RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 GNAQP50148 359 aa20.4■□□□□ 0.86
LMNA-208ENST00000448611 NDUFA8P51970 172 aa20.4■□□□□ 0.86
LMNA-208ENST00000448611 CCDC93Q567U6 631 aa20.4■□□□□ 0.86
LMNA-208ENST00000448611 JMYQ8N9B5 988 aa20.4■□□□□ 0.86
LMNA-208ENST00000448611 CEP95Q96GE4 821 aa20.4■□□□□ 0.86
LMNA-208ENST00000448611 PDLIM2Q96JY6 352 aa20.4■□□□□ 0.86
LMNA-208ENST00000448611 SERPINB13Q9UIV8 391 aa20.4■□□□□ 0.86
LMNA-208ENST00000448611 MRVI1Q9Y6F6 885 aa20.4■□□□□ 0.86
LMNA-208ENST00000448611 PALM3A6NDB9 673 aaPredicted RBP20.39■□□□□ 0.86
LMNA-208ENST00000448611 KINO60870 393 aaKnown RBP20.39■□□□□ 0.86
LMNA-208ENST00000448611 KRT2P35908 639 aa20.39■□□□□ 0.86
LMNA-208ENST00000448611 RTKN2Q8IZC4 609 aa20.39■□□□□ 0.86
LMNA-208ENST00000448611 SERPINA10Q9UK55 444 aa20.39■□□□□ 0.86
LMNA-208ENST00000448611 MYO3BQ8WXR4 1341 aa20.39■□□□□ 0.85
LMNA-208ENST00000448611 SLC35G1Q2M3R5 365 aa20.39■□□□□ 0.85
LMNA-208ENST00000448611 TNFRSF25Q93038 417 aa20.39■□□□□ 0.85
LMNA-208ENST00000448611 PSMD1Q99460 953 aa20.39■□□□□ 0.85
LMNA-208ENST00000448611 FHDC1Q9C0D6 1143 aaPredicted RBP20.39■□□□□ 0.85
LMNA-208ENST00000448611 SWAP70Q9UH65 585 aa20.39■□□□□ 0.85
LMNA-208ENST00000448611 TOP1P11387 765 aaKnown RBP20.38■□□□□ 0.85
LMNA-208ENST00000448611 VEGFAP15692 232 aaPredicted RBP20.38■□□□□ 0.85
LMNA-208ENST00000448611 IDI2Q9BXS1 227 aa20.38■□□□□ 0.85
LMNA-208ENST00000448611 IGKV6D-41A0A0C4DH26 115 aa20.37■□□□□ 0.85
LMNA-208ENST00000448611 CABP5Q9NP86 173 aa20.37■□□□□ 0.85
LMNA-208ENST00000448611 HLA-DOAP06340 250 aa20.37■□□□□ 0.85
LMNA-208ENST00000448611 AKR1B1P15121 316 aa20.37■□□□□ 0.85
LMNA-208ENST00000448611 SHMT1P34896 483 aa20.37■□□□□ 0.85
LMNA-208ENST00000448611 EARS2Q5JPH6 523 aaKnown RBP20.37■□□□□ 0.85
LMNA-208ENST00000448611 ZFPM1Q8IX07 1006 aa20.37■□□□□ 0.85
LMNA-208ENST00000448611 EHD4Q9H223 541 aa20.37■□□□□ 0.85
LMNA-208ENST00000448611 BRMS1Q9HCU9 246 aa20.37■□□□□ 0.85
LMNA-208ENST00000448611 FAM237AA0A1B0GTK4 181 aa20.36■□□□□ 0.85
LMNA-208ENST00000448611 FAM205CA6NFA0 338 aa20.36■□□□□ 0.85
LMNA-208ENST00000448611 CYTH3O43739 400 aa20.36■□□□□ 0.85
LMNA-208ENST00000448611 CUTAO60888 179 aa20.36■□□□□ 0.85
LMNA-208ENST00000448611 PFKFB1P16118 471 aa20.36■□□□□ 0.85
LMNA-208ENST00000448611 RBM5P52756 815 aaKnown RBP eCLIP20.36■□□□□ 0.85
LMNA-208ENST00000448611 SHC4Q6S5L8 630 aa20.36■□□□□ 0.85
LMNA-208ENST00000448611 SASS6Q6UVJ0 657 aa20.36■□□□□ 0.85
LMNA-208ENST00000448611 NLGN2Q8NFZ4 835 aa20.36■□□□□ 0.85
LMNA-208ENST00000448611 LZTS2Q9BRK4 669 aa20.36■□□□□ 0.85
LMNA-208ENST00000448611 MTMR4Q9NYA4 1195 aa20.36■□□□□ 0.85
LMNA-208ENST00000448611 HPSEQ9Y251 543 aa20.36■□□□□ 0.85
LMNA-208ENST00000448611 PCDHB6Q9Y5E3 794 aa20.36■□□□□ 0.85
LMNA-208ENST00000448611 NPM3O75607 178 aaKnown RBP20.35■□□□□ 0.85
LMNA-208ENST00000448611 CACNB3P54284 484 aa20.35■□□□□ 0.85
LMNA-208ENST00000448611 RASGRP2Q7LDG7 609 aa20.35■□□□□ 0.85
LMNA-208ENST00000448611 PIBF1Q8WXW3 757 aa20.35■□□□□ 0.85
LMNA-208ENST00000448611 SH3GLB2Q9NR46 395 aa20.35■□□□□ 0.85
LMNA-208ENST00000448611 FAM198AQ9UFP1 575 aa20.35■□□□□ 0.85
LMNA-208ENST00000448611 PSME4Q14997 1843 aa20.35■□□□□ 0.85
LMNA-208ENST00000448611 KRI1Q8N9T8 703 aaKnown RBP20.35■□□□□ 0.85
LMNA-208ENST00000448611 FAM200AQ8TCP9 573 aa20.35■□□□□ 0.85
LMNA-208ENST00000448611 CLIC6Q96NY7 704 aa20.35■□□□□ 0.85
LMNA-208ENST00000448611 DHX36Q9H2U1 1008 aaKnown RBP20.35■□□□□ 0.85
LMNA-208ENST00000448611 PIM2Q9P1W9 311 aa20.35■□□□□ 0.85
LMNA-208ENST00000448611 MTMR7Q9Y216 660 aa20.35■□□□□ 0.85
LMNA-208ENST00000448611 KLRF2D3W0D1 207 aa20.34■□□□□ 0.85
LMNA-208ENST00000448611 ZNF202O95125 648 aa20.34■□□□□ 0.85
LMNA-208ENST00000448611 GOLGA8HP0CJ92 632 aa20.34■□□□□ 0.85
LMNA-208ENST00000448611 NLRP5P59047 1200 aa20.34■□□□□ 0.85
LMNA-208ENST00000448611 ANO6Q4KMQ2 910 aa20.34■□□□□ 0.85
LMNA-208ENST00000448611 RESP18Q5W5W9 173 aa20.34■□□□□ 0.85
LMNA-208ENST00000448611 SPZ1Q9BXG8 430 aa20.34■□□□□ 0.85
LMNA-208ENST00000448611 MORC2Q9Y6X9 1032 aaPredicted RBP20.34■□□□□ 0.85
LMNA-208ENST00000448611 BAZ2BQ9UIF8 2168 aaKnown RBP20.34■□□□□ 0.85
LMNA-208ENST00000448611 PARP1P09874 1014 aaKnown RBP20.33■□□□□ 0.85
LMNA-208ENST00000448611 SYT17Q9BSW7 474 aa20.33■□□□□ 0.85
LMNA-208ENST00000448611 DNAJC18Q9H819 358 aa20.33■□□□□ 0.85
LMNA-208ENST00000448611 FBXO2Q9UK22 296 aaPredicted RBP20.33■□□□□ 0.85
LMNA-208ENST00000448611 MYH8P13535 1937 aa20.33■□□□□ 0.85
LMNA-208ENST00000448611 COL4A5P29400 1685 aa20.33■□□□□ 0.85
LMNA-208ENST00000448611 UTRNP46939 3433 aa20.33■□□□□ 0.84
LMNA-208ENST00000448611 SIPA1L1O43166 1804 aa20.33■□□□□ 0.84
LMNA-208ENST00000448611 PTPREP23469 700 aa20.33■□□□□ 0.84
LMNA-208ENST00000448611 TCP10Q12799 353 aa20.33■□□□□ 0.84
LMNA-208ENST00000448611 NOM1Q5C9Z4 860 aaKnown RBP20.33■□□□□ 0.84
LMNA-208ENST00000448611 USP17L2Q6R6M4 530 aa20.33■□□□□ 0.84
LMNA-208ENST00000448611 GPKOWQ92917 476 aaPredicted RBP eCLIP20.33■□□□□ 0.841e-9■■■■□ 23.2
LMNA-208ENST00000448611 CEP131Q9UPN4 1083 aa20.33■□□□□ 0.84
LMNA-208ENST00000448611 DDTLA6NHG4 134 aaPredicted RBP20.32■□□□□ 0.84
LMNA-208ENST00000448611 SMARCA1P28370 1054 aa20.32■□□□□ 0.84
LMNA-208ENST00000448611 CFAP100Q494V2 611 aa20.32■□□□□ 0.84
LMNA-208ENST00000448611 SH3BP5LQ7L8J4 393 aa20.32■□□□□ 0.84
LMNA-208ENST00000448611 TRIM44Q96DX7 344 aaPredicted RBP20.32■□□□□ 0.84
LMNA-208ENST00000448611 SDF4Q9BRK5 362 aa20.32■□□□□ 0.84
LMNA-208ENST00000448611 ZNF277Q9NRM2 450 aaPredicted RBP20.32■□□□□ 0.84
LMNA-208ENST00000448611 GREB1LQ9C091 1923 aaPredicted RBP20.32■□□□□ 0.84
LMNA-208ENST00000448611 TRIM75PA6NK02 468 aa20.31■□□□□ 0.84
LMNA-208ENST00000448611 ADAMTS3O15072 1205 aa20.31■□□□□ 0.84
LMNA-208ENST00000448611 ATP2B1P20020 1258 aa20.31■□□□□ 0.84
LMNA-208ENST00000448611 CALML3P27482 149 aa20.31■□□□□ 0.84
LMNA-208ENST00000448611 WWC2Q6AWC2 1192 aa20.31■□□□□ 0.84
LMNA-208ENST00000448611 TYW1BQ6NUM6 668 aa20.31■□□□□ 0.84
LMNA-208ENST00000448611 RSBN1LQ6PCB5 846 aaPredicted RBP20.31■□□□□ 0.84
LMNA-208ENST00000448611 LARGE2Q8N3Y3 721 aa20.31■□□□□ 0.84
LMNA-208ENST00000448611 TIGD1Q96MW7 591 aa20.31■□□□□ 0.84
LMNA-208ENST00000448611 VPS33BQ9H267 617 aa20.31■□□□□ 0.84
LMNA-208ENST00000448611 USP17L5A8MUK1 530 aa20.31■□□□□ 0.84
LMNA-208ENST00000448611 TTLL1O95922 423 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms