RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 HOXC10Q9NYD6 342 aa18.77■□□□□ 0.6
TRA2A-203ENST00000448549 MBD4O95243 580 aa18.76■□□□□ 0.59
TRA2A-203ENST00000448549 ATP5JP18859 108 aa18.76■□□□□ 0.59
TRA2A-203ENST00000448549 CYP2C19P33261 490 aa18.76■□□□□ 0.59
TRA2A-203ENST00000448549 ADD2P35612 726 aa18.76■□□□□ 0.59
TRA2A-203ENST00000448549 LRRC26Q2I0M4 334 aa18.76■□□□□ 0.59
TRA2A-203ENST00000448549 KIAA1755Q5JYT7 1200 aa18.76■□□□□ 0.59
TRA2A-203ENST00000448549 TMEM179Q6ZVK1 233 aa18.76■□□□□ 0.59
TRA2A-203ENST00000448549 MOV10L1Q9BXT6 1211 aaKnown RBP18.76■□□□□ 0.59
TRA2A-203ENST00000448549 SWAP70Q9UH65 585 aa18.76■□□□□ 0.59
TRA2A-203ENST00000448549 MYH1P12882 1939 aa18.76■□□□□ 0.59
TRA2A-203ENST00000448549 SMIM22K7EJ46 135 aa18.75■□□□□ 0.59
TRA2A-203ENST00000448549 CHGBP05060 677 aa18.75■□□□□ 0.59
TRA2A-203ENST00000448549 CNGA1P29973 690 aa18.75■□□□□ 0.59
TRA2A-203ENST00000448549 CLEC10AQ8IUN9 316 aa18.75■□□□□ 0.59
TRA2A-203ENST00000448549 SIAH1Q8IUQ4 282 aa18.75■□□□□ 0.59
TRA2A-203ENST00000448549 ATP8A2Q9NTI2 1148 aa18.75■□□□□ 0.59
TRA2A-203ENST00000448549 DDX20Q9UHI6 824 aaKnown RBP18.75■□□□□ 0.59
TRA2A-203ENST00000448549 DDX60LQ5H9U9 1706 aaKnown RBP18.74■□□□□ 0.59
TRA2A-203ENST00000448549 CYP2D7A0A087X1C5 515 aa18.74■□□□□ 0.59
TRA2A-203ENST00000448549 AKR1B1P15121 316 aa18.74■□□□□ 0.59
TRA2A-203ENST00000448549 DPP9Q86TI2 863 aa18.74■□□□□ 0.59
TRA2A-203ENST00000448549 SPICE1Q8N0Z3 855 aa18.74■□□□□ 0.59
TRA2A-203ENST00000448549 HAUS7Q99871 368 aa18.74■□□□□ 0.59
TRA2A-203ENST00000448549 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.74■□□□□ 0.59
TRA2A-203ENST00000448549 SPATC1LQ9H0A9 340 aa18.74■□□□□ 0.59
TRA2A-203ENST00000448549 ERCC3P19447 782 aa18.73■□□□□ 0.59
TRA2A-203ENST00000448549 ADORA2AP29274 412 aa18.73■□□□□ 0.59
TRA2A-203ENST00000448549 C12orf60Q5U649 245 aa18.73■□□□□ 0.59
TRA2A-203ENST00000448549 TRPV1Q8NER1 839 aa18.73■□□□□ 0.59
TRA2A-203ENST00000448549 UBE2OQ9C0C9 1292 aaKnown RBP18.73■□□□□ 0.59
TRA2A-203ENST00000448549 SENP6Q9GZR1 1112 aaPredicted RBP18.73■□□□□ 0.59
TRA2A-203ENST00000448549 TMX2Q9Y320 296 aa18.73■□□□□ 0.59
TRA2A-203ENST00000448549 ALPK3Q96L96 1907 aa18.72■□□□□ 0.59
TRA2A-203ENST00000448549 USP17L12C9JPN9 530 aa18.72■□□□□ 0.59
TRA2A-203ENST00000448549 USP17L21D6R901 530 aa18.72■□□□□ 0.59
TRA2A-203ENST00000448549 STRNO43815 780 aa18.72■□□□□ 0.59
TRA2A-203ENST00000448549 FLOT1O75955 427 aa18.72■□□□□ 0.59
TRA2A-203ENST00000448549 IGHA2P01877 340 aa18.72■□□□□ 0.59
TRA2A-203ENST00000448549 DSG3P32926 999 aa18.72■□□□□ 0.59
TRA2A-203ENST00000448549 CDK8P49336 464 aa18.72■□□□□ 0.59
TRA2A-203ENST00000448549 ICA1Q05084 483 aa18.72■□□□□ 0.59
TRA2A-203ENST00000448549 PLS1Q14651 629 aa18.72■□□□□ 0.59
TRA2A-203ENST00000448549 TDHQ8IZJ6 230 aa18.72■□□□□ 0.59
TRA2A-203ENST00000448549 SHCBP1Q8NEM2 672 aa18.72■□□□□ 0.59
TRA2A-203ENST00000448549 LPAR1Q92633 364 aa18.72■□□□□ 0.59
TRA2A-203ENST00000448549 CHMP4BQ9H444 224 aaKnown RBP18.72■□□□□ 0.59
TRA2A-203ENST00000448549 ARHGEF10LQ9HCE6 1279 aa18.72■□□□□ 0.59
TRA2A-203ENST00000448549 MSCO60682 206 aa18.71■□□□□ 0.59
TRA2A-203ENST00000448549 UBE3CQ15386 1083 aa18.71■□□□□ 0.59
TRA2A-203ENST00000448549 SAMD1Q6SPF0 538 aaPredicted RBP18.71■□□□□ 0.59
TRA2A-203ENST00000448549 AMOTL1Q8IY63 956 aa18.71■□□□□ 0.59
TRA2A-203ENST00000448549 MB21D1Q8N884 522 aa18.71■□□□□ 0.59
TRA2A-203ENST00000448549 ATG4CQ96DT6 458 aa18.71■□□□□ 0.59
TRA2A-203ENST00000448549 CCDC17Q96LX7 622 aa18.71■□□□□ 0.59
TRA2A-203ENST00000448549 SH2D4AQ9H788 454 aa18.71■□□□□ 0.59
TRA2A-203ENST00000448549 VCPKMTQ9H867 229 aa18.71■□□□□ 0.59
TRA2A-203ENST00000448549 RCAN3Q9UKA8 241 aa18.71■□□□□ 0.59
TRA2A-203ENST00000448549 SLC4A4Q9Y6R1 1079 aa18.71■□□□□ 0.59
TRA2A-203ENST00000448549 LAMA3Q16787 3333 aa18.71■□□□□ 0.58
TRA2A-203ENST00000448549 COBLO75128 1261 aa18.7■□□□□ 0.58
TRA2A-203ENST00000448549 CYBAP13498 195 aa18.7■□□□□ 0.58
TRA2A-203ENST00000448549 MDM2Q00987 491 aaPredicted RBP18.7■□□□□ 0.58
TRA2A-203ENST00000448549 LRIT3Q3SXY7 679 aa18.7■□□□□ 0.58
TRA2A-203ENST00000448549 OLFML2BQ68BL8 750 aa18.7■□□□□ 0.58
TRA2A-203ENST00000448549 NCAPG2Q86XI2 1143 aa18.7■□□□□ 0.58
TRA2A-203ENST00000448549 DDRGK1Q96HY6 314 aa18.7■□□□□ 0.58
TRA2A-203ENST00000448549 LRRCC1Q9C099 1032 aa18.7■□□□□ 0.58
TRA2A-203ENST00000448549 MROH8Q9H579 483 aa18.7■□□□□ 0.58
TRA2A-203ENST00000448549 DNM1LO00429 736 aa18.69■□□□□ 0.58
TRA2A-203ENST00000448549 SMARCA5O60264 1052 aaPredicted RBP18.69■□□□□ 0.58
TRA2A-203ENST00000448549 EEF2P13639 858 aaKnown RBP18.69■□□□□ 0.58
TRA2A-203ENST00000448549 ATN1P54259 1190 aaPredicted RBP18.69■□□□□ 0.58
TRA2A-203ENST00000448549 C20orf194Q5TEA3 1177 aa18.69■□□□□ 0.58
TRA2A-203ENST00000448549 C16orf86Q6ZW13 317 aa18.69■□□□□ 0.58
TRA2A-203ENST00000448549 PUS7LQ9H0K6 701 aaKnown RBP18.69■□□□□ 0.58
TRA2A-203ENST00000448549 NAV1Q8NEY1 1877 aa18.69■□□□□ 0.58
TRA2A-203ENST00000448549 WDR46O15213 610 aaKnown RBP18.68■□□□□ 0.58
TRA2A-203ENST00000448549 PRAMEF19Q5SWL8 479 aa18.68■□□□□ 0.58
TRA2A-203ENST00000448549 GJC2Q5T442 439 aaPredicted RBP18.68■□□□□ 0.58
TRA2A-203ENST00000448549 ANO1Q5XXA6 986 aa18.68■□□□□ 0.58
TRA2A-203ENST00000448549 ZSCAN25Q6NSZ9 544 aa18.68■□□□□ 0.58
TRA2A-203ENST00000448549 GPR153Q6NV75 609 aa18.68■□□□□ 0.58
TRA2A-203ENST00000448549 CTR9Q6PD62 1173 aa18.68■□□□□ 0.58
TRA2A-203ENST00000448549 KANSL2Q9H9L4 492 aa18.68■□□□□ 0.58
TRA2A-203ENST00000448549 TMEM132BQ14DG7 1078 aa18.67■□□□□ 0.58
TRA2A-203ENST00000448549 Q7L0L9 218 aa18.67■□□□□ 0.58
TRA2A-203ENST00000448549 ABRAQ8N0Z2 381 aa18.67■□□□□ 0.58
TRA2A-203ENST00000448549 DEFB123Q8N688 67 aa18.67■□□□□ 0.58
TRA2A-203ENST00000448549 ARRDC4Q8NCT1 418 aa18.67■□□□□ 0.58
TRA2A-203ENST00000448549 FBXO28Q9NVF7 368 aa18.67■□□□□ 0.58
TRA2A-203ENST00000448549 SLC5A4Q9NY91 659 aa18.67■□□□□ 0.58
TRA2A-203ENST00000448549 SEPT4O43236 478 aa18.66■□□□□ 0.58
TRA2A-203ENST00000448549 FCER1AP12319 257 aa18.66■□□□□ 0.58
TRA2A-203ENST00000448549 SLC17A8Q8NDX2 589 aa18.66■□□□□ 0.58
TRA2A-203ENST00000448549 RAD21O60216 631 aa18.65■□□□□ 0.58
TRA2A-203ENST00000448549 MYCNP04198 464 aaPredicted RBP18.65■□□□□ 0.58
TRA2A-203ENST00000448549 RTP1P59025 263 aa18.65■□□□□ 0.58
TRA2A-203ENST00000448549 MAML3Q96JK9 1138 aa18.65■□□□□ 0.58
TRA2A-203ENST00000448549 STRBPQ96SI9 672 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms