RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 TXNRD2Q9NNW7 524 aa29.69■■■□□ 2.34
UFD1-204ENST00000447868 ANAPC4Q9UJX5 808 aa29.69■■■□□ 2.34
UFD1-204ENST00000447868 MYPNQ86TC9 1320 aa29.69■■■□□ 2.34
UFD1-204ENST00000447868 TNPO2O14787 897 aaKnown RBP29.68■■■□□ 2.34
UFD1-204ENST00000447868 SKAP1Q86WV1 359 aa29.68■■■□□ 2.34
UFD1-204ENST00000447868 LPAR1Q92633 364 aa29.68■■■□□ 2.34
UFD1-204ENST00000447868 RBPJLQ9UBG7 517 aa29.68■■■□□ 2.34
UFD1-204ENST00000447868 MORF4L1Q9UBU8 362 aa29.68■■■□□ 2.34
UFD1-204ENST00000447868 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.68■■■□□ 2.34
UFD1-204ENST00000447868 TACC3Q9Y6A5 838 aa29.68■■■□□ 2.34
UFD1-204ENST00000447868 PRMT2P55345 433 aa29.67■■■□□ 2.34
UFD1-204ENST00000447868 HAND2P61296 217 aa29.67■■■□□ 2.34
UFD1-204ENST00000447868 TFAP4Q01664 338 aa29.67■■■□□ 2.34
UFD1-204ENST00000447868 CCDC136Q96JN2 1154 aa29.67■■■□□ 2.34
UFD1-204ENST00000447868 GOPCQ9HD26 462 aa29.67■■■□□ 2.34
UFD1-204ENST00000447868 ZMYM6O95789 1325 aa29.67■■■□□ 2.34
UFD1-204ENST00000447868 IGKV6D-41A0A0C4DH26 115 aa29.66■■■□□ 2.34
UFD1-204ENST00000447868 PRKCZQ05513 592 aa29.66■■■□□ 2.34
UFD1-204ENST00000447868 POTEEQ6S8J3 1075 aa29.66■■■□□ 2.34
UFD1-204ENST00000447868 GPRC5AQ8NFJ5 357 aa29.66■■■□□ 2.34
UFD1-204ENST00000447868 GTF3C2Q8WUA4 911 aaPredicted RBP29.66■■■□□ 2.34
UFD1-204ENST00000447868 CEP95Q96GE4 821 aa29.66■■■□□ 2.34
UFD1-204ENST00000447868 NYAP2Q9P242 653 aa29.66■■■□□ 2.34
UFD1-204ENST00000447868 CLIP2Q9UDT6 1046 aa29.66■■■□□ 2.34
UFD1-204ENST00000447868 NEDD1Q8NHV4 660 aa29.65■■■□□ 2.34
UFD1-204ENST00000447868 RAET1EQ8TD07 263 aa29.65■■■□□ 2.34
UFD1-204ENST00000447868 IL25Q9H293 177 aa29.65■■■□□ 2.34
UFD1-204ENST00000447868 TOMM22Q9NS69 142 aa29.65■■■□□ 2.34
UFD1-204ENST00000447868 GABRQQ9UN88 632 aa29.65■■■□□ 2.34
UFD1-204ENST00000447868 HTTP42858 3142 aa29.65■■■□□ 2.34
UFD1-204ENST00000447868 MYH4Q9Y623 1939 aa29.65■■■□□ 2.34
UFD1-204ENST00000447868 RANBP6O60518 1105 aaKnown RBP29.64■■■□□ 2.34
UFD1-204ENST00000447868 SOX10P56693 466 aa29.64■■■□□ 2.34
UFD1-204ENST00000447868 ERVK-9P63128 1117 aa29.64■■■□□ 2.34
UFD1-204ENST00000447868 ERVK-24P63145 666 aa29.64■■■□□ 2.34
UFD1-204ENST00000447868 SLC9C1Q4G0N8 1177 aa29.64■■■□□ 2.34
UFD1-204ENST00000447868 MTMR4Q9NYA4 1195 aa29.64■■■□□ 2.34
UFD1-204ENST00000447868 PLIN4Q96Q06 1357 aa29.64■■■□□ 2.33
UFD1-204ENST00000447868 TSPY2A6NKD2 308 aa29.63■■■□□ 2.33
UFD1-204ENST00000447868 SPDYE16A6NNV3 312 aaPredicted RBP29.63■■■□□ 2.33
UFD1-204ENST00000447868 WDR46O15213 610 aaKnown RBP29.63■■■□□ 2.33
UFD1-204ENST00000447868 CENPBP07199 599 aaPredicted RBP29.63■■■□□ 2.33
UFD1-204ENST00000447868 CHMLP26374 656 aa29.63■■■□□ 2.33
UFD1-204ENST00000447868 COG2Q14746 738 aa29.63■■■□□ 2.33
UFD1-204ENST00000447868 Q3C1V9 767 aa29.63■■■□□ 2.33
UFD1-204ENST00000447868 RRP12Q5JTH9 1297 aaKnown RBP29.63■■■□□ 2.33
UFD1-204ENST00000447868 SAMD1Q6SPF0 538 aaPredicted RBP29.63■■■□□ 2.33
UFD1-204ENST00000447868 COA7Q96BR5 231 aa29.63■■■□□ 2.33
UFD1-204ENST00000447868 CNMDO75829 334 aa29.62■■■□□ 2.33
UFD1-204ENST00000447868 FLOT1O75955 427 aa29.62■■■□□ 2.33
UFD1-204ENST00000447868 SH3TC2Q8TF17 1288 aa29.62■■■□□ 2.33
UFD1-204ENST00000447868 RABGAP1Q9Y3P9 1069 aa29.62■■■□□ 2.33
UFD1-204ENST00000447868 DOCK3Q8IZD9 2030 aa29.62■■■□□ 2.33
UFD1-204ENST00000447868 ORC4O43929 436 aa29.61■■■□□ 2.33
UFD1-204ENST00000447868 TTLL1O95922 423 aa29.61■■■□□ 2.33
UFD1-204ENST00000447868 ARMC5Q96C12 935 aa29.61■■■□□ 2.33
UFD1-204ENST00000447868 DSCC1Q9BVC3 393 aa29.61■■■□□ 2.33
UFD1-204ENST00000447868 HOXC10Q9NYD6 342 aa29.61■■■□□ 2.33
UFD1-204ENST00000447868 FLT3LGP49771 235 aa29.6■■■□□ 2.33
UFD1-204ENST00000447868 FAM83BQ5T0W9 1011 aa29.6■■■□□ 2.33
UFD1-204ENST00000447868 LBX2Q6XYB7 198 aa29.6■■■□□ 2.33
UFD1-204ENST00000447868 NBPF11Q86T75 865 aa29.6■■■□□ 2.33
UFD1-204ENST00000447868 CCAR1Q8IX12 1150 aaKnown RBP29.6■■■□□ 2.33
UFD1-204ENST00000447868 LRRC47Q8N1G4 583 aaKnown RBP29.6■■■□□ 2.33
UFD1-204ENST00000447868 RUFY2Q8WXA3 655 aa29.6■■■□□ 2.33
UFD1-204ENST00000447868 NBPF3Q9H094 633 aa29.6■■■□□ 2.33
UFD1-204ENST00000447868 BTBD7Q9P203 1132 aa29.6■■■□□ 2.33
UFD1-204ENST00000447868 RLFQ13129 1914 aa29.59■■■□□ 2.33
UFD1-204ENST00000447868 F5H6K3 240 aa29.59■■■□□ 2.33
UFD1-204ENST00000447868 ZNF213O14771 459 aa29.59■■■□□ 2.33
UFD1-204ENST00000447868 NMT2O60551 498 aa29.59■■■□□ 2.33
UFD1-204ENST00000447868 FGRP09769 529 aa29.59■■■□□ 2.33
UFD1-204ENST00000447868 KLRC3Q07444 240 aa29.59■■■□□ 2.33
UFD1-204ENST00000447868 TBC1D10CQ8IV04 446 aa29.59■■■□□ 2.33
UFD1-204ENST00000447868 NUP88Q99567 741 aaPredicted RBP29.59■■■□□ 2.33
UFD1-204ENST00000447868 PORCNQ9H237 461 aa29.59■■■□□ 2.33
UFD1-204ENST00000447868 RAD50Q92878 1312 aa29.59■■■□□ 2.33
UFD1-204ENST00000447868 NDUFB10O96000 172 aa29.58■■■□□ 2.33
UFD1-204ENST00000447868 MYCP01106 439 aaPredicted RBP29.58■■■□□ 2.33
UFD1-204ENST00000447868 DSG3P32926 999 aa29.58■■■□□ 2.33
UFD1-204ENST00000447868 LAMA4Q16363 1823 aa29.58■■■□□ 2.33
UFD1-204ENST00000447868 AKNAD1Q5T1N1 836 aa29.58■■■□□ 2.33
UFD1-204ENST00000447868 MFSD6Q6ZSS7 791 aa29.58■■■□□ 2.33
UFD1-204ENST00000447868 MKL1Q969V6 931 aa29.58■■■□□ 2.33
UFD1-204ENST00000447868 STAG1Q8WVM7 1258 aa29.57■■■□□ 2.32
UFD1-204ENST00000447868 ATG4CQ96DT6 458 aa29.57■■■□□ 2.32
UFD1-204ENST00000447868 ZNF333Q96JL9 665 aa29.57■■■□□ 2.32
UFD1-204ENST00000447868 CWC22Q9HCG8 908 aaKnown RBP29.57■■■□□ 2.32
UFD1-204ENST00000447868 IL17RBQ9NRM6 502 aa29.57■■■□□ 2.32
UFD1-204ENST00000447868 FBXO28Q9NVF7 368 aa29.57■■■□□ 2.32
UFD1-204ENST00000447868 PARP14Q460N5 1801 aa29.57■■■□□ 2.32
UFD1-204ENST00000447868 MAPK4P31152 587 aa29.56■■■□□ 2.32
UFD1-204ENST00000447868 GRK4P32298 578 aa29.56■■■□□ 2.32
UFD1-204ENST00000447868 CCNA1P78396 465 aa29.56■■■□□ 2.32
UFD1-204ENST00000447868 STX8Q9UNK0 236 aa29.56■■■□□ 2.32
UFD1-204ENST00000447868 CENPFP49454 3210 aa29.56■■■□□ 2.32
UFD1-204ENST00000447868 ADCY3O60266 1144 aa29.55■■■□□ 2.32
UFD1-204ENST00000447868 WDR78Q5VTH9 848 aa29.55■■■□□ 2.32
UFD1-204ENST00000447868 RNF41Q9H4P4 317 aaPredicted RBP29.55■■■□□ 2.32
UFD1-204ENST00000447868 BIN2Q9UBW5 565 aaPredicted RBP29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms