RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 CTNND1O60716 968 aaKnown RBP8.86□□□□□ -0.99
SF3A3P1-201ENST00000446317 SLC16A2P36021 539 aa8.86□□□□□ -0.99
SF3A3P1-201ENST00000446317 VASPP50552 380 aaPredicted RBP8.86□□□□□ -0.99
SF3A3P1-201ENST00000446317 ZNF157P51786 506 aaPredicted RBP8.86□□□□□ -0.99
SF3A3P1-201ENST00000446317 HMGCS2P54868 508 aa8.86□□□□□ -0.99
SF3A3P1-201ENST00000446317 SEC23AQ15436 765 aa8.86□□□□□ -0.99
SF3A3P1-201ENST00000446317 TTBK2Q6IQ55 1244 aa8.86□□□□□ -0.99
SF3A3P1-201ENST00000446317 CYP4F22Q6NT55 531 aa8.86□□□□□ -0.99
SF3A3P1-201ENST00000446317 CCDC83Q8IWF9 413 aa8.86□□□□□ -0.99
SF3A3P1-201ENST00000446317 RBM46Q8TBY0 533 aaKnown RBP8.86□□□□□ -0.99
SF3A3P1-201ENST00000446317 HOOK2Q96ED9 719 aa8.86□□□□□ -0.99
SF3A3P1-201ENST00000446317 ZIC5Q96T25 663 aa8.86□□□□□ -0.99
SF3A3P1-201ENST00000446317 VAT1LQ9HCJ6 419 aa8.86□□□□□ -0.99
SF3A3P1-201ENST00000446317 ZNF112Q9UJU3 913 aa8.86□□□□□ -0.99
SF3A3P1-201ENST00000446317 PASKQ96RG2 1323 aa8.86□□□□□ -0.99
SF3A3P1-201ENST00000446317 GOLGA8AA7E2F4 631 aa8.85□□□□□ -0.99
SF3A3P1-201ENST00000446317 AOC2O75106 756 aa8.85□□□□□ -0.99
SF3A3P1-201ENST00000446317 PLEKHA8P1O95397 391 aa8.85□□□□□ -0.99
SF3A3P1-201ENST00000446317 TTLL1O95922 423 aa8.85□□□□□ -0.99
SF3A3P1-201ENST00000446317 MAP3K10Q02779 954 aa8.85□□□□□ -0.99
SF3A3P1-201ENST00000446317 IKQ13123 557 aaPredicted RBP8.85□□□□□ -0.99
SF3A3P1-201ENST00000446317 SART3Q15020 963 aaKnown RBP8.85□□□□□ -0.99
SF3A3P1-201ENST00000446317 ME3Q16798 604 aa8.85□□□□□ -0.99
SF3A3P1-201ENST00000446317 FAM83BQ5T0W9 1011 aa8.85□□□□□ -0.99
SF3A3P1-201ENST00000446317 IFNLR1Q8IU57 520 aaPredicted RBP8.85□□□□□ -0.99
SF3A3P1-201ENST00000446317 ANKRD13AQ8IZ07 590 aa8.85□□□□□ -0.99
SF3A3P1-201ENST00000446317 ZNF654Q8IZM8 581 aa8.85□□□□□ -0.99
SF3A3P1-201ENST00000446317 STAG2Q8N3U4 1231 aa8.85□□□□□ -0.99
SF3A3P1-201ENST00000446317 PNMA1Q8ND90 353 aa8.85□□□□□ -0.99
SF3A3P1-201ENST00000446317 CCDC17Q96LX7 622 aa8.85□□□□□ -0.99
SF3A3P1-201ENST00000446317 TM6SF1Q9BZW5 370 aa8.85□□□□□ -0.99
SF3A3P1-201ENST00000446317 UBA5Q9GZZ9 404 aa8.85□□□□□ -0.99
SF3A3P1-201ENST00000446317 SLC12A7Q9Y666 1083 aa8.85□□□□□ -0.99
SF3A3P1-201ENST00000446317 ATAD5Q96QE3 1844 aa8.85□□□□□ -0.99
SF3A3P1-201ENST00000446317 MYH8P13535 1937 aa8.85□□□□□ -0.99
SF3A3P1-201ENST00000446317 TMEM88BA6NKF7 163 aa8.84□□□□□ -0.99
SF3A3P1-201ENST00000446317 IRF6O14896 467 aa8.84□□□□□ -0.99
SF3A3P1-201ENST00000446317 ZBTB43O43298 467 aa8.84□□□□□ -0.99
SF3A3P1-201ENST00000446317 EPB41L2O43491 1005 aaKnown RBP8.84□□□□□ -0.99
SF3A3P1-201ENST00000446317 ST18O60284 1047 aa8.84□□□□□ -0.99
SF3A3P1-201ENST00000446317 NDUFB10O96000 172 aa8.84□□□□□ -0.99
SF3A3P1-201ENST00000446317 ASNSP08243 561 aa8.84□□□□□ -0.99
SF3A3P1-201ENST00000446317 HMGB1P09429 215 aaKnown RBP8.84□□□□□ -0.99
SF3A3P1-201ENST00000446317 CDC27P30260 824 aa8.84□□□□□ -0.99
SF3A3P1-201ENST00000446317 ADD1P35611 737 aaKnown RBP8.84□□□□□ -0.99
SF3A3P1-201ENST00000446317 ST3GAL1Q11201 340 aa8.84□□□□□ -0.99
SF3A3P1-201ENST00000446317 TREML2Q5T2D2 321 aa8.84□□□□□ -0.99
SF3A3P1-201ENST00000446317 SLFN13Q68D06 897 aa8.84□□□□□ -0.99
SF3A3P1-201ENST00000446317 CATIPQ7Z7H3 387 aa8.84□□□□□ -0.99
SF3A3P1-201ENST00000446317 DDX11Q96FC9 970 aa8.84□□□□□ -0.99
SF3A3P1-201ENST00000446317 WNK4Q96J92 1243 aa8.84□□□□□ -0.99
SF3A3P1-201ENST00000446317 TMEM87BQ96K49 555 aa8.84□□□□□ -0.99
SF3A3P1-201ENST00000446317 TBC1D2Q9BYX2 928 aa8.84□□□□□ -0.99
SF3A3P1-201ENST00000446317 KANSL2Q9H9L4 492 aa8.84□□□□□ -0.99
SF3A3P1-201ENST00000446317 ARHGEF10LQ9HCE6 1279 aa8.84□□□□□ -0.99
SF3A3P1-201ENST00000446317 FBXO28Q9NVF7 368 aa8.84□□□□□ -0.99
SF3A3P1-201ENST00000446317 DOCK1Q14185 1865 aa8.84□□□□□ -0.99
SF3A3P1-201ENST00000446317 F5H6K3 240 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 DHX16O60231 1041 aaKnown RBP8.83□□□□□ -1
SF3A3P1-201ENST00000446317 JAK2O60674 1132 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 TOP1P11387 765 aaKnown RBP8.83□□□□□ -1
SF3A3P1-201ENST00000446317 PDIA3P30101 505 aaKnown RBP8.83□□□□□ -1
SF3A3P1-201ENST00000446317 METAP2P50579 478 aaKnown RBP eCLIP8.83□□□□□ -1
SF3A3P1-201ENST00000446317 KLRC3Q07444 240 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 SCRN1Q12765 414 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 LDLRAD1Q5T700 205 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 APOA5Q6Q788 366 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 NBPF11Q86T75 865 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 SAPCD2Q86UD0 394 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 RASAL3Q86YV0 1011 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 HSCBQ8IWL3 235 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 ZNF280CQ8ND82 737 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 PHKBQ93100 1093 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 TMX3Q96JJ7 454 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 TANGO6Q9C0B7 1094 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 EMILIN3Q9NT22 766 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 HPS5Q9UPZ3 1129 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 AFG3L2Q9Y4W6 797 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 PAPPA2Q9BXP8 1791 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 SPDYE5A6NIY4 337 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 USP17L10C9JJH3 530 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 PCP11498 1178 aaKnown RBP8.83□□□□□ -1
SF3A3P1-201ENST00000446317 ANP32AP39687 249 aaKnown RBP8.83□□□□□ -1
SF3A3P1-201ENST00000446317 RTN1Q16799 776 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 NOL9Q5SY16 702 aaKnown RBP8.83□□□□□ -1
SF3A3P1-201ENST00000446317 FOXD4L5Q5VV16 416 aaPredicted RBP8.83□□□□□ -1
SF3A3P1-201ENST00000446317 SYNE3Q6ZMZ3 975 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 HOMER1Q86YM7 354 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 FOXD4L4Q8WXT5 416 aaPredicted RBP8.83□□□□□ -1
SF3A3P1-201ENST00000446317 KIFC2Q96AC6 838 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 SLKQ9H2G2 1235 aaPredicted RBP8.83□□□□□ -1
SF3A3P1-201ENST00000446317 RPAP3Q9H6T3 665 aaPredicted RBP8.83□□□□□ -1
SF3A3P1-201ENST00000446317 TCP11L1Q9NUJ3 509 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 NYAP2Q9P242 653 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 LIMCH1Q9UPQ0 1083 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 TLL2Q9Y6L7 1015 aa8.83□□□□□ -1
SF3A3P1-201ENST00000446317 PLIN4Q96Q06 1357 aa8.82□□□□□ -1
SF3A3P1-201ENST00000446317 SPDYE4A6NLX3 237 aa8.82□□□□□ -1
SF3A3P1-201ENST00000446317 TMEM232C9JQI7 657 aa8.82□□□□□ -1
SF3A3P1-201ENST00000446317 PDHBP11177 359 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms