RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 BAZ2AQ9UIF9 1905 aaKnown RBP12.4□□□□□ -0.42
PKP4-206ENST00000452162 YEATS4O95619 227 aa12.4□□□□□ -0.42
PKP4-206ENST00000452162 BAG3O95817 575 aa12.4□□□□□ -0.42
PKP4-206ENST00000452162 PRKG1Q13976 671 aa12.4□□□□□ -0.42
PKP4-206ENST00000452162 WTAPQ15007 396 aa12.4□□□□□ -0.42
PKP4-206ENST00000452162 SART3Q15020 963 aaKnown RBP12.4□□□□□ -0.42
PKP4-206ENST00000452162 MOB2Q70IA6 237 aa12.4□□□□□ -0.42
PKP4-206ENST00000452162 CKAP2LQ8IYA6 745 aa12.4□□□□□ -0.42
PKP4-206ENST00000452162 LINC00301Q8NCQ3 95 aa12.4□□□□□ -0.42
PKP4-206ENST00000452162 NOL10Q9BSC4 688 aaKnown RBP12.4□□□□□ -0.42
PKP4-206ENST00000452162 IDI2Q9BXS1 227 aa12.4□□□□□ -0.42
PKP4-206ENST00000452162 GBA2Q9HCG7 927 aaPredicted RBP12.4□□□□□ -0.42
PKP4-206ENST00000452162 POLR3EQ9NVU0 708 aa12.4□□□□□ -0.42
PKP4-206ENST00000452162 LAMB1P07942 1786 aa12.4□□□□□ -0.42
PKP4-206ENST00000452162 MINDY4BA8MYZ0 360 aa12.4□□□□□ -0.43
PKP4-206ENST00000452162 SMIM22K7EJ46 135 aa12.4□□□□□ -0.43
PKP4-206ENST00000452162 RCAN1P53805 252 aa12.4□□□□□ -0.43
PKP4-206ENST00000452162 PICALMQ13492 652 aa12.4□□□□□ -0.43
PKP4-206ENST00000452162 TMED8Q6PL24 325 aaPredicted RBP12.4□□□□□ -0.43
PKP4-206ENST00000452162 TEX11Q8IYF3 940 aa12.4□□□□□ -0.43
PKP4-206ENST00000452162 ENGASEQ8NFI3 743 aa12.4□□□□□ -0.43
PKP4-206ENST00000452162 ZKSCAN3Q9BRR0 538 aa12.4□□□□□ -0.43
PKP4-206ENST00000452162 TOMM22Q9NS69 142 aa12.4□□□□□ -0.43
PKP4-206ENST00000452162 USP25Q9UHP3 1055 aa12.4□□□□□ -0.43
PKP4-206ENST00000452162 ABT1Q9ULW3 272 aaKnown RBP12.4□□□□□ -0.43
PKP4-206ENST00000452162 CLIC4Q9Y696 253 aa12.4□□□□□ -0.43
PKP4-206ENST00000452162 FMNL1O95466 1100 aaPredicted RBP12.39□□□□□ -0.43
PKP4-206ENST00000452162 POLR3DP05423 398 aaPredicted RBP12.39□□□□□ -0.43
PKP4-206ENST00000452162 FGRP09769 529 aa12.39□□□□□ -0.43
PKP4-206ENST00000452162 IFNAR1P17181 557 aa12.39□□□□□ -0.43
PKP4-206ENST00000452162 SNW1Q13573 536 aaKnown RBP12.39□□□□□ -0.43
PKP4-206ENST00000452162 SEC23AQ15436 765 aa12.39□□□□□ -0.43
PKP4-206ENST00000452162 KRT40Q6A162 431 aa12.39□□□□□ -0.43
PKP4-206ENST00000452162 FAM151AQ8WW52 585 aa12.39□□□□□ -0.43
PKP4-206ENST00000452162 CCDC39Q9UFE4 941 aa12.39□□□□□ -0.43
PKP4-206ENST00000452162 NOL7Q9UMY1 257 aaKnown RBP12.39□□□□□ -0.43
PKP4-206ENST00000452162 PCDHA7Q9UN72 937 aa12.39□□□□□ -0.43
PKP4-206ENST00000452162 A0A1W2PQ27 194 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 A0A1W2PQ64 194 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 A0A1W2PQD8 194 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 ME1P48163 572 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 SYNE3Q6ZMZ3 975 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 SAPCD2Q86UD0 394 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 STK11IPQ8N1F8 1099 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 TMTC2Q8N394 836 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 C2orf69Q8N8R5 385 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 FAM200AQ8TCP9 573 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 TGFBRAP1Q8WUH2 860 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 ESR2Q92731 530 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.38□□□□□ -0.43
PKP4-206ENST00000452162 TLL2Q9Y6L7 1015 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 MYH1P12882 1939 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 PAPPA2Q9BXP8 1791 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 CYP2D7A0A087X1C5 515 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 ERICH2A1L162 156 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 PCP11498 1178 aaKnown RBP12.38□□□□□ -0.43
PKP4-206ENST00000452162 PLCG2P16885 1265 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 NF2P35240 595 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 FAM160A1Q05DH4 1040 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 SSRP1Q08945 709 aaKnown RBP12.38□□□□□ -0.43
PKP4-206ENST00000452162 RTN1Q16799 776 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 SUPT20HL1Q3ZLR7 823 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 ADALQ6DHV7 355 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 CTR9Q6PD62 1173 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 CCDC73Q6ZRK6 1079 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 SH3BP5LQ7L8J4 393 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 FSIP1Q8NA03 581 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 KCNG4Q8TDN1 519 aa12.38□□□□□ -0.43
PKP4-206ENST00000452162 ENTPD3O75355 529 aa12.37□□□□□ -0.43
PKP4-206ENST00000452162 TTLL12Q14166 644 aaPredicted RBP12.37□□□□□ -0.43
PKP4-206ENST00000452162 STK38Q15208 465 aa12.37□□□□□ -0.43
PKP4-206ENST00000452162 ANO1Q5XXA6 986 aa12.37□□□□□ -0.43
PKP4-206ENST00000452162 MAPKAPK5Q8IW41 473 aa12.37□□□□□ -0.43
PKP4-206ENST00000452162 ZNF654Q8IZM8 581 aa12.37□□□□□ -0.43
PKP4-206ENST00000452162 UBAC1Q9BSL1 405 aa12.37□□□□□ -0.43
PKP4-206ENST00000452162 SLC26A6Q9BXS9 759 aa12.37□□□□□ -0.43
PKP4-206ENST00000452162 TNKSO95271 1327 aa12.37□□□□□ -0.43
PKP4-206ENST00000452162 DDTLA6NHG4 134 aaPredicted RBP12.37□□□□□ -0.43
PKP4-206ENST00000452162 UBE2Q2LH0YL09 131 aa12.37□□□□□ -0.43
PKP4-206ENST00000452162 CTAGE5O15320 804 aa12.37□□□□□ -0.43
PKP4-206ENST00000452162 ADCY5O95622 1261 aa12.37□□□□□ -0.43
PKP4-206ENST00000452162 HUNKP57058 714 aa12.37□□□□□ -0.43
PKP4-206ENST00000452162 ANO6Q4KMQ2 910 aa12.37□□□□□ -0.43
PKP4-206ENST00000452162 NBPF11Q86T75 865 aa12.37□□□□□ -0.43
PKP4-206ENST00000452162 MRPS27Q92552 414 aaKnown RBP12.37□□□□□ -0.43
PKP4-206ENST00000452162 MKRN1Q9UHC7 482 aaKnown RBP12.37□□□□□ -0.43
PKP4-206ENST00000452162 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.37□□□□□ -0.431e-6■■■■□ 23.2
PKP4-206ENST00000452162 OTOFQ9HC10 1997 aa12.37□□□□□ -0.43
PKP4-206ENST00000452162 SPTLC2O15270 562 aa12.36□□□□□ -0.43
PKP4-206ENST00000452162 AP5Z1O43299 807 aa12.36□□□□□ -0.43
PKP4-206ENST00000452162 SLURP2P0DP57 97 aa12.36□□□□□ -0.43
PKP4-206ENST00000452162 U2AF2P26368 475 aaKnown RBP eCLIP12.36□□□□□ -0.433e-7■■■■□ 21.5
PKP4-206ENST00000452162 MIGA2Q7L4E1 593 aa12.36□□□□□ -0.43
PKP4-206ENST00000452162 FMR1NBQ8N0W7 255 aaPredicted RBP12.36□□□□□ -0.43
PKP4-206ENST00000452162 CRNKL1Q9BZJ0 848 aaKnown RBP12.36□□□□□ -0.43
PKP4-206ENST00000452162 OSBPL5Q9H0X9 879 aaPredicted RBP12.36□□□□□ -0.43
PKP4-206ENST00000452162 DCP1AQ9NPI6 582 aaPredicted RBP12.36□□□□□ -0.43
PKP4-206ENST00000452162 ATP8A2Q9NTI2 1148 aa12.36□□□□□ -0.43
PKP4-206ENST00000452162 ZKSCAN5Q9Y2L8 839 aa12.36□□□□□ -0.43
PKP4-206ENST00000452162 FLT1P17948 1338 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms