RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 SLX4Q8IY92 1834 aa8.7□□□□□ -1.02
TRIM4-204ENST00000447480 MED23Q9ULK4 1368 aa8.7□□□□□ -1.02
TRIM4-204ENST00000447480 FER1L6Q2WGJ9 1857 aa8.7□□□□□ -1.02
TRIM4-204ENST00000447480 MYH13Q9UKX3 1938 aa8.7□□□□□ -1.02
TRIM4-204ENST00000447480 ARHGAP6O43182 974 aa8.69□□□□□ -1.02
TRIM4-204ENST00000447480 ACTN4O43707 911 aaKnown RBP8.69□□□□□ -1.02
TRIM4-204ENST00000447480 DHX16O60231 1041 aaKnown RBP8.69□□□□□ -1.02
TRIM4-204ENST00000447480 STX10O60499 249 aa8.69□□□□□ -1.02
TRIM4-204ENST00000447480 ERLIN1O75477 346 aa8.69□□□□□ -1.02
TRIM4-204ENST00000447480 EIF3JO75822 258 aaKnown RBP8.69□□□□□ -1.02
TRIM4-204ENST00000447480 MCM3P25205 808 aa8.69□□□□□ -1.02
TRIM4-204ENST00000447480 CHRNA5P30532 468 aa8.69□□□□□ -1.02
TRIM4-204ENST00000447480 PLA2G4AP47712 749 aa8.69□□□□□ -1.02
TRIM4-204ENST00000447480 EVCP57679 992 aa8.69□□□□□ -1.02
TRIM4-204ENST00000447480 NLRP12P59046 1061 aa8.69□□□□□ -1.02
TRIM4-204ENST00000447480 PTH1RQ03431 593 aa8.69□□□□□ -1.02
TRIM4-204ENST00000447480 CHRNDQ07001 517 aa8.69□□□□□ -1.02
TRIM4-204ENST00000447480 ST3GAL1Q11201 340 aa8.69□□□□□ -1.02
TRIM4-204ENST00000447480 CAMK4Q16566 473 aa8.69□□□□□ -1.02
TRIM4-204ENST00000447480 FOXD4L6Q3SYB3 417 aaPredicted RBP8.69□□□□□ -1.02
TRIM4-204ENST00000447480 ARHGAP29Q52LW3 1261 aa8.69□□□□□ -1.02
TRIM4-204ENST00000447480 E4F1Q66K89 784 aaPredicted RBP8.69□□□□□ -1.02
TRIM4-204ENST00000447480 FOXD4L3Q6VB84 417 aaPredicted RBP8.69□□□□□ -1.02
TRIM4-204ENST00000447480 C15orf52Q6ZUT6 534 aaKnown RBP8.69□□□□□ -1.02
TRIM4-204ENST00000447480 BRAPQ7Z569 592 aa8.69□□□□□ -1.02
TRIM4-204ENST00000447480 MRPS27Q92552 414 aaKnown RBP8.69□□□□□ -1.02
TRIM4-204ENST00000447480 ZNF516Q92618 1163 aa8.69□□□□□ -1.02
TRIM4-204ENST00000447480 CELF1Q92879 486 aaKnown RBP8.69□□□□□ -1.02
TRIM4-204ENST00000447480 ERCC4Q92889 916 aaPredicted RBP8.69□□□□□ -1.02
TRIM4-204ENST00000447480 PPP1R13BQ96KQ4 1090 aa8.69□□□□□ -1.02
TRIM4-204ENST00000447480 CCDC85AQ96PX6 553 aaPredicted RBP8.69□□□□□ -1.02
TRIM4-204ENST00000447480 NEK1Q96PY6 1258 aa8.69□□□□□ -1.02
TRIM4-204ENST00000447480 ZNF446Q9NWS9 450 aa8.69□□□□□ -1.02
TRIM4-204ENST00000447480 GEMIN8Q9NWZ8 242 aaKnown RBP8.69□□□□□ -1.02
TRIM4-204ENST00000447480 MINPP1Q9UNW1 487 aa8.69□□□□□ -1.02
TRIM4-204ENST00000447480 DICER1Q9UPY3 1922 aaKnown RBP8.69□□□□□ -1.02
TRIM4-204ENST00000447480 ARAP2Q8WZ64 1704 aa8.68□□□□□ -1.02
TRIM4-204ENST00000447480 A0A1B0GUL6 1792 aa8.68□□□□□ -1.02
TRIM4-204ENST00000447480 C6orf229H3BNL8 230 aa8.68□□□□□ -1.02
TRIM4-204ENST00000447480 TADA3O75528 432 aa8.68□□□□□ -1.02
TRIM4-204ENST00000447480 UFL1O94874 794 aa8.68□□□□□ -1.02
TRIM4-204ENST00000447480 LARGE1O95461 756 aa8.68□□□□□ -1.02
TRIM4-204ENST00000447480 UQCRFS1P1P0C7P4 283 aa8.68□□□□□ -1.02
TRIM4-204ENST00000447480 ADD1P35611 737 aaKnown RBP8.68□□□□□ -1.02
TRIM4-204ENST00000447480 TNNT3P45378 269 aaPredicted RBP8.68□□□□□ -1.02
TRIM4-204ENST00000447480 USP5P45974 858 aa8.68□□□□□ -1.02
TRIM4-204ENST00000447480 RFX5P48382 616 aaPredicted RBP8.68□□□□□ -1.02
TRIM4-204ENST00000447480 TOB2Q14106 344 aaPredicted RBP8.68□□□□□ -1.02
TRIM4-204ENST00000447480 WASHC4Q2M389 1173 aa8.68□□□□□ -1.02
TRIM4-204ENST00000447480 EPHA10Q5JZY3 1008 aa8.68□□□□□ -1.02
TRIM4-204ENST00000447480 BLOC1S3Q6QNY0 202 aa8.68□□□□□ -1.02
TRIM4-204ENST00000447480 SULF1Q8IWU6 871 aa8.68□□□□□ -1.02
TRIM4-204ENST00000447480 FMR1NBQ8N0W7 255 aaPredicted RBP8.68□□□□□ -1.02
TRIM4-204ENST00000447480 SYNE4Q8N205 404 aa8.68□□□□□ -1.02
TRIM4-204ENST00000447480 CCDC24Q8N4L8 307 aa8.68□□□□□ -1.02
TRIM4-204ENST00000447480 TACO1Q9BSH4 297 aaKnown RBP8.68□□□□□ -1.02
TRIM4-204ENST00000447480 RTFDC1Q9BY42 306 aaPredicted RBP8.68□□□□□ -1.02
TRIM4-204ENST00000447480 COA1Q9GZY4 146 aa8.68□□□□□ -1.02
TRIM4-204ENST00000447480 IL1RAPL2Q9NP60 686 aa8.68□□□□□ -1.02
TRIM4-204ENST00000447480 SEC31BQ9NQW1 1179 aa8.68□□□□□ -1.02
TRIM4-204ENST00000447480 POLR3EQ9NVU0 708 aa8.68□□□□□ -1.02
TRIM4-204ENST00000447480 HOOK1Q9UJC3 728 aaKnown RBP8.68□□□□□ -1.02
TRIM4-204ENST00000447480 RIPOR2Q9Y4F9 1068 aa8.68□□□□□ -1.02
TRIM4-204ENST00000447480 ZNF804BA4D1E1 1349 aa8.68□□□□□ -1.02
TRIM4-204ENST00000447480 FAM237AA0A1B0GTK4 181 aa8.67□□□□□ -1.02
TRIM4-204ENST00000447480 MAP2K7O14733 419 aa8.67□□□□□ -1.02
TRIM4-204ENST00000447480 C21orf2O43822 256 aa8.67□□□□□ -1.02
TRIM4-204ENST00000447480 TAF5LO75529 589 aa8.67□□□□□ -1.02
TRIM4-204ENST00000447480 ATP5JP18859 108 aa8.67□□□□□ -1.02
TRIM4-204ENST00000447480 LMNB1P20700 586 aa8.67□□□□□ -1.02
TRIM4-204ENST00000447480 KCNA3P22001 575 aa8.67□□□□□ -1.02
TRIM4-204ENST00000447480 CMA1P23946 247 aa8.67□□□□□ -1.02
TRIM4-204ENST00000447480 CASQ1P31415 396 aa8.67□□□□□ -1.02
TRIM4-204ENST00000447480 ACTN2P35609 894 aa8.67□□□□□ -1.02
TRIM4-204ENST00000447480 SMC1AQ14683 1233 aaKnown RBP8.67□□□□□ -1.02
TRIM4-204ENST00000447480 ZSCAN26Q16670 478 aa8.67□□□□□ -1.02
TRIM4-204ENST00000447480 ERCC6LQ2NKX8 1250 aa8.67□□□□□ -1.02
TRIM4-204ENST00000447480 ADCK5Q3MIX3 580 aa8.67□□□□□ -1.02
TRIM4-204ENST00000447480 DHX32Q7L7V1 743 aaKnown RBP8.67□□□□□ -1.02
TRIM4-204ENST00000447480 PODNQ7Z5L7 613 aa8.67□□□□□ -1.02
TRIM4-204ENST00000447480 HOMER1Q86YM7 354 aa8.67□□□□□ -1.02
TRIM4-204ENST00000447480 NIM1KQ8IY84 436 aa8.67□□□□□ -1.02
TRIM4-204ENST00000447480 CEP112Q8N8E3 955 aa8.67□□□□□ -1.02
TRIM4-204ENST00000447480 JMYQ8N9B5 988 aa8.67□□□□□ -1.02
TRIM4-204ENST00000447480 TBC1D22AQ8WUA7 517 aa8.67□□□□□ -1.02
TRIM4-204ENST00000447480 MYO3BQ8WXR4 1341 aa8.67□□□□□ -1.02
TRIM4-204ENST00000447480 SDF4Q9BRK5 362 aa8.67□□□□□ -1.02
TRIM4-204ENST00000447480 NAA15Q9BXJ9 866 aaKnown RBP8.67□□□□□ -1.02
TRIM4-204ENST00000447480 SIL1Q9H173 461 aa8.67□□□□□ -1.02
TRIM4-204ENST00000447480 IL25Q9H293 177 aa8.67□□□□□ -1.02
TRIM4-204ENST00000447480 TFIP11Q9UBB9 837 aaKnown RBP8.67□□□□□ -1.02
TRIM4-204ENST00000447480 TAF1P21675 1872 aa8.66□□□□□ -1.02
TRIM4-204ENST00000447480 MAST3O60307 1309 aa8.66□□□□□ -1.02
TRIM4-204ENST00000447480 PDS5AQ29RF7 1337 aaKnown RBP8.66□□□□□ -1.02
TRIM4-204ENST00000447480 WDR19Q8NEZ3 1342 aa8.66□□□□□ -1.02
TRIM4-204ENST00000447480 A0A1B0GUL7 405 aa8.66□□□□□ -1.02
TRIM4-204ENST00000447480 SMC2O95347 1197 aa8.66□□□□□ -1.02
TRIM4-204ENST00000447480 TXLNAP40222 546 aa8.66□□□□□ -1.02
TRIM4-204ENST00000447480 MAGEA9P43362 315 aa8.66□□□□□ -1.02
TRIM4-204ENST00000447480 EIF6P56537 245 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms