RNA–Protein interactions for RNA: ENST00000453466.1

PMPCB-205, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,509 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-205ENST00000453466 ASCC2Q9H1I8 757 aaPredicted RBP23.61■■□□□ 1.37
PMPCB-205ENST00000453466 MTMR4Q9NYA4 1195 aa23.61■■□□□ 1.37
PMPCB-205ENST00000453466 CLIP2Q9UDT6 1046 aa23.61■■□□□ 1.37
PMPCB-205ENST00000453466 TACC3Q9Y6A5 838 aa23.61■■□□□ 1.37
PMPCB-205ENST00000453466 USP17L15C9J2P7 530 aa23.6■■□□□ 1.37
PMPCB-205ENST00000453466 USP17L13C9JLJ4 530 aa23.6■■□□□ 1.37
PMPCB-205ENST00000453466 USP17L11C9JVI0 530 aa23.6■■□□□ 1.37
PMPCB-205ENST00000453466 USP17L18D6R9N7 530 aa23.6■■□□□ 1.37
PMPCB-205ENST00000453466 USP17L22D6RA61 530 aa23.6■■□□□ 1.37
PMPCB-205ENST00000453466 USP17L17D6RBQ6 530 aa23.6■■□□□ 1.37
PMPCB-205ENST00000453466 USP17L19D6RCP7 530 aa23.6■■□□□ 1.37
PMPCB-205ENST00000453466 USP17L20D6RJB6 530 aa23.6■■□□□ 1.37
PMPCB-205ENST00000453466 USP17L24Q0WX57 530 aa23.6■■□□□ 1.37
PMPCB-205ENST00000453466 C17orf99Q6UX52 265 aa23.6■■□□□ 1.37
PMPCB-205ENST00000453466 TBC1D10CQ8IV04 446 aa23.6■■□□□ 1.37
PMPCB-205ENST00000453466 LPAR1Q92633 364 aa23.6■■□□□ 1.37
PMPCB-205ENST00000453466 CEP95Q96GE4 821 aa23.6■■□□□ 1.37
PMPCB-205ENST00000453466 NBPF3Q9H094 633 aa23.6■■□□□ 1.37
PMPCB-205ENST00000453466 GOPCQ9HD26 462 aa23.6■■□□□ 1.37
PMPCB-205ENST00000453466 CPA4Q9UI42 421 aa23.6■■□□□ 1.37
PMPCB-205ENST00000453466 TTLL1O95922 423 aa23.59■■□□□ 1.37
PMPCB-205ENST00000453466 VCAM1P19320 739 aa23.59■■□□□ 1.37
PMPCB-205ENST00000453466 NT5C2P49902 561 aa23.59■■□□□ 1.37
PMPCB-205ENST00000453466 RABEP1Q15276 862 aa23.59■■□□□ 1.37
PMPCB-205ENST00000453466 COL13A1Q5TAT6 717 aaPredicted RBP23.59■■□□□ 1.37
PMPCB-205ENST00000453466 VCPKMTQ9H867 229 aa23.59■■□□□ 1.37
PMPCB-205ENST00000453466 RBM8AQ9Y5S9 174 aaKnown RBP23.59■■□□□ 1.37
PMPCB-205ENST00000453466 ESR2Q92731 530 aa23.59■■□□□ 1.37
PMPCB-205ENST00000453466 ERO1AQ96HE7 468 aa23.59■■□□□ 1.37
PMPCB-205ENST00000453466 PLIN4Q96Q06 1357 aa23.58■■□□□ 1.37
PMPCB-205ENST00000453466 MYH8P13535 1937 aa23.58■■□□□ 1.37
PMPCB-205ENST00000453466 GCLCP48506 637 aaPredicted RBP23.58■■□□□ 1.36
PMPCB-205ENST00000453466 MKL1Q969V6 931 aa23.58■■□□□ 1.36
PMPCB-205ENST00000453466 RPAP3Q9H6T3 665 aaPredicted RBP23.58■■□□□ 1.36
PMPCB-205ENST00000453466 ADGRA2Q96PE1 1338 aa23.57■■□□□ 1.36
PMPCB-205ENST00000453466 KIF22Q14807 665 aa23.57■■□□□ 1.36
PMPCB-205ENST00000453466 ARHGEF6Q15052 776 aa23.57■■□□□ 1.36
PMPCB-205ENST00000453466 TSGA10IPQ3SY00 556 aa23.57■■□□□ 1.36
PMPCB-205ENST00000453466 RNF20Q5VTR2 975 aa23.57■■□□□ 1.36
PMPCB-205ENST00000453466 CATSPERGQ6ZRH7 1159 aa23.57■■□□□ 1.36
PMPCB-205ENST00000453466 P2RX7Q99572 595 aaKnown RBP23.57■■□□□ 1.36
PMPCB-205ENST00000453466 SYNPO2Q9UMS6 1093 aa23.57■■□□□ 1.36
PMPCB-205ENST00000453466 PTPRFP10586 1907 aa23.57■■□□□ 1.36
PMPCB-205ENST00000453466 RAD21O60216 631 aa23.56■■□□□ 1.36
PMPCB-205ENST00000453466 SPICE1Q8N0Z3 855 aa23.56■■□□□ 1.36
PMPCB-205ENST00000453466 SNX21Q969T3 373 aa23.56■■□□□ 1.36
PMPCB-205ENST00000453466 KRT23Q9C075 422 aa23.56■■□□□ 1.36
PMPCB-205ENST00000453466 CNNM2Q9H8M5 875 aa23.56■■□□□ 1.36
PMPCB-205ENST00000453466 TCP11L1Q9NUJ3 509 aa23.56■■□□□ 1.36
PMPCB-205ENST00000453466 STX8Q9UNK0 236 aa23.56■■□□□ 1.36
PMPCB-205ENST00000453466 BCRP11274 1271 aa23.55■■□□□ 1.36
PMPCB-205ENST00000453466 CREB3L3Q68CJ9 461 aa23.55■■□□□ 1.36
PMPCB-205ENST00000453466 IL17RBQ9NRM6 502 aa23.55■■□□□ 1.36
PMPCB-205ENST00000453466 SNX14Q9Y5W7 946 aa23.55■■□□□ 1.36
PMPCB-205ENST00000453466 F5H6K3 240 aa23.54■■□□□ 1.36
PMPCB-205ENST00000453466 WDR46O15213 610 aaKnown RBP23.54■■□□□ 1.36
PMPCB-205ENST00000453466 CYP21A2P08686 494 aa23.54■■□□□ 1.36
PMPCB-205ENST00000453466 ZKSCAN1P17029 563 aaPredicted RBP23.54■■□□□ 1.36
PMPCB-205ENST00000453466 HERVK_113P62684 666 aa23.54■■□□□ 1.36
PMPCB-205ENST00000453466 KLRC3Q07444 240 aa23.54■■□□□ 1.36
PMPCB-205ENST00000453466 BECN1Q14457 450 aa23.54■■□□□ 1.36
PMPCB-205ENST00000453466 KIAA1755Q5JYT7 1200 aa23.54■■□□□ 1.36
PMPCB-205ENST00000453466 CTU1Q7Z7A3 348 aaKnown RBP23.54■■□□□ 1.36
PMPCB-205ENST00000453466 CD99L2Q8TCZ2 262 aa23.54■■□□□ 1.36
PMPCB-205ENST00000453466 GTF3C2Q8WUA4 911 aaPredicted RBP23.54■■□□□ 1.36
PMPCB-205ENST00000453466 TANGO6Q9C0B7 1094 aa23.54■■□□□ 1.36
PMPCB-205ENST00000453466 LOC285556D6RIA3 1793 aa23.54■■□□□ 1.36
PMPCB-205ENST00000453466 NEDD4P46934 1319 aa23.54■■□□□ 1.36
PMPCB-205ENST00000453466 SLC27A2O14975 620 aa23.54■■□□□ 1.36
PMPCB-205ENST00000453466 NMT2O60551 498 aa23.54■■□□□ 1.36
PMPCB-205ENST00000453466 TRDNQ13061 729 aa23.54■■□□□ 1.36
PMPCB-205ENST00000453466 COG2Q14746 738 aa23.54■■□□□ 1.36
PMPCB-205ENST00000453466 ANKRD13CQ8N6S4 541 aa23.54■■□□□ 1.36
PMPCB-205ENST00000453466 HOXC10Q9NYD6 342 aa23.54■■□□□ 1.36
PMPCB-205ENST00000453466 CASP8AP2Q9UKL3 1982 aa23.53■■□□□ 1.36
PMPCB-205ENST00000453466 KDM4AO75164 1064 aa23.53■■□□□ 1.36
PMPCB-205ENST00000453466 LACTBP83111 547 aaPredicted RBP23.53■■□□□ 1.36
PMPCB-205ENST00000453466 CCDC178Q5BJE1 867 aa23.53■■□□□ 1.36
PMPCB-205ENST00000453466 RASEFQ8IZ41 740 aa23.53■■□□□ 1.36
PMPCB-205ENST00000453466 TTC14Q96N46 770 aa23.53■■□□□ 1.36
PMPCB-205ENST00000453466 TM6SF1Q9BZW5 370 aa23.53■■□□□ 1.36
PMPCB-205ENST00000453466 B4E1Z4 1266 aa23.52■■□□□ 1.36
PMPCB-205ENST00000453466 FAM110CQ1W6H9 321 aa23.52■■□□□ 1.36
PMPCB-205ENST00000453466 IQCA1Q86XH1 822 aa23.52■■□□□ 1.36
PMPCB-205ENST00000453466 GMCL1P1Q8NEA9 526 aa23.52■■□□□ 1.36
PMPCB-205ENST00000453466 NOVP48745 357 aa23.51■■□□□ 1.35
PMPCB-205ENST00000453466 LRRC47Q8N1G4 583 aaKnown RBP23.51■■□□□ 1.35
PMPCB-205ENST00000453466 EFCC1Q9HA90 598 aa23.51■■□□□ 1.35
PMPCB-205ENST00000453466 NDUFB10O96000 172 aa23.5■■□□□ 1.35
PMPCB-205ENST00000453466 PKN2Q16513 984 aaKnown RBP23.5■■□□□ 1.35
PMPCB-205ENST00000453466 ZSWIM5Q9P217 1185 aa23.5■■□□□ 1.35
PMPCB-205ENST00000453466 TRIM17Q9Y577 477 aa23.5■■□□□ 1.35
PMPCB-205ENST00000453466 GREB1LQ9C091 1923 aaPredicted RBP23.5■■□□□ 1.35
PMPCB-205ENST00000453466 E7EWF7 191 aa23.49■■□□□ 1.35
PMPCB-205ENST00000453466 FLOT1O75955 427 aa23.49■■□□□ 1.35
PMPCB-205ENST00000453466 GNRH1P01148 92 aa23.49■■□□□ 1.35
PMPCB-205ENST00000453466 KRT32Q14532 448 aa23.49■■□□□ 1.35
PMPCB-205ENST00000453466 FAM83BQ5T0W9 1011 aa23.49■■□□□ 1.35
PMPCB-205ENST00000453466 SLFN13Q68D06 897 aa23.49■■□□□ 1.35
PMPCB-205ENST00000453466 LBX2Q6XYB7 198 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms