.36
LMCD1-205ENST00000454244 FAM83BQ5T0W9 1011 aa12.83□□□□□ -0.36
LMCD1-205ENST00000454244 MAP3K21Q5TCX8 1036 aa12.83□□□□□ -0.36
LMCD1-205ENST00000454244 CHD1LQ86WJ1 897 aa12.83□□□□□ -0.36
LMCD1-205ENST00000454244 CRISPLD2Q9H0B8 497 aa12.83□□□□□ -0.36
LMCD1-205ENST00000454244 FBXO28Q9NVF7 368 aa12.83□□□□□ -0.36
LMCD1-205ENST00000454244 TRIM6-TRIM34B2RNG4 842 aa12.82□□□□□ -0.36
LMCD1-205ENST00000454244 SLC3A2P08195 630 aaKnown RBP12.82□□□□□ -0.36
LMCD1-205ENST00000454244 CAPN2P17655 700 aa12.82□□□□□ -0.36
LMCD1-205ENST00000454244 ERCC3P19447 782 aa12.82□□□□□ -0.36
LMCD1-205ENST00000454244 NUCB1Q02818 461 aa12.82□□□□□ -0.36
LMCD1-205ENST00000454244 CACNB2Q08289 660 aaPredicted RBP12.82□□□□□ -0.36
LMCD1-205ENST00000454244 GRB14Q14449 540 aa12.82□□□□□ -0.36
LMCD1-205ENST00000454244 VPS53Q5VIR6 699 aa12.82□□□□□ -0.36
LMCD1-205ENST00000454244 SHCBP1Q8NEM2 672 aa12.82□□□□□ -0.36
LMCD1-205ENST00000454244 NPLOC4Q8TAT6 608 aa12.82□□□□□ -0.36
LMCD1-205ENST00000454244 DPF3Q92784 378 aa12.82□□□□□ -0.36
LMCD1-205ENST00000454244 CEP95Q96GE4 821 aa12.82□□□□□ -0.36
LMCD1-205ENST00000454244 FAM227BQ96M60 508 aa12.82□□□□□ -0.36
LMCD1-205ENST00000454244 NUP88Q99567 741 aaPredicted RBP12.82□□□□□ -0.36
LMCD1-205ENST00000454244 HTATIP2Q9BUP3 242 aa12.82□□□□□ -0.36
LMCD1-205ENST00000454244 HELLSQ9NRZ9 838 aa12.82□□□□□ -0.36
LMCD1-205ENST00000454244 CLIP2Q9UDT6 1046 aa12.82□□□□□ -0.36
LMCD1-205ENST00000454244 A0A0D9SFI3 127 aa12.81□□□□□ -0.36
LMCD1-205ENST00000454244 F5H6K3 240 aa12.81□□□□□ -0.36
LMCD1-205ENST00000454244 NDUFB10O96000 172 aa12.81□□□□□ -0.36
LMCD1-205ENST00000454244 HOXC6P09630 235 aa12.81□□□□□ -0.36
LMCD1-205ENST00000454244 TSPY3P0CV98 308 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms