RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 ZMYM1Q5SVZ6 1142 aa12.76□□□□□ -0.37
DDX39A-203ENST00000454233 WDR78Q5VTH9 848 aa12.76□□□□□ -0.37
DDX39A-203ENST00000454233 PLEKHH3Q7Z736 793 aa12.76□□□□□ -0.37
DDX39A-203ENST00000454233 CLEC10AQ8IUN9 316 aa12.76□□□□□ -0.37
DDX39A-203ENST00000454233 STK11IPQ8N1F8 1099 aa12.76□□□□□ -0.37
DDX39A-203ENST00000454233 EXOC6Q8TAG9 804 aa12.76□□□□□ -0.37
DDX39A-203ENST00000454233 SEC62Q99442 399 aaKnown RBP12.76□□□□□ -0.37
DDX39A-203ENST00000454233 LNPKQ9C0E8 428 aa12.76□□□□□ -0.37
DDX39A-203ENST00000454233 PORCNQ9H237 461 aa12.76□□□□□ -0.37
DDX39A-203ENST00000454233 VCPKMTQ9H867 229 aa12.76□□□□□ -0.37
DDX39A-203ENST00000454233 EPB41L4AQ9HCS5 686 aaPredicted RBP12.76□□□□□ -0.37
DDX39A-203ENST00000454233 SPDYE16A6NNV3 312 aaPredicted RBP12.75□□□□□ -0.37
DDX39A-203ENST00000454233 CNMDO75829 334 aa12.75□□□□□ -0.37
DDX39A-203ENST00000454233 SLC3A2P08195 630 aaKnown RBP12.75□□□□□ -0.37
DDX39A-203ENST00000454233 EEF2P13639 858 aaKnown RBP12.75□□□□□ -0.37
DDX39A-203ENST00000454233 CAPN2P17655 700 aa12.75□□□□□ -0.37
DDX39A-203ENST00000454233 RASA1P20936 1047 aa12.75□□□□□ -0.37
DDX39A-203ENST00000454233 B4GALNT3Q6L9W6 998 aa12.75□□□□□ -0.37
DDX39A-203ENST00000454233 GPR142Q7Z601 462 aa12.75□□□□□ -0.37
DDX39A-203ENST00000454233 SIAH1Q8IUQ4 282 aa12.75□□□□□ -0.37
DDX39A-203ENST00000454233 SMC5Q8IY18 1101 aa12.75□□□□□ -0.37
DDX39A-203ENST00000454233 TRMT44Q8IYL2 757 aaKnown RBP12.75□□□□□ -0.37
DDX39A-203ENST00000454233 IFNL3Q8IZI9 196 aa12.75□□□□□ -0.37
DDX39A-203ENST00000454233 ZNF444Q8N0Y2 327 aaPredicted RBP12.75□□□□□ -0.37
DDX39A-203ENST00000454233 SPICE1Q8N0Z3 855 aa12.75□□□□□ -0.37
DDX39A-203ENST00000454233 U2AF1L4Q8WU68 220 aaKnown RBP12.75□□□□□ -0.37
DDX39A-203ENST00000454233 ROBO3Q96MS0 1386 aa12.75□□□□□ -0.37
DDX39A-203ENST00000454233 NAPBQ9H115 298 aa12.75□□□□□ -0.37
DDX39A-203ENST00000454233 GOPCQ9HD26 462 aa12.75□□□□□ -0.37
DDX39A-203ENST00000454233 SUPT16HQ9Y5B9 1047 aaKnown RBP12.75□□□□□ -0.37
DDX39A-203ENST00000454233 IVNS1ABPQ9Y6Y0 642 aa12.75□□□□□ -0.37
DDX39A-203ENST00000454233 WDR46O15213 610 aaKnown RBP12.74□□□□□ -0.37
DDX39A-203ENST00000454233 RAD21O60216 631 aa12.74□□□□□ -0.37
DDX39A-203ENST00000454233 FLOT1O75955 427 aa12.74□□□□□ -0.37
DDX39A-203ENST00000454233 SGPL1O95470 568 aa12.74□□□□□ -0.37
DDX39A-203ENST00000454233 XRCC5P13010 732 aaKnown RBP12.74□□□□□ -0.37
DDX39A-203ENST00000454233 RGS2P41220 211 aa12.74□□□□□ -0.37
DDX39A-203ENST00000454233 KIAA1755Q5JYT7 1200 aa12.74□□□□□ -0.37
DDX39A-203ENST00000454233 POTEEQ6S8J3 1075 aa12.74□□□□□ -0.37
DDX39A-203ENST00000454233 MB21D1Q8N884 522 aa12.74□□□□□ -0.37
DDX39A-203ENST00000454233 SHISA4Q96DD7 197 aa12.74□□□□□ -0.37
DDX39A-203ENST00000454233 BTBD7Q9P203 1132 aa12.74□□□□□ -0.37
DDX39A-203ENST00000454233 TNRC18O15417 2968 aaPredicted RBP12.74□□□□□ -0.37
DDX39A-203ENST00000454233 RPTORQ8N122 1335 aa12.73□□□□□ -0.37
DDX39A-203ENST00000454233 SLC15A5A6NIM6 579 aa12.73□□□□□ -0.37
DDX39A-203ENST00000454233 TRIM6-TRIM34B2RNG4 842 aa12.73□□□□□ -0.37
DDX39A-203ENST00000454233 TFRCP02786 760 aaKnown RBP12.73□□□□□ -0.37
DDX39A-203ENST00000454233 ZKSCAN1P17029 563 aaPredicted RBP12.73□□□□□ -0.37
DDX39A-203ENST00000454233 DSG3P32926 999 aa12.73□□□□□ -0.37
DDX39A-203ENST00000454233 PDE4BQ07343 736 aa12.73□□□□□ -0.37
DDX39A-203ENST00000454233 MORN1Q5T089 497 aa12.73□□□□□ -0.37
DDX39A-203ENST00000454233 SAMD1Q6SPF0 538 aaPredicted RBP12.73□□□□□ -0.37
DDX39A-203ENST00000454233 CHD1LQ86WJ1 897 aa12.73□□□□□ -0.37
DDX39A-203ENST00000454233 TICAM2Q86XR7 235 aa12.73□□□□□ -0.37
DDX39A-203ENST00000454233 TRIB2Q92519 343 aa12.73□□□□□ -0.37
DDX39A-203ENST00000454233 DEFB118Q96PH6 123 aa12.73□□□□□ -0.37
DDX39A-203ENST00000454233 APBA2Q99767 749 aa12.73□□□□□ -0.37
DDX39A-203ENST00000454233 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.73□□□□□ -0.377e-7■■■□□ 16.6
DDX39A-203ENST00000454233 HMX1Q9NP08 348 aaPredicted RBP12.73□□□□□ -0.37
DDX39A-203ENST00000454233 PAK6Q9NQU5 681 aaPredicted RBP12.73□□□□□ -0.37
DDX39A-203ENST00000454233 NYAP2Q9P242 653 aa12.73□□□□□ -0.37
DDX39A-203ENST00000454233 PRDM1O75626 825 aa12.72□□□□□ -0.37
DDX39A-203ENST00000454233 FARP2O94887 1054 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-203ENST00000454233 IGHDP01880 384 aa12.72□□□□□ -0.37
DDX39A-203ENST00000454233 PTPREP23469 700 aa12.72□□□□□ -0.37
DDX39A-203ENST00000454233 PPARAQ07869 468 aa12.72□□□□□ -0.37
DDX39A-203ENST00000454233 MAP2K5Q13163 448 aa12.72□□□□□ -0.37
DDX39A-203ENST00000454233 CCDC129Q6ZRS4 1044 aa12.72□□□□□ -0.37
DDX39A-203ENST00000454233 USP6NLQ92738 828 aa12.72□□□□□ -0.37
DDX39A-203ENST00000454233 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.72□□□□□ -0.37
DDX39A-203ENST00000454233 SPATC1LQ9H0A9 340 aa12.72□□□□□ -0.37
DDX39A-203ENST00000454233 HELLSQ9NRZ9 838 aa12.72□□□□□ -0.37
DDX39A-203ENST00000454233 PLXNB2O15031 1838 aa12.72□□□□□ -0.37
DDX39A-203ENST00000454233 PRKAR2AP13861 404 aaKnown RBP12.71□□□□□ -0.37
DDX39A-203ENST00000454233 NUCB1Q02818 461 aa12.71□□□□□ -0.37
DDX39A-203ENST00000454233 TRIM32Q13049 653 aa12.71□□□□□ -0.37
DDX39A-203ENST00000454233 PLS1Q14651 629 aa12.71□□□□□ -0.37
DDX39A-203ENST00000454233 SHCBP1Q8NEM2 672 aa12.71□□□□□ -0.37
DDX39A-203ENST00000454233 RILPL2Q969X0 211 aa12.71□□□□□ -0.37
DDX39A-203ENST00000454233 ATG4CQ96DT6 458 aa12.71□□□□□ -0.37
DDX39A-203ENST00000454233 HTATIP2Q9BUP3 242 aa12.71□□□□□ -0.37
DDX39A-203ENST00000454233 MOV10L1Q9BXT6 1211 aaKnown RBP12.71□□□□□ -0.37
DDX39A-203ENST00000454233 CLIP2Q9UDT6 1046 aa12.71□□□□□ -0.37
DDX39A-203ENST00000454233 CENPFP49454 3210 aa12.71□□□□□ -0.38
DDX39A-203ENST00000454233 STRNO43815 780 aa12.7□□□□□ -0.38
DDX39A-203ENST00000454233 TSPY3P0CV98 308 aa12.7□□□□□ -0.38
DDX39A-203ENST00000454233 TSPY8P0CW00 308 aa12.7□□□□□ -0.38
DDX39A-203ENST00000454233 GRB14Q14449 540 aa12.7□□□□□ -0.38
DDX39A-203ENST00000454233 MCMDC2Q4G0Z9 681 aa12.7□□□□□ -0.38
DDX39A-203ENST00000454233 FAM83BQ5T0W9 1011 aa12.7□□□□□ -0.38
DDX39A-203ENST00000454233 MFSD14CQ5VZR4 134 aa12.7□□□□□ -0.38
DDX39A-203ENST00000454233 DPF3Q92784 378 aa12.7□□□□□ -0.38
DDX39A-203ENST00000454233 MROH8Q9H579 483 aa12.7□□□□□ -0.38
DDX39A-203ENST00000454233 GREB1LQ9C091 1923 aaPredicted RBP12.69□□□□□ -0.38
DDX39A-203ENST00000454233 IGKV6D-41A0A0C4DH26 115 aa12.69□□□□□ -0.38
DDX39A-203ENST00000454233 F5H6K3 240 aa12.69□□□□□ -0.38
DDX39A-203ENST00000454233 SLC25A27O95847 323 aa12.69□□□□□ -0.38
DDX39A-203ENST00000454233 TTLL1O95922 423 aa12.69□□□□□ -0.38
DDX39A-203ENST00000454233 ERCC3P19447 782 aa12.69□□□□□ -0.38
DDX39A-203ENST00000454233 TFAP4Q01664 338 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms