RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 BACE1P56817 501 aa12□□□□□ -0.49
LIN54-203ENST00000446851 HSCBQ8IWL3 235 aa12□□□□□ -0.49
LIN54-203ENST00000446851 SENP2Q9HC62 589 aa12□□□□□ -0.49
LIN54-203ENST00000446851 MTMR4Q9NYA4 1195 aa12□□□□□ -0.49
LIN54-203ENST00000446851 METAP2P50579 478 aaKnown RBP eCLIP12□□□□□ -0.49
LIN54-203ENST00000446851 USP14P54578 494 aa12□□□□□ -0.49
LIN54-203ENST00000446851 FKBP1BP68106 108 aa12□□□□□ -0.49
LIN54-203ENST00000446851 SREBF2Q12772 1141 aa12□□□□□ -0.49
LIN54-203ENST00000446851 FAM184AQ8NB25 1140 aa12□□□□□ -0.49
LIN54-203ENST00000446851 SEC63Q9UGP8 760 aaKnown RBP12□□□□□ -0.49
LIN54-203ENST00000446851 BMP3P12645 472 aa11.99□□□□□ -0.49
LIN54-203ENST00000446851 NECTIN1Q15223 517 aa11.99□□□□□ -0.49
LIN54-203ENST00000446851 TTBK2Q6IQ55 1244 aa11.99□□□□□ -0.49
LIN54-203ENST00000446851 FASTKD5Q7L8L6 764 aaKnown RBP11.99□□□□□ -0.49
LIN54-203ENST00000446851 STAG1Q8WVM7 1258 aa11.99□□□□□ -0.49
LIN54-203ENST00000446851 TLL2Q9Y6L7 1015 aa11.99□□□□□ -0.49
LIN54-203ENST00000446851 SBF1O95248 1867 aa11.99□□□□□ -0.49
LIN54-203ENST00000446851 BAZ2BQ9UIF8 2168 aaKnown RBP11.99□□□□□ -0.49
LIN54-203ENST00000446851 A0A1W2PRG0 241 aa11.99□□□□□ -0.49
LIN54-203ENST00000446851 NDUFB10O96000 172 aa11.99□□□□□ -0.49
LIN54-203ENST00000446851 HMGB1P09429 215 aaKnown RBP11.99□□□□□ -0.49
LIN54-203ENST00000446851 TOP1P11387 765 aaKnown RBP11.99□□□□□ -0.49
LIN54-203ENST00000446851 OSBPP22059 807 aa11.99□□□□□ -0.49
LIN54-203ENST00000446851 HSPA4P34932 840 aa11.99□□□□□ -0.49
LIN54-203ENST00000446851 PABPC4Q13310 644 aaKnown RBP eCLIP11.99□□□□□ -0.49
LIN54-203ENST00000446851 MCTP1Q6DN14 999 aa11.99□□□□□ -0.49
LIN54-203ENST00000446851 ENAHQ8N8S7 591 aaPredicted RBP11.99□□□□□ -0.49
LIN54-203ENST00000446851 NEDD1Q8NHV4 660 aa11.99□□□□□ -0.49
LIN54-203ENST00000446851 FOXP2O15409 715 aa11.99□□□□□ -0.49
LIN54-203ENST00000446851 ALX1Q15699 326 aa11.99□□□□□ -0.49
LIN54-203ENST00000446851 PPATQ06203 517 aa11.98□□□□□ -0.49
LIN54-203ENST00000446851 COL9A3Q14050 684 aaPredicted RBP11.98□□□□□ -0.49
LIN54-203ENST00000446851 TREML2Q5T2D2 321 aa11.98□□□□□ -0.49
LIN54-203ENST00000446851 CCDC83Q8IWF9 413 aa11.98□□□□□ -0.49
LIN54-203ENST00000446851 PGAP2Q9UHJ9 254 aa11.98□□□□□ -0.49
LIN54-203ENST00000446851 KIF22Q14807 665 aa11.98□□□□□ -0.49
LIN54-203ENST00000446851 EHD4Q9H223 541 aa11.98□□□□□ -0.49
LIN54-203ENST00000446851 BRCA1P38398 1863 aaKnown RBP11.98□□□□□ -0.49
LIN54-203ENST00000446851 SPDYE5A6NIY4 337 aa11.98□□□□□ -0.49
LIN54-203ENST00000446851 GUCY1B3Q02153 619 aa11.98□□□□□ -0.49
LIN54-203ENST00000446851 RTN1Q16799 776 aa11.98□□□□□ -0.49
LIN54-203ENST00000446851 HEATR3Q7Z4Q2 680 aa11.98□□□□□ -0.49
LIN54-203ENST00000446851 ZNF654Q8IZM8 581 aa11.98□□□□□ -0.49
LIN54-203ENST00000446851 SLC26A6Q9BXS9 759 aa11.98□□□□□ -0.49
LIN54-203ENST00000446851 KIAA1551Q9HCM1 1747 aa11.97□□□□□ -0.49
LIN54-203ENST00000446851 KLRF2D3W0D1 207 aa11.97□□□□□ -0.49
LIN54-203ENST00000446851 TAL1P17542 331 aaPredicted RBP11.97□□□□□ -0.49
LIN54-203ENST00000446851 KIF5BP33176 963 aa11.97□□□□□ -0.49
LIN54-203ENST00000446851 RAVER2Q9HCJ3 691 aaKnown RBP11.97□□□□□ -0.49
LIN54-203ENST00000446851 PTPDC1A2A3K4 754 aa11.97□□□□□ -0.49
LIN54-203ENST00000446851 MANSC4A6NHS7 340 aaPredicted RBP11.97□□□□□ -0.49
LIN54-203ENST00000446851 BTBD19C9JJ37 291 aa11.97□□□□□ -0.49
LIN54-203ENST00000446851 VCAM1P19320 739 aa11.97□□□□□ -0.49
LIN54-203ENST00000446851 RASAL3Q86YV0 1011 aa11.97□□□□□ -0.49
LIN54-203ENST00000446851 FAM43AQ8N2R8 423 aa11.97□□□□□ -0.49
LIN54-203ENST00000446851 PHF20L1A8MW92 1017 aa11.97□□□□□ -0.49
LIN54-203ENST00000446851 ZBED4O75132 1171 aa11.97□□□□□ -0.49
LIN54-203ENST00000446851 ADD1P35611 737 aaKnown RBP11.97□□□□□ -0.49
LIN54-203ENST00000446851 FCHSD1Q86WN1 690 aa11.97□□□□□ -0.49
LIN54-203ENST00000446851 PHKBQ93100 1093 aa11.97□□□□□ -0.49
LIN54-203ENST00000446851 ATG4CQ96DT6 458 aa11.97□□□□□ -0.49
LIN54-203ENST00000446851 ZFYVE28Q9HCC9 887 aa11.97□□□□□ -0.49
LIN54-203ENST00000446851 STAT2P52630 851 aa11.96□□□□□ -0.49
LIN54-203ENST00000446851 RUFY3Q7L099 469 aa11.96□□□□□ -0.49
LIN54-203ENST00000446851 TRMT1LQ7Z2T5 733 aaKnown RBP11.96□□□□□ -0.49
LIN54-203ENST00000446851 BRI3BPQ8WY22 251 aa11.96□□□□□ -0.49
LIN54-203ENST00000446851 UIMC1Q96RL1 719 aa11.96□□□□□ -0.49
LIN54-203ENST00000446851 VCPKMTQ9H867 229 aa11.96□□□□□ -0.49
LIN54-203ENST00000446851 PNMA3Q9UL41 463 aa11.96□□□□□ -0.49
LIN54-203ENST00000446851 DLEC1Q9Y238 1755 aa11.96□□□□□ -0.49
LIN54-203ENST00000446851 LRRC37AA6NMS7 1700 aa11.96□□□□□ -0.49
LIN54-203ENST00000446851 RPAP1Q9BWH6 1393 aaPredicted RBP11.96□□□□□ -0.49
LIN54-203ENST00000446851 IGSF3O75054 1194 aa11.96□□□□□ -0.49
LIN54-203ENST00000446851 RPS6KB1P23443 525 aa11.96□□□□□ -0.49
LIN54-203ENST00000446851 AK2P54819 239 aa11.96□□□□□ -0.49
LIN54-203ENST00000446851 TRIM22Q8IYM9 498 aa11.96□□□□□ -0.49
LIN54-203ENST00000446851 NKX2-3Q8TAU0 364 aa11.96□□□□□ -0.49
LIN54-203ENST00000446851 P2RX7Q99572 595 aaKnown RBP11.96□□□□□ -0.49
LIN54-203ENST00000446851 IL17RBQ9NRM6 502 aa11.96□□□□□ -0.49
LIN54-203ENST00000446851 PPIL2Q13356 520 aa11.96□□□□□ -0.5
LIN54-203ENST00000446851 CHURC1Q8WUH1 139 aa11.96□□□□□ -0.5
LIN54-203ENST00000446851 V9GY48 417 aaPredicted RBP11.96□□□□□ -0.5
LIN54-203ENST00000446851 KIAA0100Q14667 2235 aaKnown RBP11.96□□□□□ -0.5
LIN54-203ENST00000446851 GABPAQ06546 454 aa11.96□□□□□ -0.5
LIN54-203ENST00000446851 CCDC178Q5BJE1 867 aa11.96□□□□□ -0.5
LIN54-203ENST00000446851 PPP4R3BQ5MIZ7 849 aa11.96□□□□□ -0.5
LIN54-203ENST00000446851 ANKRD35Q8N283 1001 aa11.96□□□□□ -0.5
LIN54-203ENST00000446851 TMTC2Q8N394 836 aa11.96□□□□□ -0.5
LIN54-203ENST00000446851 NBPF3Q9H094 633 aa11.96□□□□□ -0.5
LIN54-203ENST00000446851 RFX7Q2KHR2 1363 aa11.95□□□□□ -0.5
LIN54-203ENST00000446851 CFBP00751 764 aa11.95□□□□□ -0.5
LIN54-203ENST00000446851 GJA5P36382 358 aa11.95□□□□□ -0.5
LIN54-203ENST00000446851 STAG2Q8N3U4 1231 aa11.95□□□□□ -0.5
LIN54-203ENST00000446851 USP17L15C9J2P7 530 aa11.95□□□□□ -0.5
LIN54-203ENST00000446851 C19orf81C9J6K1 198 aa11.95□□□□□ -0.5
LIN54-203ENST00000446851 USP17L13C9JLJ4 530 aa11.95□□□□□ -0.5
LIN54-203ENST00000446851 USP17L11C9JVI0 530 aa11.95□□□□□ -0.5
LIN54-203ENST00000446851 USP17L18D6R9N7 530 aa11.95□□□□□ -0.5
LIN54-203ENST00000446851 USP17L22D6RA61 530 aa11.95□□□□□ -0.5
LIN54-203ENST00000446851 USP17L17D6RBQ6 530 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms