RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 PDCP20941 246 aa28.94■■■□□ 2.22
RFFL-206ENST00000447669 SSRP1Q08945 709 aaKnown RBP28.94■■■□□ 2.22
RFFL-206ENST00000447669 FMNL1O95466 1100 aaPredicted RBP28.93■■■□□ 2.22
RFFL-206ENST00000447669 TMTC3Q6ZXV5 915 aa28.93■■■□□ 2.22
RFFL-206ENST00000447669 MYH6P13533 1939 aa28.93■■■□□ 2.22
RFFL-206ENST00000447669 F13A1P00488 732 aa28.93■■■□□ 2.22
RFFL-206ENST00000447669 CCDC84Q86UT8 332 aaPredicted RBP28.93■■■□□ 2.22
RFFL-206ENST00000447669 TCHHQ07283 1943 aa28.92■■■□□ 2.22
RFFL-206ENST00000447669 GLTPD2A6NH11 291 aa28.92■■■□□ 2.22
RFFL-206ENST00000447669 H3BQV1 296 aa28.92■■■□□ 2.22
RFFL-206ENST00000447669 RAD21O60216 631 aa28.92■■■□□ 2.22
RFFL-206ENST00000447669 TBC1D12O60347 775 aa28.92■■■□□ 2.22
RFFL-206ENST00000447669 GRM4Q14833 912 aa28.92■■■□□ 2.22
RFFL-206ENST00000447669 SLC35G1Q2M3R5 365 aa28.92■■■□□ 2.22
RFFL-206ENST00000447669 IFFO2Q5TF58 517 aa28.92■■■□□ 2.22
RFFL-206ENST00000447669 FAM173BQ6P4H8 233 aa28.92■■■□□ 2.22
RFFL-206ENST00000447669 TMEM179Q6ZVK1 233 aa28.92■■■□□ 2.22
RFFL-206ENST00000447669 ALG1Q9BT22 464 aa28.92■■■□□ 2.22
RFFL-206ENST00000447669 BAG4O95429 457 aaKnown RBP28.91■■■□□ 2.22
RFFL-206ENST00000447669 ICA1Q05084 483 aa28.91■■■□□ 2.22
RFFL-206ENST00000447669 RBM28Q9NW13 759 aaKnown RBP28.91■■■□□ 2.22
RFFL-206ENST00000447669 V9GY48 417 aaPredicted RBP28.91■■■□□ 2.22
RFFL-206ENST00000447669 FRMPD2Q68DX3 1309 aaPredicted RBP28.91■■■□□ 2.22
RFFL-206ENST00000447669 KANSL2Q9H9L4 492 aa28.91■■■□□ 2.22
RFFL-206ENST00000447669 APOBEC3FQ8IUX4 373 aaKnown RBP28.9■■■□□ 2.22
RFFL-206ENST00000447669 C8orf76Q96K31 380 aa28.9■■■□□ 2.22
RFFL-206ENST00000447669 CABP5Q9NP86 173 aa28.9■■■□□ 2.22
RFFL-206ENST00000447669 PHF20L1A8MW92 1017 aa28.89■■■□□ 2.22
RFFL-206ENST00000447669 VEGFAP15692 232 aaPredicted RBP28.89■■■□□ 2.22
RFFL-206ENST00000447669 MAP3K10Q02779 954 aa28.89■■■□□ 2.22
RFFL-206ENST00000447669 L3MBTL3Q96JM7 780 aaPredicted RBP28.89■■■□□ 2.22
RFFL-206ENST00000447669 CNTNAP5Q8WYK1 1306 aa28.89■■■□□ 2.22
RFFL-206ENST00000447669 PDHBP11177 359 aa28.89■■■□□ 2.21
RFFL-206ENST00000447669 A0A1W2PRG0 241 aa28.88■■■□□ 2.21
RFFL-206ENST00000447669 PALM3A6NDB9 673 aaPredicted RBP28.88■■■□□ 2.21
RFFL-206ENST00000447669 POTECB2RU33 542 aa28.88■■■□□ 2.21
RFFL-206ENST00000447669 CAP2P40123 477 aa28.88■■■□□ 2.21
RFFL-206ENST00000447669 PPP2R5BQ15173 497 aa28.88■■■□□ 2.21
RFFL-206ENST00000447669 ZBTB21Q9ULJ3 1066 aa28.88■■■□□ 2.21
RFFL-206ENST00000447669 ADM5C9JUS6 153 aa28.87■■■□□ 2.21
RFFL-206ENST00000447669 CYTH3O43739 400 aa28.87■■■□□ 2.21
RFFL-206ENST00000447669 KIF5BP33176 963 aa28.87■■■□□ 2.21
RFFL-206ENST00000447669 EPHX2P34913 555 aa28.87■■■□□ 2.21
RFFL-206ENST00000447669 ECE1P42892 770 aa28.87■■■□□ 2.21
RFFL-206ENST00000447669 PKN1Q16512 942 aa28.87■■■□□ 2.21
RFFL-206ENST00000447669 TRIM22Q8IYM9 498 aa28.87■■■□□ 2.21
RFFL-206ENST00000447669 KIF3AQ9Y496 699 aa28.87■■■□□ 2.21
RFFL-206ENST00000447669 MCM4P33991 863 aa28.87■■■□□ 2.21
RFFL-206ENST00000447669 MCTP1Q6DN14 999 aa28.87■■■□□ 2.21
RFFL-206ENST00000447669 ACER1Q8TDN7 264 aa28.87■■■□□ 2.21
RFFL-206ENST00000447669 SHISA4Q96DD7 197 aa28.87■■■□□ 2.21
RFFL-206ENST00000447669 UBA5Q9GZZ9 404 aa28.87■■■□□ 2.21
RFFL-206ENST00000447669 KLRF2D3W0D1 207 aa28.86■■■□□ 2.21
RFFL-206ENST00000447669 PARP1P09874 1014 aaKnown RBP28.86■■■□□ 2.21
RFFL-206ENST00000447669 PRKG1Q13976 671 aa28.86■■■□□ 2.21
RFFL-206ENST00000447669 GPCPD1Q9NPB8 672 aa28.86■■■□□ 2.21
RFFL-206ENST00000447669 NYAP2Q9P242 653 aa28.86■■■□□ 2.21
RFFL-206ENST00000447669 STK36Q9NRP7 1315 aa28.86■■■□□ 2.21
RFFL-206ENST00000447669 FBXO18Q8NFZ0 1043 aa28.86■■■□□ 2.21
RFFL-206ENST00000447669 MAP3K14Q99558 947 aa28.86■■■□□ 2.21
RFFL-206ENST00000447669 GLIS2Q9BZE0 524 aaPredicted RBP28.86■■■□□ 2.21
RFFL-206ENST00000447669 INPP5BP32019 993 aa28.85■■■□□ 2.21
RFFL-206ENST00000447669 RNF26Q9BY78 433 aaPredicted RBP28.85■■■□□ 2.21
RFFL-206ENST00000447669 PRPF3O43395 683 aaKnown RBP28.84■■■□□ 2.21
RFFL-206ENST00000447669 DEXIO95424 95 aa28.84■■■□□ 2.21
RFFL-206ENST00000447669 EAPPQ56P03 285 aaPredicted RBP28.84■■■□□ 2.21
RFFL-206ENST00000447669 TTBK2Q6IQ55 1244 aa28.84■■■□□ 2.21
RFFL-206ENST00000447669 KCTD1Q719H9 257 aa28.84■■■□□ 2.21
RFFL-206ENST00000447669 MKL1Q969V6 931 aa28.84■■■□□ 2.21
RFFL-206ENST00000447669 GDPD2Q9HCC8 539 aa28.84■■■□□ 2.21
RFFL-206ENST00000447669 VAT1LQ9HCJ6 419 aa28.84■■■□□ 2.21
RFFL-206ENST00000447669 KCNJ14Q9UNX9 436 aa28.84■■■□□ 2.21
RFFL-206ENST00000447669 ATAD5Q96QE3 1844 aa28.84■■■□□ 2.21
RFFL-206ENST00000447669 KRT40Q6A162 431 aa28.84■■■□□ 2.21
RFFL-206ENST00000447669 GBP4Q96PP9 640 aa28.84■■■□□ 2.21
RFFL-206ENST00000447669 AKAP17AQ02040 695 aaKnown RBP28.83■■■□□ 2.21
RFFL-206ENST00000447669 RESTQ13127 1097 aa28.83■■■□□ 2.21
RFFL-206ENST00000447669 CLEC17AQ6ZS10 378 aa28.83■■■□□ 2.21
RFFL-206ENST00000447669 DCPSQ96C86 337 aaKnown RBP28.83■■■□□ 2.21
RFFL-206ENST00000447669 NUP88Q99567 741 aaPredicted RBP28.83■■■□□ 2.21
RFFL-206ENST00000447669 ISY1Q9ULR0 285 aaKnown RBP28.83■■■□□ 2.21
RFFL-206ENST00000447669 SSC5DA1L4H1 1573 aa28.83■■■□□ 2.21
RFFL-206ENST00000447669 SNHG28P0DPA3 235 aa28.82■■■□□ 2.2
RFFL-206ENST00000447669 DNM1Q05193 864 aaKnown RBP28.82■■■□□ 2.2
RFFL-206ENST00000447669 SPICE1Q8N0Z3 855 aa28.82■■■□□ 2.2
RFFL-206ENST00000447669 VPS54Q9P1Q0 977 aa28.82■■■□□ 2.2
RFFL-206ENST00000447669 ZYXQ15942 572 aaKnown RBP28.82■■■□□ 2.2
RFFL-206ENST00000447669 KIAA1755Q5JYT7 1200 aa28.82■■■□□ 2.2
RFFL-206ENST00000447669 ZKSCAN4Q969J2 545 aaPredicted RBP28.82■■■□□ 2.2
RFFL-206ENST00000447669 TAF1DQ9H5J8 278 aaPredicted RBP28.82■■■□□ 2.2
RFFL-206ENST00000447669 ZC3H4Q9UPT8 1303 aaKnown RBP28.82■■■□□ 2.2
RFFL-206ENST00000447669 KIF28PB7ZC32 967 aa28.81■■■□□ 2.2
RFFL-206ENST00000447669 POTEIP0CG38 1075 aa28.81■■■□□ 2.2
RFFL-206ENST00000447669 POTEJP0CG39 1038 aa28.81■■■□□ 2.2
RFFL-206ENST00000447669 SLC16A2P36021 539 aa28.81■■■□□ 2.2
RFFL-206ENST00000447669 CCDC96Q2M329 555 aa28.81■■■□□ 2.2
RFFL-206ENST00000447669 CNPY2Q9Y2B0 182 aa28.81■■■□□ 2.2
RFFL-206ENST00000447669 F5H6K3 240 aa28.81■■■□□ 2.2
RFFL-206ENST00000447669 KLRC3Q07444 240 aa28.81■■■□□ 2.2
RFFL-206ENST00000447669 SLFN13Q68D06 897 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms