RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 RXRAP19793 462 aa14.85□□□□□ -0.03
HLA-DRB9-201ENST00000449413 CCT2P78371 535 aaKnown RBP14.85□□□□□ -0.03
HLA-DRB9-201ENST00000449413 PKN2Q16513 984 aaKnown RBP14.85□□□□□ -0.03
HLA-DRB9-201ENST00000449413 CERKLQ49MI3 558 aaPredicted RBP14.85□□□□□ -0.03
HLA-DRB9-201ENST00000449413 CATIPQ7Z7H3 387 aa14.85□□□□□ -0.03
HLA-DRB9-201ENST00000449413 USP48Q86UV5 1035 aa14.85□□□□□ -0.03
HLA-DRB9-201ENST00000449413 NSUN7Q8NE18 718 aaKnown RBP14.85□□□□□ -0.03
HLA-DRB9-201ENST00000449413 ANKS1AQ92625 1134 aa14.85□□□□□ -0.03
HLA-DRB9-201ENST00000449413 CHMP4CQ96CF2 233 aa14.85□□□□□ -0.03
HLA-DRB9-201ENST00000449413 LLPHQ9BRT6 129 aaKnown RBP14.85□□□□□ -0.03
HLA-DRB9-201ENST00000449413 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.85□□□□□ -0.03
HLA-DRB9-201ENST00000449413 KAT14Q9H8E8 782 aa14.85□□□□□ -0.03
HLA-DRB9-201ENST00000449413 GBA2Q9HCG7 927 aaPredicted RBP14.85□□□□□ -0.03
HLA-DRB9-201ENST00000449413 CWC22Q9HCG8 908 aaKnown RBP14.85□□□□□ -0.03
HLA-DRB9-201ENST00000449413 CIZ1Q9ULV3 898 aaPredicted RBP14.85□□□□□ -0.03
HLA-DRB9-201ENST00000449413 STX8Q9UNK0 236 aa14.85□□□□□ -0.03
HLA-DRB9-201ENST00000449413 PHIPQ8WWQ0 1821 aa14.85□□□□□ -0.03
HLA-DRB9-201ENST00000449413 PTPDC1A2A3K4 754 aa14.84□□□□□ -0.03
HLA-DRB9-201ENST00000449413 TBC1D12O60347 775 aa14.84□□□□□ -0.03
HLA-DRB9-201ENST00000449413 GDF11O95390 407 aa14.84□□□□□ -0.03
HLA-DRB9-201ENST00000449413 CALM1P0DP23 149 aa14.84□□□□□ -0.03
HLA-DRB9-201ENST00000449413 CALM2P0DP24 149 aa14.84□□□□□ -0.03
HLA-DRB9-201ENST00000449413 CALM3P0DP25 149 aa14.84□□□□□ -0.03
HLA-DRB9-201ENST00000449413 GJB2P29033 226 aa14.84□□□□□ -0.03
HLA-DRB9-201ENST00000449413 NOVP48745 357 aa14.84□□□□□ -0.03
HLA-DRB9-201ENST00000449413 RTN1Q16799 776 aa14.84□□□□□ -0.03
HLA-DRB9-201ENST00000449413 PPP4R3BQ5MIZ7 849 aa14.84□□□□□ -0.03
HLA-DRB9-201ENST00000449413 TMEM179Q6ZVK1 233 aa14.84□□□□□ -0.03
HLA-DRB9-201ENST00000449413 CLEC10AQ8IUN9 316 aa14.84□□□□□ -0.03
HLA-DRB9-201ENST00000449413 C2orf69Q8N8R5 385 aa14.84□□□□□ -0.03
HLA-DRB9-201ENST00000449413 DEFB129Q9H1M3 183 aa14.84□□□□□ -0.03
HLA-DRB9-201ENST00000449413 CPLX1O14810 134 aa14.83□□□□□ -0.04
HLA-DRB9-201ENST00000449413 DHX16O60231 1041 aaKnown RBP14.83□□□□□ -0.04
HLA-DRB9-201ENST00000449413 JAK2O60674 1132 aa14.83□□□□□ -0.04
HLA-DRB9-201ENST00000449413 CTDNEP1O95476 244 aa14.83□□□□□ -0.04
HLA-DRB9-201ENST00000449413 ZNF157P51786 506 aaPredicted RBP14.83□□□□□ -0.04
HLA-DRB9-201ENST00000449413 ABCB5Q2M3G0 1257 aa14.83□□□□□ -0.04
HLA-DRB9-201ENST00000449413 SHROOM1Q2M3G4 852 aaPredicted RBP14.83□□□□□ -0.04
HLA-DRB9-201ENST00000449413 CCDC144CPQ8IYA2 1237 aa14.83□□□□□ -0.04
HLA-DRB9-201ENST00000449413 PNMA1Q8ND90 353 aa14.83□□□□□ -0.04
HLA-DRB9-201ENST00000449413 SMARCC2Q8TAQ2 1214 aa14.83□□□□□ -0.04
HLA-DRB9-201ENST00000449413 NUP133Q8WUM0 1156 aa14.83□□□□□ -0.04
HLA-DRB9-201ENST00000449413 MTMR4Q9NYA4 1195 aa14.83□□□□□ -0.04
HLA-DRB9-201ENST00000449413 CHMP5Q9NZZ3 219 aa14.83□□□□□ -0.04
HLA-DRB9-201ENST00000449413 MKI67P46013 3256 aaKnown RBP14.83□□□□□ -0.04
HLA-DRB9-201ENST00000449413 CDKL5O76039 1030 aa14.82□□□□□ -0.04
HLA-DRB9-201ENST00000449413 TTLL1O95922 423 aa14.82□□□□□ -0.04
HLA-DRB9-201ENST00000449413 TOP1P11387 765 aaKnown RBP14.82□□□□□ -0.04
HLA-DRB9-201ENST00000449413 CDC27P30260 824 aa14.82□□□□□ -0.04
HLA-DRB9-201ENST00000449413 HMGN5P82970 282 aaKnown RBP14.82□□□□□ -0.04
HLA-DRB9-201ENST00000449413 MAP3K10Q02779 954 aa14.82□□□□□ -0.04
HLA-DRB9-201ENST00000449413 ICA1Q05084 483 aa14.82□□□□□ -0.04
HLA-DRB9-201ENST00000449413 TROAPQ12815 778 aa14.82□□□□□ -0.04
HLA-DRB9-201ENST00000449413 RRP1BQ14684 758 aaKnown RBP14.82□□□□□ -0.04
HLA-DRB9-201ENST00000449413 KRT26Q7Z3Y9 468 aa14.82□□□□□ -0.04
HLA-DRB9-201ENST00000449413 REM2Q8IYK8 340 aaPredicted RBP14.82□□□□□ -0.04
HLA-DRB9-201ENST00000449413 HOOK2Q96ED9 719 aa14.82□□□□□ -0.04
HLA-DRB9-201ENST00000449413 TMEM47Q9BQJ4 181 aa14.82□□□□□ -0.04
HLA-DRB9-201ENST00000449413 RBM28Q9NW13 759 aaKnown RBP14.82□□□□□ -0.04
HLA-DRB9-201ENST00000449413 ZBTB21Q9ULJ3 1066 aa14.82□□□□□ -0.04
HLA-DRB9-201ENST00000449413 GH2P01242 217 aa14.81□□□□□ -0.04
HLA-DRB9-201ENST00000449413 SLC10A3P09131 477 aa14.81□□□□□ -0.04
HLA-DRB9-201ENST00000449413 HABP4Q5JVS0 413 aaKnown RBP14.81□□□□□ -0.04
HLA-DRB9-201ENST00000449413 NBPF12Q5TAG4 269 aaPredicted RBP14.81□□□□□ -0.04
HLA-DRB9-201ENST00000449413 DCAF15Q66K64 600 aa14.81□□□□□ -0.04
HLA-DRB9-201ENST00000449413 CPLX2Q6PUV4 134 aaKnown RBP14.81□□□□□ -0.04
HLA-DRB9-201ENST00000449413 MIGA2Q7L4E1 593 aa14.81□□□□□ -0.04
HLA-DRB9-201ENST00000449413 LRRC47Q8N1G4 583 aaKnown RBP14.81□□□□□ -0.04
HLA-DRB9-201ENST00000449413 CTCFLQ8NI51 663 aaPredicted RBP14.81□□□□□ -0.04
HLA-DRB9-201ENST00000449413 DCPSQ96C86 337 aaKnown RBP14.81□□□□□ -0.04
HLA-DRB9-201ENST00000449413 CABP5Q9NP86 173 aa14.81□□□□□ -0.04
HLA-DRB9-201ENST00000449413 STK36Q9NRP7 1315 aa14.81□□□□□ -0.04
HLA-DRB9-201ENST00000449413 CCDC196A0A1B0GTZ2 297 aa14.8□□□□□ -0.04
HLA-DRB9-201ENST00000449413 ADM5C9JUS6 153 aa14.8□□□□□ -0.04
HLA-DRB9-201ENST00000449413 DTNBO60941 627 aa14.8□□□□□ -0.04
HLA-DRB9-201ENST00000449413 GUCY1A2P33402 732 aa14.8□□□□□ -0.04
HLA-DRB9-201ENST00000449413 GRM4Q14833 912 aa14.8□□□□□ -0.04
HLA-DRB9-201ENST00000449413 SEPT2Q15019 361 aa14.8□□□□□ -0.04
HLA-DRB9-201ENST00000449413 PPP2R5BQ15173 497 aa14.8□□□□□ -0.04
HLA-DRB9-201ENST00000449413 DLK2Q6UY11 383 aa14.8□□□□□ -0.04
HLA-DRB9-201ENST00000449413 SULF1Q8IWU6 871 aa14.8□□□□□ -0.04
HLA-DRB9-201ENST00000449413 FANCBQ8NB91 859 aa14.8□□□□□ -0.04
HLA-DRB9-201ENST00000449413 MAP3K14Q99558 947 aa14.8□□□□□ -0.04
HLA-DRB9-201ENST00000449413 KANSL2Q9H9L4 492 aa14.8□□□□□ -0.04
HLA-DRB9-201ENST00000449413 FAM217BQ9NTX9 383 aaPredicted RBP14.8□□□□□ -0.04
HLA-DRB9-201ENST00000449413 KIF3AQ9Y496 699 aa14.8□□□□□ -0.04
HLA-DRB9-201ENST00000449413 PTPRFP10586 1907 aa14.8□□□□□ -0.04
HLA-DRB9-201ENST00000449413 KIF5BP33176 963 aa14.79□□□□□ -0.04
HLA-DRB9-201ENST00000449413 ADD1P35611 737 aaKnown RBP14.79□□□□□ -0.04
HLA-DRB9-201ENST00000449413 CAP2P40123 477 aa14.79□□□□□ -0.04
HLA-DRB9-201ENST00000449413 JAG1P78504 1218 aa14.79□□□□□ -0.04
HLA-DRB9-201ENST00000449413 RAB3GAP1Q15042 981 aa14.79□□□□□ -0.04
HLA-DRB9-201ENST00000449413 NTRK3Q16288 839 aa14.79□□□□□ -0.04
HLA-DRB9-201ENST00000449413 PARP14Q460N5 1801 aa14.79□□□□□ -0.04
HLA-DRB9-201ENST00000449413 TMTC3Q6ZXV5 915 aa14.79□□□□□ -0.04
HLA-DRB9-201ENST00000449413 RASGRP2Q7LDG7 609 aa14.79□□□□□ -0.04
HLA-DRB9-201ENST00000449413 CNTNAP5Q8WYK1 1306 aa14.79□□□□□ -0.04
HLA-DRB9-201ENST00000449413 DDX11Q96FC9 970 aa14.79□□□□□ -0.04
HLA-DRB9-201ENST00000449413 ZNF341Q9BYN7 854 aa14.79□□□□□ -0.04
HLA-DRB9-201ENST00000449413 NYAP2Q9P242 653 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms