RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 SUCLG2Q96I99 432 aa20.89■□□□□ 0.93
PTPA-223ENST00000452489 NOD2Q9HC29 1040 aa20.89■□□□□ 0.93
PTPA-223ENST00000452489 MGRN1O60291 552 aa20.88■□□□□ 0.93
PTPA-223ENST00000452489 HERVK_113P62684 666 aa20.88■□□□□ 0.93
PTPA-223ENST00000452489 NUDT16Q96DE0 195 aaKnown RBP20.88■□□□□ 0.93
PTPA-223ENST00000452489 KAZALD1Q96I82 304 aa20.88■□□□□ 0.93
PTPA-223ENST00000452489 NUP58Q9BVL2 599 aa20.88■□□□□ 0.93
PTPA-223ENST00000452489 HAUS4Q9H6D7 363 aa20.88■□□□□ 0.93
PTPA-223ENST00000452489 BAIAP2L1Q9UHR4 511 aa20.88■□□□□ 0.93
PTPA-223ENST00000452489 HPS5Q9UPZ3 1129 aa20.88■□□□□ 0.93
PTPA-223ENST00000452489 WASLO00401 505 aaPredicted RBP20.88■□□□□ 0.93
PTPA-223ENST00000452489 ATP6V1G2O95670 118 aa20.88■□□□□ 0.93
PTPA-223ENST00000452489 KRT9P35527 623 aa20.88■□□□□ 0.93
PTPA-223ENST00000452489 RAB27AP51159 221 aa20.88■□□□□ 0.93
PTPA-223ENST00000452489 EPHB4P54760 987 aa20.88■□□□□ 0.93
PTPA-223ENST00000452489 TRAF1Q13077 416 aa20.88■□□□□ 0.93
PTPA-223ENST00000452489 SPATA1Q5VX52 437 aa20.88■□□□□ 0.93
PTPA-223ENST00000452489 JADE2Q9NQC1 790 aa20.88■□□□□ 0.93
PTPA-223ENST00000452489 BATF3Q9NR55 127 aa20.88■□□□□ 0.93
PTPA-223ENST00000452489 TRPC6Q9Y210 931 aa20.88■□□□□ 0.93
PTPA-223ENST00000452489 SYNRGQ9UMZ2 1314 aa20.88■□□□□ 0.93
PTPA-223ENST00000452489 KLF18A0A0U1RQI7 1052 aa20.87■□□□□ 0.93
PTPA-223ENST00000452489 CPLX1O14810 134 aa20.87■□□□□ 0.93
PTPA-223ENST00000452489 PSMD2Q13200 908 aa20.87■□□□□ 0.93
PTPA-223ENST00000452489 FILIP1LQ4L180 1135 aa20.87■□□□□ 0.93
PTPA-223ENST00000452489 CCDC70Q6NSX1 233 aa20.87■□□□□ 0.93
PTPA-223ENST00000452489 KIAA1328Q86T90 577 aa20.87■□□□□ 0.93
PTPA-223ENST00000452489 ANKRD24Q8TF21 1146 aa20.87■□□□□ 0.93
PTPA-223ENST00000452489 NUCKS1Q9H1E3 243 aaKnown RBP20.87■□□□□ 0.93
PTPA-223ENST00000452489 DBNLQ9UJU6 430 aaKnown RBP20.87■□□□□ 0.93
PTPA-223ENST00000452489 OVOS2A0A0G2JMS6 1433 aa20.87■□□□□ 0.93
PTPA-223ENST00000452489 OVOS2A0A0J9YW53 1432 aa20.87■□□□□ 0.93
PTPA-223ENST00000452489 OVOS2Q6IE36 1432 aa20.87■□□□□ 0.93
PTPA-223ENST00000452489 ERCC5P28715 1186 aaPredicted RBP20.87■□□□□ 0.93
PTPA-223ENST00000452489 QPCTQ16769 361 aa20.87■□□□□ 0.93
PTPA-223ENST00000452489 CDKAL1Q5VV42 579 aa20.87■□□□□ 0.93
PTPA-223ENST00000452489 YIPF3Q9GZM5 350 aa20.87■□□□□ 0.93
PTPA-223ENST00000452489 CEP170BQ9Y4F5 1589 aaPredicted RBP20.87■□□□□ 0.93
PTPA-223ENST00000452489 XRCC4Q13426 336 aa20.86■□□□□ 0.93
PTPA-223ENST00000452489 MIS18BP1Q6P0N0 1132 aa20.86■□□□□ 0.93
PTPA-223ENST00000452489 SMYD4Q8IYR2 804 aaPredicted RBP20.86■□□□□ 0.93
PTPA-223ENST00000452489 CCDC43Q96MW1 224 aaKnown RBP20.86■□□□□ 0.93
PTPA-223ENST00000452489 MYO5BQ9ULV0 1848 aa20.86■□□□□ 0.93
PTPA-223ENST00000452489 BACH1O14867 736 aa20.86■□□□□ 0.93
PTPA-223ENST00000452489 IPO7O95373 1038 aaKnown RBP20.86■□□□□ 0.93
PTPA-223ENST00000452489 IFFO1Q0D2I5 559 aa20.86■□□□□ 0.93
PTPA-223ENST00000452489 CCDC181Q5TID7 509 aa20.86■□□□□ 0.93
PTPA-223ENST00000452489 ITIH6Q6UXX5 1313 aa20.86■□□□□ 0.93
PTPA-223ENST00000452489 ANKARQ7Z5J8 1434 aa20.86■□□□□ 0.93
PTPA-223ENST00000452489 C3orf20Q8ND61 904 aa20.86■□□□□ 0.93
PTPA-223ENST00000452489 ALKQ9UM73 1620 aa20.86■□□□□ 0.93
PTPA-223ENST00000452489 MAP3K2Q9Y2U5 619 aa20.86■□□□□ 0.93
PTPA-223ENST00000452489 CCDC9Q9Y3X0 531 aaKnown RBP20.86■□□□□ 0.93
PTPA-223ENST00000452489 ELF3P78545 371 aaPredicted RBP20.85■□□□□ 0.93
PTPA-223ENST00000452489 EMBQ6PCB8 327 aa20.85■□□□□ 0.93
PTPA-223ENST00000452489 EBF2Q9HAK2 575 aa20.85■□□□□ 0.93
PTPA-223ENST00000452489 SMARCAL1Q9NZC9 954 aa20.85■□□□□ 0.93
PTPA-223ENST00000452489 IDEP14735 1019 aa20.85■□□□□ 0.93
PTPA-223ENST00000452489 MMGT1Q8N4V1 131 aa20.85■□□□□ 0.93
PTPA-223ENST00000452489 CUL5Q93034 780 aa20.85■□□□□ 0.93
PTPA-223ENST00000452489 SPAG5Q96R06 1193 aa20.85■□□□□ 0.93
PTPA-223ENST00000452489 CTAGE1Q96RT6 745 aa20.85■□□□□ 0.93
PTPA-223ENST00000452489 EYA1Q99502 592 aa20.85■□□□□ 0.93
PTPA-223ENST00000452489 VPS16Q9H269 839 aa20.85■□□□□ 0.93
PTPA-223ENST00000452489 LRRC37A3O60309 1634 aa20.85■□□□□ 0.93
PTPA-223ENST00000452489 RCCD1A6NED2 376 aa20.84■□□□□ 0.93
PTPA-223ENST00000452489 SMNDC1O75940 238 aaKnown RBP eCLIP20.84■□□□□ 0.93
PTPA-223ENST00000452489 HPDP32754 393 aaPredicted RBP20.84■□□□□ 0.93
PTPA-223ENST00000452489 L3MBTL1Q9Y468 752 aa20.84■□□□□ 0.93
PTPA-223ENST00000452489 DUSP10Q9Y6W6 482 aa20.84■□□□□ 0.93
PTPA-223ENST00000452489 C3P01024 1663 aa20.84■□□□□ 0.93
PTPA-223ENST00000452489 CASP1P29466 404 aa20.84■□□□□ 0.93
PTPA-223ENST00000452489 IQCEQ6IPM2 695 aa20.84■□□□□ 0.93
PTPA-223ENST00000452489 KRI1Q8N9T8 703 aaKnown RBP20.84■□□□□ 0.93
PTPA-223ENST00000452489 LACRTQ9GZZ8 138 aa20.84■□□□□ 0.93
PTPA-223ENST00000452489 N4BP3O15049 544 aa20.83■□□□□ 0.93
PTPA-223ENST00000452489 CFAP58Q5T655 872 aa20.83■□□□□ 0.93
PTPA-223ENST00000452489 KRT40Q6A162 431 aa20.83■□□□□ 0.93
PTPA-223ENST00000452489 CREG2Q8IUH2 290 aa20.83■□□□□ 0.93
PTPA-223ENST00000452489 TRIML1Q8N9V2 468 aa20.83■□□□□ 0.93
PTPA-223ENST00000452489 CAVIN3Q969G5 261 aa20.83■□□□□ 0.93
PTPA-223ENST00000452489 ALG1Q9BT22 464 aa20.83■□□□□ 0.93
PTPA-223ENST00000452489 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.83■□□□□ 0.93
PTPA-223ENST00000452489 LEMD3Q9Y2U8 911 aa20.83■□□□□ 0.93
PTPA-223ENST00000452489 C15orf41Q9Y2V0 281 aa20.83■□□□□ 0.93
PTPA-223ENST00000452489 FAM153BP0C7A2 387 aa20.83■□□□□ 0.92
PTPA-223ENST00000452489 CUL4BQ13620 913 aa20.83■□□□□ 0.92
PTPA-223ENST00000452489 FAM153CQ494X1 144 aa20.83■□□□□ 0.92
PTPA-223ENST00000452489 IQCKQ8N0W5 287 aa20.83■□□□□ 0.92
PTPA-223ENST00000452489 FAM210AQ96ND0 272 aa20.83■□□□□ 0.92
PTPA-223ENST00000452489 ZNF570Q96NI8 536 aa20.83■□□□□ 0.92
PTPA-223ENST00000452489 PLCD4Q9BRC7 762 aa20.83■□□□□ 0.92
PTPA-223ENST00000452489 HOMER3Q9NSC5 361 aa20.83■□□□□ 0.92
PTPA-223ENST00000452489 FAM153AQ9UHL3 310 aa20.83■□□□□ 0.92
PTPA-223ENST00000452489 RPS6KL1Q9Y6S9 549 aa20.83■□□□□ 0.92
PTPA-223ENST00000452489 MON2Q7Z3U7 1717 aa20.83■□□□□ 0.92
PTPA-223ENST00000452489 ANP32DO95626 131 aa20.82■□□□□ 0.92
PTPA-223ENST00000452489 ITGB3BPQ13352 177 aaPredicted RBP20.82■□□□□ 0.92
PTPA-223ENST00000452489 BYSLQ13895 437 aaKnown RBP20.82■□□□□ 0.92
PTPA-223ENST00000452489 KRT31Q15323 416 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms