RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 NLRC4Q9NPP4 1024 aa11.59□□□□□ -0.55
CTC1-202ENST00000449476 IGKV5-2P06315 115 aa11.59□□□□□ -0.55
CTC1-202ENST00000449476 KLHL30Q0D2K2 578 aa11.59□□□□□ -0.55
CTC1-202ENST00000449476 MORC3Q14149 939 aa11.59□□□□□ -0.55
CTC1-202ENST00000449476 USH1GQ495M9 461 aa11.59□□□□□ -0.55
CTC1-202ENST00000449476 SPATA1Q5VX52 437 aa11.59□□□□□ -0.55
CTC1-202ENST00000449476 C11orf57Q6ZUT1 292 aaPredicted RBP11.59□□□□□ -0.55
CTC1-202ENST00000449476 GPKOWQ92917 476 aaPredicted RBP eCLIP11.59□□□□□ -0.55
CTC1-202ENST00000449476 PPP2R2CQ9Y2T4 447 aa11.59□□□□□ -0.55
CTC1-202ENST00000449476 HEG1Q9ULI3 1381 aa11.59□□□□□ -0.55
CTC1-202ENST00000449476 KIF23Q02241 960 aaPredicted RBP11.59□□□□□ -0.55
CTC1-202ENST00000449476 NBPF14Q5TI25 921 aa11.59□□□□□ -0.55
CTC1-202ENST00000449476 RRAGAQ7L523 313 aa11.59□□□□□ -0.55
CTC1-202ENST00000449476 CPLX4Q7Z7G2 160 aa11.59□□□□□ -0.55
CTC1-202ENST00000449476 OTUD6BQ8N6M0 293 aa11.59□□□□□ -0.55
CTC1-202ENST00000449476 UBLCP1Q8WVY7 318 aaPredicted RBP11.59□□□□□ -0.55
CTC1-202ENST00000449476 PPP6R2O75170 966 aa11.59□□□□□ -0.55
CTC1-202ENST00000449476 GOLGA8HP0CJ92 632 aa11.59□□□□□ -0.55
CTC1-202ENST00000449476 EPHA10Q5JZY3 1008 aa11.59□□□□□ -0.55
CTC1-202ENST00000449476 PNPLA6Q8IY17 1366 aa11.59□□□□□ -0.55
CTC1-202ENST00000449476 ANKARQ7Z5J8 1434 aa11.58□□□□□ -0.55
CTC1-202ENST00000449476 RNF17Q9BXT8 1623 aaKnown RBP11.58□□□□□ -0.56
CTC1-202ENST00000449476 GTPBP6O43824 516 aaPredicted RBP11.58□□□□□ -0.56
CTC1-202ENST00000449476 DDAH1O94760 285 aa11.58□□□□□ -0.56
CTC1-202ENST00000449476 TECP42680 631 aa11.58□□□□□ -0.56
CTC1-202ENST00000449476 CRKLP46109 303 aaKnown RBP11.58□□□□□ -0.56
CTC1-202ENST00000449476 GABPB1Q06547 395 aaPredicted RBP11.58□□□□□ -0.56
CTC1-202ENST00000449476 RESTQ13127 1097 aa11.58□□□□□ -0.56
CTC1-202ENST00000449476 PPP1R7Q15435 360 aa11.58□□□□□ -0.56
CTC1-202ENST00000449476 TYW1BQ6NUM6 668 aa11.58□□□□□ -0.56
CTC1-202ENST00000449476 NLRP10Q86W26 655 aa11.58□□□□□ -0.56
CTC1-202ENST00000449476 C2CD5Q86YS7 1000 aa11.58□□□□□ -0.56
CTC1-202ENST00000449476 MICALL1Q8N3F8 863 aa11.58□□□□□ -0.56
CTC1-202ENST00000449476 CACTINQ8WUQ7 758 aaKnown RBP11.58□□□□□ -0.56
CTC1-202ENST00000449476 SYMPKQ92797 1274 aaKnown RBP11.58□□□□□ -0.56
CTC1-202ENST00000449476 RNF26Q9BY78 433 aaPredicted RBP11.58□□□□□ -0.56
CTC1-202ENST00000449476 SEC31BQ9NQW1 1179 aa11.58□□□□□ -0.56
CTC1-202ENST00000449476 CCDC169A6NNP5 214 aa11.58□□□□□ -0.56
CTC1-202ENST00000449476 SPOPO43791 374 aa11.58□□□□□ -0.56
CTC1-202ENST00000449476 CFBP00751 764 aa11.58□□□□□ -0.56
CTC1-202ENST00000449476 IFIH1Q9BYX4 1025 aaKnown RBP11.58□□□□□ -0.56
CTC1-202ENST00000449476 NT5C3AQ9H0P0 336 aa11.58□□□□□ -0.56
CTC1-202ENST00000449476 FOXP1Q9H334 677 aaPredicted RBP11.58□□□□□ -0.56
CTC1-202ENST00000449476 B4DLN1 442 aa11.58□□□□□ -0.56
CTC1-202ENST00000449476 H7C1D1 291 aa11.58□□□□□ -0.56
CTC1-202ENST00000449476 PCP11498 1178 aaKnown RBP11.58□□□□□ -0.56
CTC1-202ENST00000449476 BIRC3Q13489 604 aa11.58□□□□□ -0.56
CTC1-202ENST00000449476 SEL1L2Q5TEA6 688 aa11.58□□□□□ -0.56
CTC1-202ENST00000449476 ATP8A2Q9NTI2 1148 aa11.58□□□□□ -0.56
CTC1-202ENST00000449476 USP40Q9NVE5 1235 aa11.58□□□□□ -0.56
CTC1-202ENST00000449476 DNM2P50570 870 aa11.58□□□□□ -0.56
CTC1-202ENST00000449476 PPP1R14CQ8TAE6 165 aa11.58□□□□□ -0.56
CTC1-202ENST00000449476 AFAP1L1Q8TED9 768 aa11.58□□□□□ -0.56
CTC1-202ENST00000449476 NAP1L3Q99457 506 aaPredicted RBP11.58□□□□□ -0.56
CTC1-202ENST00000449476 IQCGQ9H095 443 aaKnown RBP11.58□□□□□ -0.56
CTC1-202ENST00000449476 GLI2P10070 1586 aa11.57□□□□□ -0.56
CTC1-202ENST00000449476 A2ML1A8K2U0 1454 aa11.57□□□□□ -0.56
CTC1-202ENST00000449476 NPHP4O75161 1426 aaPredicted RBP11.57□□□□□ -0.56
CTC1-202ENST00000449476 H7C1W4 665 aa11.57□□□□□ -0.56
CTC1-202ENST00000449476 OR52Z1P0C646 297 aa11.57□□□□□ -0.56
CTC1-202ENST00000449476 MAEAQ7L5Y9 396 aa11.57□□□□□ -0.56
CTC1-202ENST00000449476 NEK8Q86SG6 692 aa11.57□□□□□ -0.56
CTC1-202ENST00000449476 GPR161Q8N6U8 529 aaKnown RBP11.57□□□□□ -0.56
CTC1-202ENST00000449476 FNBP1Q96RU3 617 aa11.57□□□□□ -0.56
CTC1-202ENST00000449476 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.57□□□□□ -0.56
CTC1-202ENST00000449476 CSRNP2Q9H175 543 aa11.57□□□□□ -0.56
CTC1-202ENST00000449476 CEP83Q9Y592 693 aa11.57□□□□□ -0.56
CTC1-202ENST00000449476 SAR1BQ9Y6B6 198 aa11.57□□□□□ -0.56
CTC1-202ENST00000449476 PSDA5PKW4 1024 aaPredicted RBP11.57□□□□□ -0.56
CTC1-202ENST00000449476 CEP104O60308 925 aa11.57□□□□□ -0.56
CTC1-202ENST00000449476 SMTNP53814 917 aa11.57□□□□□ -0.56
CTC1-202ENST00000449476 SFMBT2Q5VUG0 894 aa11.57□□□□□ -0.56
CTC1-202ENST00000449476 CCDC121Q6ZUS5 278 aa11.57□□□□□ -0.56
CTC1-202ENST00000449476 MYCT1Q8N699 235 aa11.57□□□□□ -0.56
CTC1-202ENST00000449476 ANKS4BQ8N8V4 417 aa11.57□□□□□ -0.56
CTC1-202ENST00000449476 KIAA1524Q8TCG1 905 aa11.57□□□□□ -0.56
CTC1-202ENST00000449476 ARAP3Q8WWN8 1544 aa11.57□□□□□ -0.56
CTC1-202ENST00000449476 PRKAB2O43741 272 aa11.57□□□□□ -0.56
CTC1-202ENST00000449476 GCNT3O95395 438 aa11.57□□□□□ -0.56
CTC1-202ENST00000449476 FMNL1O95466 1100 aaPredicted RBP11.57□□□□□ -0.56
CTC1-202ENST00000449476 USPL1Q5W0Q7 1092 aa11.57□□□□□ -0.56
CTC1-202ENST00000449476 DPH6Q7L8W6 267 aa11.57□□□□□ -0.56
CTC1-202ENST00000449476 IFT20Q8IY31 132 aa11.57□□□□□ -0.56
CTC1-202ENST00000449476 STK24Q9Y6E0 443 aa11.57□□□□□ -0.56
CTC1-202ENST00000449476 EXOC3O60645 756 aa11.56□□□□□ -0.56
CTC1-202ENST00000449476 KRT5P13647 590 aa11.56□□□□□ -0.56
CTC1-202ENST00000449476 CPXCR1Q8N123 301 aa11.56□□□□□ -0.56
CTC1-202ENST00000449476 MRPL44Q9H9J2 332 aaKnown RBP11.56□□□□□ -0.56
CTC1-202ENST00000449476 PCDHA12Q9UN75 941 aa11.56□□□□□ -0.56
CTC1-202ENST00000449476 ZNF804BA4D1E1 1349 aa11.56□□□□□ -0.56
CTC1-202ENST00000449476 STX10O60499 249 aa11.56□□□□□ -0.56
CTC1-202ENST00000449476 FLOT1O75955 427 aa11.56□□□□□ -0.56
CTC1-202ENST00000449476 IFNAR1P17181 557 aa11.56□□□□□ -0.56
CTC1-202ENST00000449476 GSDMAQ96QA5 445 aa11.56□□□□□ -0.56
CTC1-202ENST00000449476 NUCKS1Q9H1E3 243 aaKnown RBP11.56□□□□□ -0.56
CTC1-202ENST00000449476 GPHNQ9NQX3 736 aaPredicted RBP11.56□□□□□ -0.56
CTC1-202ENST00000449476 ZSWIM5Q9P217 1185 aa11.56□□□□□ -0.56
CTC1-202ENST00000449476 MADDQ8WXG6 1647 aa11.56□□□□□ -0.56
CTC1-202ENST00000449476 SPHKAPQ2M3C7 1700 aa11.56□□□□□ -0.56
CTC1-202ENST00000449476 CYP27B1O15528 508 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms