RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 SP3Q02447 781 aa16.57■□□□□ 0.24
GTF3C3-206ENST00000448539 USP17L24Q0WX57 530 aa16.57■□□□□ 0.24
GTF3C3-206ENST00000448539 SIAH1Q8IUQ4 282 aa16.57■□□□□ 0.24
GTF3C3-206ENST00000448539 LPAR1Q92633 364 aa16.57■□□□□ 0.24
GTF3C3-206ENST00000448539 ESR2Q92731 530 aa16.57■□□□□ 0.24
GTF3C3-206ENST00000448539 CEP95Q96GE4 821 aa16.57■□□□□ 0.24
GTF3C3-206ENST00000448539 ASCC2Q9H1I8 757 aaPredicted RBP16.57■□□□□ 0.24
GTF3C3-206ENST00000448539 VCPKMTQ9H867 229 aa16.57■□□□□ 0.24
GTF3C3-206ENST00000448539 MTMR4Q9NYA4 1195 aa16.57■□□□□ 0.24
GTF3C3-206ENST00000448539 CPA4Q9UI42 421 aa16.57■□□□□ 0.24
GTF3C3-206ENST00000448539 IGKV6D-41A0A0C4DH26 115 aa16.56■□□□□ 0.24
GTF3C3-206ENST00000448539 TRDNQ13061 729 aa16.56■□□□□ 0.24
GTF3C3-206ENST00000448539 KIF22Q14807 665 aa16.56■□□□□ 0.24
GTF3C3-206ENST00000448539 MAP4K1Q92918 833 aa16.56■□□□□ 0.24
GTF3C3-206ENST00000448539 ERO1AQ96HE7 468 aa16.56■□□□□ 0.24
GTF3C3-206ENST00000448539 KRT23Q9C075 422 aa16.56■□□□□ 0.24
GTF3C3-206ENST00000448539 NBPF3Q9H094 633 aa16.56■□□□□ 0.24
GTF3C3-206ENST00000448539 CNNM2Q9H8M5 875 aa16.56■□□□□ 0.24
GTF3C3-206ENST00000448539 STX8Q9UNK0 236 aa16.56■□□□□ 0.24
GTF3C3-206ENST00000448539 RBM8AQ9Y5S9 174 aaKnown RBP16.56■□□□□ 0.24
GTF3C3-206ENST00000448539 TACC3Q9Y6A5 838 aa16.56■□□□□ 0.24
GTF3C3-206ENST00000448539 PTPRFP10586 1907 aa16.55■□□□□ 0.24
GTF3C3-206ENST00000448539 GCLCP48506 637 aaPredicted RBP16.55■□□□□ 0.24
GTF3C3-206ENST00000448539 ARHGEF6Q15052 776 aa16.55■□□□□ 0.24
GTF3C3-206ENST00000448539 SPICE1Q8N0Z3 855 aa16.55■□□□□ 0.24
GTF3C3-206ENST00000448539 TANGO6Q9C0B7 1094 aa16.55■□□□□ 0.24
GTF3C3-206ENST00000448539 LSG1Q9H089 658 aaKnown RBP16.55■□□□□ 0.24
GTF3C3-206ENST00000448539 RPAP3Q9H6T3 665 aaPredicted RBP16.55■□□□□ 0.24
GTF3C3-206ENST00000448539 LOC285556D6RIA3 1793 aa16.54■□□□□ 0.24
GTF3C3-206ENST00000448539 NEDD4P46934 1319 aa16.54■□□□□ 0.24
GTF3C3-206ENST00000448539 WDR46O15213 610 aaKnown RBP16.54■□□□□ 0.24
GTF3C3-206ENST00000448539 CYP21A2P08686 494 aa16.54■□□□□ 0.24
GTF3C3-206ENST00000448539 RGS19P49795 217 aa16.54■□□□□ 0.24
GTF3C3-206ENST00000448539 C17orf99Q6UX52 265 aa16.54■□□□□ 0.24
GTF3C3-206ENST00000448539 CATSPERGQ6ZRH7 1159 aa16.54■□□□□ 0.24
GTF3C3-206ENST00000448539 CTU1Q7Z7A3 348 aaKnown RBP16.54■□□□□ 0.24
GTF3C3-206ENST00000448539 IQCA1Q86XH1 822 aa16.54■□□□□ 0.24
GTF3C3-206ENST00000448539 GTF3C2Q8WUA4 911 aaPredicted RBP16.54■□□□□ 0.24
GTF3C3-206ENST00000448539 SYNPO2Q9UMS6 1093 aa16.54■□□□□ 0.24
GTF3C3-206ENST00000448539 B4E1Z4 1266 aa16.53■□□□□ 0.24
GTF3C3-206ENST00000448539 NMT2O60551 498 aa16.53■□□□□ 0.24
GTF3C3-206ENST00000448539 KDM4AO75164 1064 aa16.53■□□□□ 0.24
GTF3C3-206ENST00000448539 HERVK_113P62684 666 aa16.53■□□□□ 0.24
GTF3C3-206ENST00000448539 CCDC178Q5BJE1 867 aa16.53■□□□□ 0.24
GTF3C3-206ENST00000448539 LRRC47Q8N1G4 583 aaKnown RBP16.53■□□□□ 0.24
GTF3C3-206ENST00000448539 ANKRD13CQ8N6S4 541 aa16.53■□□□□ 0.24
GTF3C3-206ENST00000448539 MKL1Q969V6 931 aa16.53■□□□□ 0.24
GTF3C3-206ENST00000448539 P2RX7Q99572 595 aaKnown RBP16.53■□□□□ 0.24
GTF3C3-206ENST00000448539 TCP11L1Q9NUJ3 509 aa16.53■□□□□ 0.24
GTF3C3-206ENST00000448539 ADGRA2Q96PE1 1338 aa16.52■□□□□ 0.24
GTF3C3-206ENST00000448539 F5H6K3 240 aa16.52■□□□□ 0.24
GTF3C3-206ENST00000448539 BCRP11274 1271 aa16.52■□□□□ 0.24
GTF3C3-206ENST00000448539 KLRC3Q07444 240 aa16.52■□□□□ 0.24
GTF3C3-206ENST00000448539 RNF20Q5VTR2 975 aa16.52■□□□□ 0.24
GTF3C3-206ENST00000448539 SAMD1Q6SPF0 538 aaPredicted RBP16.52■□□□□ 0.24
GTF3C3-206ENST00000448539 RALYLQ86SE5 291 aaKnown RBP16.52■□□□□ 0.24
GTF3C3-206ENST00000448539 CD99L2Q8TCZ2 262 aa16.52■□□□□ 0.24
GTF3C3-206ENST00000448539 IL17RBQ9NRM6 502 aa16.52■□□□□ 0.24
GTF3C3-206ENST00000448539 HOXC10Q9NYD6 342 aa16.52■□□□□ 0.24
GTF3C3-206ENST00000448539 ISY1Q9ULR0 285 aaKnown RBP16.52■□□□□ 0.24
GTF3C3-206ENST00000448539 FLOT1O75955 427 aa16.51■□□□□ 0.23
GTF3C3-206ENST00000448539 REC8O95072 547 aa16.51■□□□□ 0.23
GTF3C3-206ENST00000448539 NDUFB10O96000 172 aa16.51■□□□□ 0.23
GTF3C3-206ENST00000448539 LACTBP83111 547 aaPredicted RBP16.51■□□□□ 0.23
GTF3C3-206ENST00000448539 MLLT1Q03111 559 aaPredicted RBP16.51■□□□□ 0.23
GTF3C3-206ENST00000448539 COG2Q14746 738 aa16.51■□□□□ 0.23
GTF3C3-206ENST00000448539 FAM110CQ1W6H9 321 aa16.51■□□□□ 0.23
GTF3C3-206ENST00000448539 KIAA1755Q5JYT7 1200 aa16.51■□□□□ 0.23
GTF3C3-206ENST00000448539 FAM83BQ5T0W9 1011 aa16.51■□□□□ 0.23
GTF3C3-206ENST00000448539 SLFN13Q68D06 897 aa16.51■□□□□ 0.23
GTF3C3-206ENST00000448539 GMCL1P1Q8NEA9 526 aa16.51■□□□□ 0.23
GTF3C3-206ENST00000448539 NCOA7Q8NI08 942 aa16.51■□□□□ 0.23
GTF3C3-206ENST00000448539 TTC14Q96N46 770 aa16.51■□□□□ 0.23
GTF3C3-206ENST00000448539 UBAC1Q9BSL1 405 aa16.51■□□□□ 0.23
GTF3C3-206ENST00000448539 GREB1LQ9C091 1923 aaPredicted RBP16.51■□□□□ 0.23
GTF3C3-206ENST00000448539 ECM2O94769 699 aaPredicted RBP16.5■□□□□ 0.23
GTF3C3-206ENST00000448539 TOP1P11387 765 aaKnown RBP16.5■□□□□ 0.23
GTF3C3-206ENST00000448539 GPRC5AQ8NFJ5 357 aa16.5■□□□□ 0.23
GTF3C3-206ENST00000448539 ZKSCAN3Q9BRR0 538 aa16.5■□□□□ 0.23
GTF3C3-206ENST00000448539 PAGR1Q9BTK6 254 aa16.5■□□□□ 0.23
GTF3C3-206ENST00000448539 EFCC1Q9HA90 598 aa16.5■□□□□ 0.23
GTF3C3-206ENST00000448539 ZSWIM5Q9P217 1185 aa16.5■□□□□ 0.23
GTF3C3-206ENST00000448539 TRIM17Q9Y577 477 aa16.5■□□□□ 0.23
GTF3C3-206ENST00000448539 LAMA4Q16363 1823 aa16.49■□□□□ 0.23
GTF3C3-206ENST00000448539 E7EWF7 191 aa16.49■□□□□ 0.23
GTF3C3-206ENST00000448539 SLC27A2O14975 620 aa16.49■□□□□ 0.23
GTF3C3-206ENST00000448539 FMNL1O95466 1100 aaPredicted RBP16.49■□□□□ 0.23
GTF3C3-206ENST00000448539 HOXD10P28358 340 aa16.49■□□□□ 0.23
GTF3C3-206ENST00000448539 SLC1A4P43007 532 aa16.49■□□□□ 0.23
GTF3C3-206ENST00000448539 PSMC4P43686 418 aa16.49■□□□□ 0.23
GTF3C3-206ENST00000448539 FCGRTP55899 365 aa16.49■□□□□ 0.23
GTF3C3-206ENST00000448539 PKN2Q16513 984 aaKnown RBP16.49■□□□□ 0.23
GTF3C3-206ENST00000448539 CREB3L3Q68CJ9 461 aa16.49■□□□□ 0.23
GTF3C3-206ENST00000448539 DGKHQ86XP1 1220 aa16.49■□□□□ 0.23
GTF3C3-206ENST00000448539 CCAR1Q8IX12 1150 aaKnown RBP16.49■□□□□ 0.23
GTF3C3-206ENST00000448539 ZSCAN10Q96SZ4 725 aaPredicted RBP16.49■□□□□ 0.23
GTF3C3-206ENST00000448539 NUP88Q99567 741 aaPredicted RBP16.49■□□□□ 0.23
GTF3C3-206ENST00000448539 RNF216Q9NWF9 866 aaPredicted RBP16.49■□□□□ 0.23
GTF3C3-206ENST00000448539 MTMR7Q9Y216 660 aa16.49■□□□□ 0.23
GTF3C3-206ENST00000448539 RABGAP1Q9Y3P9 1069 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms