RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 EIF1ADQ8N9N8 165 aaKnown RBP9.36□□□□□ -0.91
SMCO1-202ENST00000452776 RBM33Q96EV2 1170 aaKnown RBP9.36□□□□□ -0.91
SMCO1-202ENST00000452776 CYFIP2Q96F07 1278 aa9.36□□□□□ -0.91
SMCO1-202ENST00000452776 RNF14Q9UBS8 474 aa9.36□□□□□ -0.91
SMCO1-202ENST00000452776 NFE2L3Q9Y4A8 694 aa9.36□□□□□ -0.91
SMCO1-202ENST00000452776 NEDD4P46934 1319 aa9.36□□□□□ -0.91
SMCO1-202ENST00000452776 E7ENQ6 273 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 KIF3BO15066 747 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 PPIP5K2O43314 1243 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 PRC1O43663 620 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 SPAG1Q07617 926 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 RBL2Q08999 1139 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 GOLGA8FQ08AF8 430 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 GOLGA8DPQ0D2H9 430 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 TMED1Q13445 227 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 BIRC3Q13489 604 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 NCAPH2Q6IBW4 605 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 RUFY4Q6ZNE9 571 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 MAATS1Q7Z4T9 603 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 SESTD1Q86VW0 696 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 LMNTD2Q8IXW0 634 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 CCDC155Q8N6L0 562 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 B4GALNT2Q8NHY0 566 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 ATP6V1G3Q96LB4 118 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 USP44Q9H0E7 712 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 HAUS2Q9NVX0 235 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 CTNNAL1Q9UBT7 734 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 BAIAP2L1Q9UHR4 511 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 ATP7BP35670 1465 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 CD163L1Q9NR16 1453 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 PREX1Q8TCU6 1659 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 RFX7Q2KHR2 1363 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 F6X3S4 739 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 FLOT1O75955 427 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 MYO1EQ12965 1108 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 PAK2Q13177 524 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 NMIQ13287 307 aaPredicted RBP9.35□□□□□ -0.91
SMCO1-202ENST00000452776 ZNF268Q14587 947 aaPredicted RBP9.35□□□□□ -0.91
SMCO1-202ENST00000452776 TTMPQ5BVD1 217 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 C1QTNF12Q5T7M4 302 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 MYSM1Q5VVJ2 828 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 SPATA1Q5VX52 437 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 IQCKQ8N0W5 287 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 GBP7Q8N8V2 638 aaPredicted RBP9.35□□□□□ -0.91
SMCO1-202ENST00000452776 CCDC63Q8NA47 563 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 HVCN1Q96D96 273 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 RNPC3Q96LT9 517 aaKnown RBP9.35□□□□□ -0.91
SMCO1-202ENST00000452776 MMS19Q96T76 1030 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 CDC5LQ99459 802 aaKnown RBP9.35□□□□□ -0.91
SMCO1-202ENST00000452776 GORASP1Q9BQQ3 440 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 AGXT2Q9BYV1 514 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 TSGA10Q9BZW7 698 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 IQCGQ9H095 443 aaKnown RBP9.35□□□□□ -0.91
SMCO1-202ENST00000452776 SIL1Q9H173 461 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 EHD4Q9H223 541 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 SENP2Q9HC62 589 aa9.35□□□□□ -0.91
SMCO1-202ENST00000452776 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.35□□□□□ -0.91
SMCO1-202ENST00000452776 ZMYM6O95789 1325 aa9.34□□□□□ -0.91
SMCO1-202ENST00000452776 SH3TC1Q8TE82 1336 aa9.34□□□□□ -0.91
SMCO1-202ENST00000452776 ITSN1Q15811 1721 aa9.34□□□□□ -0.91
SMCO1-202ENST00000452776 CREB3O43889 395 aa9.34□□□□□ -0.91
SMCO1-202ENST00000452776 SKAP2O75563 359 aaPredicted RBP9.34□□□□□ -0.91
SMCO1-202ENST00000452776 ALADP13716 330 aa9.34□□□□□ -0.91
SMCO1-202ENST00000452776 ATP4AP20648 1035 aa9.34□□□□□ -0.91
SMCO1-202ENST00000452776 PBX1P40424 430 aa9.34□□□□□ -0.91
SMCO1-202ENST00000452776 PLCD1P51178 756 aa9.34□□□□□ -0.91
SMCO1-202ENST00000452776 MTF1Q14872 753 aa9.34□□□□□ -0.91
SMCO1-202ENST00000452776 RRS1Q15050 365 aaKnown RBP9.34□□□□□ -0.91
SMCO1-202ENST00000452776 IMMTQ16891 758 aaKnown RBP9.34□□□□□ -0.91
SMCO1-202ENST00000452776 THEMIS2Q5TEJ8 643 aa9.34□□□□□ -0.91
SMCO1-202ENST00000452776 CFAP61Q8NHU2 1237 aa9.34□□□□□ -0.91
SMCO1-202ENST00000452776 WHAMMQ8TF30 809 aa9.34□□□□□ -0.91
SMCO1-202ENST00000452776 JAKMIP2Q96AA8 810 aa9.34□□□□□ -0.91
SMCO1-202ENST00000452776 RBM41Q96IZ5 413 aaKnown RBP9.34□□□□□ -0.91
SMCO1-202ENST00000452776 SEC16BQ96JE7 1060 aa9.34□□□□□ -0.91
SMCO1-202ENST00000452776 PLEKHG4BQ96PX9 1271 aa9.34□□□□□ -0.91
SMCO1-202ENST00000452776 NUP58Q9BVL2 599 aa9.34□□□□□ -0.91
SMCO1-202ENST00000452776 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.34□□□□□ -0.91
SMCO1-202ENST00000452776 ZNHIT6Q9NWK9 470 aaKnown RBP9.34□□□□□ -0.91
SMCO1-202ENST00000452776 PCDHGA4Q9Y5G9 962 aa9.34□□□□□ -0.91
SMCO1-202ENST00000452776 EPN1Q9Y6I3 576 aaPredicted RBP9.34□□□□□ -0.91
SMCO1-202ENST00000452776 ADGRB3O60242 1522 aa9.34□□□□□ -0.91
SMCO1-202ENST00000452776 ANKARQ7Z5J8 1434 aa9.34□□□□□ -0.91
SMCO1-202ENST00000452776 SALL1Q9NSC2 1324 aa9.34□□□□□ -0.91
SMCO1-202ENST00000452776 MED23Q9ULK4 1368 aa9.34□□□□□ -0.92
SMCO1-202ENST00000452776 NEXMIFQ5QGS0 1516 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 SPDYE3A6NKU9 549 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 DNM1LO00429 736 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 IFIT3O14879 490 aaKnown RBP9.33□□□□□ -0.92
SMCO1-202ENST00000452776 TRAPPC3O43617 180 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 TAF5LO75529 589 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 PAEPP09466 180 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 ALDH3A1P30838 453 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 CASP14P31944 242 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 PAFAH1B1P43034 410 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 HDLBPQ00341 1268 aaKnown RBP9.33□□□□□ -0.92
SMCO1-202ENST00000452776 SNX1Q13596 522 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 PPP1R7Q15435 360 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 CCDC96Q2M329 555 aa9.33□□□□□ -0.92
SMCO1-202ENST00000452776 SGSM1Q2NKQ1 1148 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms