RNA–Protein interactions for RNA: ENST00000453727.6

LMO3-210, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 2,403 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-210ENST00000453727 TXLNBQ8N3L3 684 aa9.81□□□□□ -0.84
LMO3-210ENST00000453727 ENAHQ8N8S7 591 aaPredicted RBP9.81□□□□□ -0.84
LMO3-210ENST00000453727 TDRD3Q9H7E2 651 aaKnown RBP9.81□□□□□ -0.84
LMO3-210ENST00000453727 GJA3Q9Y6H8 435 aa9.81□□□□□ -0.84
LMO3-210ENST00000453727 SPDYE2BA6NHP3 402 aa9.8□□□□□ -0.84
LMO3-210ENST00000453727 TSPY2A6NKD2 308 aa9.8□□□□□ -0.84
LMO3-210ENST00000453727 F13A1P00488 732 aa9.8□□□□□ -0.84
LMO3-210ENST00000453727 PRR29P0C7W0 189 aa9.8□□□□□ -0.84
LMO3-210ENST00000453727 SPDYE6P0CI01 402 aa9.8□□□□□ -0.84
LMO3-210ENST00000453727 TNNT1P13805 278 aa9.8□□□□□ -0.84
LMO3-210ENST00000453727 FDPSP14324 419 aaKnown RBP9.8□□□□□ -0.84
LMO3-210ENST00000453727 PDCP20941 246 aa9.8□□□□□ -0.84
LMO3-210ENST00000453727 CDC27P30260 824 aa9.8□□□□□ -0.84
LMO3-210ENST00000453727 BMS1Q14692 1282 aaKnown RBP9.8□□□□□ -0.84
LMO3-210ENST00000453727 DLGAP5Q15398 846 aa9.8□□□□□ -0.84
LMO3-210ENST00000453727 KMT5BQ4FZB7 885 aa9.8□□□□□ -0.84
LMO3-210ENST00000453727 CDC37L1Q7L3B6 337 aa9.8□□□□□ -0.84
LMO3-210ENST00000453727 C10orf67Q8IYJ2 551 aa9.8□□□□□ -0.84
LMO3-210ENST00000453727 TMTC2Q8N394 836 aa9.8□□□□□ -0.84
LMO3-210ENST00000453727 GPATCH11Q8N954 259 aa9.8□□□□□ -0.84
LMO3-210ENST00000453727 MKNK2Q9HBH9 465 aa9.8□□□□□ -0.84
LMO3-210ENST00000453727 CWC15Q9P013 229 aaKnown RBP9.8□□□□□ -0.84
LMO3-210ENST00000453727 CEP83Q9Y592 693 aa9.8□□□□□ -0.84
LMO3-210ENST00000453727 SBF1O95248 1867 aa9.8□□□□□ -0.84
LMO3-210ENST00000453727 TCHHQ07283 1943 aa9.8□□□□□ -0.84
LMO3-210ENST00000453727 GOLGA8AA7E2F4 631 aa9.8□□□□□ -0.84
LMO3-210ENST00000453727 CPLX1O14810 134 aa9.8□□□□□ -0.84
LMO3-210ENST00000453727 RPS12P25398 132 aaKnown RBP9.8□□□□□ -0.84
LMO3-210ENST00000453727 TFAP4Q01664 338 aa9.8□□□□□ -0.84
LMO3-210ENST00000453727 NAA30Q147X3 362 aaPredicted RBP9.8□□□□□ -0.84
LMO3-210ENST00000453727 FOXD4L6Q3SYB3 417 aaPredicted RBP9.8□□□□□ -0.84
LMO3-210ENST00000453727 FOXD4L3Q6VB84 417 aaPredicted RBP9.8□□□□□ -0.84
LMO3-210ENST00000453727 C16orf86Q6ZW13 317 aa9.8□□□□□ -0.84
LMO3-210ENST00000453727 OSBPL5Q9H0X9 879 aaPredicted RBP9.8□□□□□ -0.84
LMO3-210ENST00000453727 FAM217BQ9NTX9 383 aaPredicted RBP9.8□□□□□ -0.84
LMO3-210ENST00000453727 FAM53CQ9NYF3 392 aa9.8□□□□□ -0.84
LMO3-210ENST00000453727 ZNF541Q9H0D2 1346 aa9.79□□□□□ -0.84
LMO3-210ENST00000453727 SHTN1A0MZ66 631 aa9.79□□□□□ -0.84
LMO3-210ENST00000453727 CCDC172P0C7W6 258 aa9.79□□□□□ -0.84
LMO3-210ENST00000453727 GUCY2CP25092 1073 aa9.79□□□□□ -0.84
LMO3-210ENST00000453727 CDK8P49336 464 aa9.79□□□□□ -0.84
LMO3-210ENST00000453727 TCP10Q12799 353 aa9.79□□□□□ -0.84
LMO3-210ENST00000453727 GPR162Q16538 588 aa9.79□□□□□ -0.84
LMO3-210ENST00000453727 IFIT1BQ5T764 474 aaKnown RBP9.79□□□□□ -0.84
LMO3-210ENST00000453727 SYNE3Q6ZMZ3 975 aa9.79□□□□□ -0.84
LMO3-210ENST00000453727 ZFPM1Q8IX07 1006 aa9.79□□□□□ -0.84
LMO3-210ENST00000453727 ZNF654Q8IZM8 581 aa9.79□□□□□ -0.84
LMO3-210ENST00000453727 C16orf45Q96MC5 204 aaPredicted RBP9.79□□□□□ -0.84
LMO3-210ENST00000453727 IDI2Q9BXS1 227 aa9.79□□□□□ -0.84
LMO3-210ENST00000453727 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.79□□□□□ -0.84
LMO3-210ENST00000453727 MYH8P13535 1937 aa9.79□□□□□ -0.84
LMO3-210ENST00000453727 DICER1Q9UPY3 1922 aaKnown RBP9.79□□□□□ -0.84
LMO3-210ENST00000453727 NID2Q14112 1375 aa9.78□□□□□ -0.84
LMO3-210ENST00000453727 MYO1CO00159 1063 aa9.78□□□□□ -0.84
LMO3-210ENST00000453727 RASA1P20936 1047 aa9.78□□□□□ -0.84
LMO3-210ENST00000453727 GMPSP49915 693 aaPredicted RBP9.78□□□□□ -0.84
LMO3-210ENST00000453727 NTRK3Q16288 839 aa9.78□□□□□ -0.84
LMO3-210ENST00000453727 MUM1L1Q5H9M0 696 aa9.78□□□□□ -0.84
LMO3-210ENST00000453727 SPC24Q8NBT2 197 aa9.78□□□□□ -0.84
LMO3-210ENST00000453727 DPF2Q92785 391 aa9.78□□□□□ -0.84
LMO3-210ENST00000453727 MYOZ2Q9NPC6 264 aa9.78□□□□□ -0.84
LMO3-210ENST00000453727 IL17RBQ9NRM6 502 aa9.78□□□□□ -0.84
LMO3-210ENST00000453727 RNF181Q9P0P0 153 aa9.78□□□□□ -0.84
LMO3-210ENST00000453727 CLRN2A0PK11 232 aa9.78□□□□□ -0.84
LMO3-210ENST00000453727 FOSBP53539 338 aa9.78□□□□□ -0.84
LMO3-210ENST00000453727 GPS2Q13227 327 aa9.78□□□□□ -0.84
LMO3-210ENST00000453727 NOM1Q5C9Z4 860 aaKnown RBP9.78□□□□□ -0.84
LMO3-210ENST00000453727 RCSD1Q6JBY9 416 aa9.78□□□□□ -0.84
LMO3-210ENST00000453727 SYT10Q6XYQ8 523 aa9.78□□□□□ -0.84
LMO3-210ENST00000453727 TTC6Q86TZ1 520 aa9.78□□□□□ -0.84
LMO3-210ENST00000453727 FERMT3Q86UX7 667 aa9.78□□□□□ -0.84
LMO3-210ENST00000453727 ZNF444Q8N0Y2 327 aaPredicted RBP9.78□□□□□ -0.84
LMO3-210ENST00000453727 MTMR14Q8NCE2 650 aa9.78□□□□□ -0.84
LMO3-210ENST00000453727 NUP133Q8WUM0 1156 aa9.78□□□□□ -0.84
LMO3-210ENST00000453727 KCNF1Q9H3M0 494 aa9.78□□□□□ -0.84
LMO3-210ENST00000453727 FAM198AQ9UFP1 575 aa9.78□□□□□ -0.84
LMO3-210ENST00000453727 SIPA1L1O43166 1804 aa9.77□□□□□ -0.84
LMO3-210ENST00000453727 WNT10BO00744 389 aa9.77□□□□□ -0.84
LMO3-210ENST00000453727 TSPY3P0CV98 308 aa9.77□□□□□ -0.84
LMO3-210ENST00000453727 TSPY8P0CW00 308 aa9.77□□□□□ -0.84
LMO3-210ENST00000453727 NT5C2P49902 561 aa9.77□□□□□ -0.84
LMO3-210ENST00000453727 GABPAQ06546 454 aa9.77□□□□□ -0.84
LMO3-210ENST00000453727 RTN1Q16799 776 aa9.77□□□□□ -0.84
LMO3-210ENST00000453727 NBPF9Q3BBW0 867 aa9.77□□□□□ -0.84
LMO3-210ENST00000453727 RBM26Q5T8P6 1007 aaKnown RBP9.77□□□□□ -0.84
LMO3-210ENST00000453727 KRBA2Q6ZNG9 492 aa9.77□□□□□ -0.84
LMO3-210ENST00000453727 MICALL2Q8IY33 904 aa9.77□□□□□ -0.84
LMO3-210ENST00000453727 GPC2Q8N158 579 aa9.77□□□□□ -0.84
LMO3-210ENST00000453727 FANCBQ8NB91 859 aa9.77□□□□□ -0.84
LMO3-210ENST00000453727 PHKBQ93100 1093 aa9.77□□□□□ -0.84
LMO3-210ENST00000453727 ZNF287Q9HBT7 754 aa9.77□□□□□ -0.84
LMO3-210ENST00000453727 ST7Q9NRC1 585 aa9.77□□□□□ -0.84
LMO3-210ENST00000453727 TMOD2Q9NZR1 351 aa9.77□□□□□ -0.84
LMO3-210ENST00000453727 ORC3Q9UBD5 711 aaPredicted RBP9.77□□□□□ -0.84
LMO3-210ENST00000453727 CNOT7Q9UIV1 285 aaKnown RBP9.77□□□□□ -0.84
LMO3-210ENST00000453727 H3BQV1 296 aa9.77□□□□□ -0.85
LMO3-210ENST00000453727 MYO1BO43795 1136 aa9.77□□□□□ -0.85
LMO3-210ENST00000453727 EGFRP00533 1210 aa9.77□□□□□ -0.85
LMO3-210ENST00000453727 RCAN1P53805 252 aa9.77□□□□□ -0.85
LMO3-210ENST00000453727 ZNF280AP59817 542 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms