RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 EMILIN3Q9NT22 766 aa29.87■■■□□ 2.37
HTATSF1-203ENST00000448450 VPS53Q5VIR6 699 aa29.86■■■□□ 2.37
HTATSF1-203ENST00000448450 TMEM179Q6ZVK1 233 aa29.86■■■□□ 2.37
HTATSF1-203ENST00000448450 TICAM2Q86XR7 235 aa29.86■■■□□ 2.37
HTATSF1-203ENST00000448450 CCDC17Q96LX7 622 aa29.86■■■□□ 2.37
HTATSF1-203ENST00000448450 CRISPLD2Q9H0B8 497 aa29.86■■■□□ 2.37
HTATSF1-203ENST00000448450 A0A1W2PPC1 479 aa29.85■■■□□ 2.37
HTATSF1-203ENST00000448450 CLEC10AQ8IUN9 316 aa29.85■■■□□ 2.37
HTATSF1-203ENST00000448450 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.85■■■□□ 2.37
HTATSF1-203ENST00000448450 MKNK2Q9HBH9 465 aa29.85■■■□□ 2.37
HTATSF1-203ENST00000448450 LAMA3Q16787 3333 aa29.85■■■□□ 2.37
HTATSF1-203ENST00000448450 FOXP2O15409 715 aa29.84■■■□□ 2.37
HTATSF1-203ENST00000448450 HMGCRP04035 888 aa29.84■■■□□ 2.37
HTATSF1-203ENST00000448450 TTC22Q5TAA0 569 aa29.84■■■□□ 2.37
HTATSF1-203ENST00000448450 ASCC2Q9H1I8 757 aaPredicted RBP29.84■■■□□ 2.37
HTATSF1-203ENST00000448450 ALPK3Q96L96 1907 aa29.84■■■□□ 2.37
HTATSF1-203ENST00000448450 NECAB2Q7Z6G3 386 aa29.83■■■□□ 2.37
HTATSF1-203ENST00000448450 ZNF589Q86UQ0 364 aaPredicted RBP29.83■■■□□ 2.37
HTATSF1-203ENST00000448450 PAWRQ96IZ0 340 aaKnown RBP29.83■■■□□ 2.37
HTATSF1-203ENST00000448450 A0A1W2PRG0 241 aa29.82■■■□□ 2.36
HTATSF1-203ENST00000448450 PRDM1O75626 825 aa29.82■■■□□ 2.36
HTATSF1-203ENST00000448450 CWC27Q6UX04 472 aaKnown RBP29.82■■■□□ 2.36
HTATSF1-203ENST00000448450 KIAA1683Q9H0B3 1180 aa29.82■■■□□ 2.36
HTATSF1-203ENST00000448450 DIAPH3Q9NSV4 1193 aa29.82■■■□□ 2.36
HTATSF1-203ENST00000448450 GSPT1P15170 499 aaKnown RBP29.81■■■□□ 2.36
HTATSF1-203ENST00000448450 RASA1P20936 1047 aa29.81■■■□□ 2.36
HTATSF1-203ENST00000448450 USP14P54578 494 aa29.81■■■□□ 2.36
HTATSF1-203ENST00000448450 IRX3P78415 501 aaPredicted RBP29.81■■■□□ 2.36
HTATSF1-203ENST00000448450 PPARAQ07869 468 aa29.81■■■□□ 2.36
HTATSF1-203ENST00000448450 ROBO3Q96MS0 1386 aa29.8■■■□□ 2.36
HTATSF1-203ENST00000448450 ATP2B2Q01814 1243 aa29.8■■■□□ 2.36
HTATSF1-203ENST00000448450 ICA1Q05084 483 aa29.8■■■□□ 2.36
HTATSF1-203ENST00000448450 SIAH1Q8IUQ4 282 aa29.8■■■□□ 2.36
HTATSF1-203ENST00000448450 ANKLE1Q8NAG6 615 aa29.8■■■□□ 2.36
HTATSF1-203ENST00000448450 P2RX7Q99572 595 aaKnown RBP29.8■■■□□ 2.36
HTATSF1-203ENST00000448450 HOXA7P31268 230 aaPredicted RBP29.79■■■□□ 2.36
HTATSF1-203ENST00000448450 ZNF444Q8N0Y2 327 aaPredicted RBP29.79■■■□□ 2.36
HTATSF1-203ENST00000448450 CCDC171Q6TFL3 1326 aa29.78■■■□□ 2.36
HTATSF1-203ENST00000448450 SLC3A2P08195 630 aaKnown RBP29.78■■■□□ 2.36
HTATSF1-203ENST00000448450 CTDSPL2Q05D32 466 aa29.78■■■□□ 2.36
HTATSF1-203ENST00000448450 DIS3LQ8TF46 1054 aaKnown RBP29.78■■■□□ 2.36
HTATSF1-203ENST00000448450 C12orf42Q96LP6 360 aa29.78■■■□□ 2.36
HTATSF1-203ENST00000448450 ARHGEF10LQ9HCE6 1279 aa29.78■■■□□ 2.36
HTATSF1-203ENST00000448450 HMX1Q9NP08 348 aaPredicted RBP29.78■■■□□ 2.36
HTATSF1-203ENST00000448450 PLXNB2O15031 1838 aa29.78■■■□□ 2.36
HTATSF1-203ENST00000448450 RPTORQ8N122 1335 aa29.77■■■□□ 2.36
HTATSF1-203ENST00000448450 HIP1O00291 1037 aa29.77■■■□□ 2.36
HTATSF1-203ENST00000448450 NEFLP07196 543 aa29.77■■■□□ 2.36
HTATSF1-203ENST00000448450 HSPD1P10809 573 aaKnown RBP29.77■■■□□ 2.36
HTATSF1-203ENST00000448450 CENPQQ7L2Z9 268 aaPredicted RBP29.77■■■□□ 2.36
HTATSF1-203ENST00000448450 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.77■■■□□ 2.36
HTATSF1-203ENST00000448450 KANSL2Q9H9L4 492 aa29.77■■■□□ 2.36
HTATSF1-203ENST00000448450 ZNF287Q9HBT7 754 aa29.77■■■□□ 2.36
HTATSF1-203ENST00000448450 MORF4L1Q9UBU8 362 aa29.77■■■□□ 2.36
HTATSF1-203ENST00000448450 FGAP02671 866 aa29.76■■■□□ 2.35
HTATSF1-203ENST00000448450 EEF2P13639 858 aaKnown RBP29.76■■■□□ 2.35
HTATSF1-203ENST00000448450 VCAM1P19320 739 aa29.76■■■□□ 2.35
HTATSF1-203ENST00000448450 PDE4BQ07343 736 aa29.76■■■□□ 2.35
HTATSF1-203ENST00000448450 ALX1Q15699 326 aa29.76■■■□□ 2.35
HTATSF1-203ENST00000448450 INCENPQ9NQS7 918 aa29.76■■■□□ 2.35
HTATSF1-203ENST00000448450 GJD2Q9UKL4 321 aa29.76■■■□□ 2.35
HTATSF1-203ENST00000448450 USP17L15C9J2P7 530 aa29.75■■■□□ 2.35
HTATSF1-203ENST00000448450 USP17L13C9JLJ4 530 aa29.75■■■□□ 2.35
HTATSF1-203ENST00000448450 USP17L11C9JVI0 530 aa29.75■■■□□ 2.35
HTATSF1-203ENST00000448450 USP17L18D6R9N7 530 aa29.75■■■□□ 2.35
HTATSF1-203ENST00000448450 USP17L22D6RA61 530 aa29.75■■■□□ 2.35
HTATSF1-203ENST00000448450 USP17L17D6RBQ6 530 aa29.75■■■□□ 2.35
HTATSF1-203ENST00000448450 USP17L19D6RCP7 530 aa29.75■■■□□ 2.35
HTATSF1-203ENST00000448450 USP17L20D6RJB6 530 aa29.75■■■□□ 2.35
HTATSF1-203ENST00000448450 MFAP1P55081 439 aaKnown RBP29.75■■■□□ 2.35
HTATSF1-203ENST00000448450 USP17L24Q0WX57 530 aa29.75■■■□□ 2.35
HTATSF1-203ENST00000448450 SKAP1Q86WV1 359 aa29.75■■■□□ 2.35
HTATSF1-203ENST00000448450 COL6A3P12111 3177 aa29.75■■■□□ 2.35
HTATSF1-203ENST00000448450 PEX10O60683 326 aa29.74■■■□□ 2.35
HTATSF1-203ENST00000448450 HERVK_113P62684 666 aa29.74■■■□□ 2.35
HTATSF1-203ENST00000448450 KIAA1755Q5JYT7 1200 aa29.74■■■□□ 2.35
HTATSF1-203ENST00000448450 CCDC136Q96JN2 1154 aa29.74■■■□□ 2.35
HTATSF1-203ENST00000448450 NBPF3Q9H094 633 aa29.74■■■□□ 2.35
HTATSF1-203ENST00000448450 RPAP3Q9H6T3 665 aaPredicted RBP29.74■■■□□ 2.35
HTATSF1-203ENST00000448450 TMX2Q9Y320 296 aa29.74■■■□□ 2.35
HTATSF1-203ENST00000448450 FAM47AQ5JRC9 791 aa29.73■■■□□ 2.35
HTATSF1-203ENST00000448450 CATSPERGQ6ZRH7 1159 aa29.73■■■□□ 2.35
HTATSF1-203ENST00000448450 C7orf61Q8IZ16 206 aa29.73■■■□□ 2.35
HTATSF1-203ENST00000448450 SH2D4AQ9H788 454 aa29.73■■■□□ 2.35
HTATSF1-203ENST00000448450 TRIM32Q13049 653 aa29.72■■■□□ 2.35
HTATSF1-203ENST00000448450 SPICE1Q8N0Z3 855 aa29.72■■■□□ 2.35
HTATSF1-203ENST00000448450 SOCS4Q8WXH5 440 aa29.72■■■□□ 2.35
HTATSF1-203ENST00000448450 TRIB2Q92519 343 aa29.72■■■□□ 2.35
HTATSF1-203ENST00000448450 RAD21O60216 631 aa29.71■■■□□ 2.35
HTATSF1-203ENST00000448450 TFAP4Q01664 338 aa29.71■■■□□ 2.35
HTATSF1-203ENST00000448450 GPRC5AQ8NFJ5 357 aa29.71■■■□□ 2.35
HTATSF1-203ENST00000448450 VCPKMTQ9H867 229 aa29.71■■■□□ 2.35
HTATSF1-203ENST00000448450 TACC3Q9Y6A5 838 aa29.71■■■□□ 2.35
HTATSF1-203ENST00000448450 SOX1O00570 391 aaPredicted RBP29.7■■■□□ 2.35
HTATSF1-203ENST00000448450 CENPBP07199 599 aaPredicted RBP29.7■■■□□ 2.35
HTATSF1-203ENST00000448450 TSPY3P0CV98 308 aa29.7■■■□□ 2.35
HTATSF1-203ENST00000448450 TSPY8P0CW00 308 aa29.7■■■□□ 2.35
HTATSF1-203ENST00000448450 CYP2B6P20813 491 aa29.7■■■□□ 2.35
HTATSF1-203ENST00000448450 HAND2P61296 217 aa29.7■■■□□ 2.35
HTATSF1-203ENST00000448450 NUDT12Q9BQG2 462 aa29.7■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms