RNA–Protein interactions for RNA: ENST00000446276.5

MACF1-208, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-208ENST00000446276 SYNE3Q6ZMZ3 975 aa13.8□□□□□ -0.2
MACF1-208ENST00000446276 CATIPQ7Z7H3 387 aa13.8□□□□□ -0.2
MACF1-208ENST00000446276 HSCBQ8IWL3 235 aa13.8□□□□□ -0.2
MACF1-208ENST00000446276 WDR18Q9BV38 432 aa13.8□□□□□ -0.2
MACF1-208ENST00000446276 ARHGEF10LQ9HCE6 1279 aa13.8□□□□□ -0.2
MACF1-208ENST00000446276 SH2B1Q9NRF2 756 aaPredicted RBP13.8□□□□□ -0.2
MACF1-208ENST00000446276 PAPPA2Q9BXP8 1791 aa13.8□□□□□ -0.2
MACF1-208ENST00000446276 K7ELQ4 463 aaPredicted RBP13.8□□□□□ -0.2
MACF1-208ENST00000446276 ATP2B2Q01814 1243 aa13.8□□□□□ -0.2
MACF1-208ENST00000446276 FSTL1Q12841 308 aa13.8□□□□□ -0.2
MACF1-208ENST00000446276 CCDC84Q86UT8 332 aaPredicted RBP13.8□□□□□ -0.2
MACF1-208ENST00000446276 TMX3Q96JJ7 454 aa13.8□□□□□ -0.2
MACF1-208ENST00000446276 TMX2Q9Y320 296 aa13.8□□□□□ -0.2
MACF1-208ENST00000446276 ZBTB43O43298 467 aa13.79□□□□□ -0.2
MACF1-208ENST00000446276 DDAH1O94760 285 aa13.79□□□□□ -0.2
MACF1-208ENST00000446276 ACER1Q8TDN7 264 aa13.79□□□□□ -0.2
MACF1-208ENST00000446276 NAP1L5Q96NT1 182 aaPredicted RBP13.79□□□□□ -0.2
MACF1-208ENST00000446276 AS3MTQ9HBK9 375 aa13.79□□□□□ -0.2
MACF1-208ENST00000446276 HPS5Q9UPZ3 1129 aa13.79□□□□□ -0.2
MACF1-208ENST00000446276 ZHX2Q9Y6X8 837 aa13.79□□□□□ -0.2
MACF1-208ENST00000446276 DOCK1Q14185 1865 aa13.79□□□□□ -0.2
MACF1-208ENST00000446276 PFKFB2O60825 505 aa13.79□□□□□ -0.2
MACF1-208ENST00000446276 LARGE1O95461 756 aa13.79□□□□□ -0.2
MACF1-208ENST00000446276 CALM1P0DP23 149 aa13.79□□□□□ -0.2
MACF1-208ENST00000446276 CALM2P0DP24 149 aa13.79□□□□□ -0.2
MACF1-208ENST00000446276 CALM3P0DP25 149 aa13.79□□□□□ -0.2
MACF1-208ENST00000446276 ECE1P42892 770 aa13.79□□□□□ -0.2
MACF1-208ENST00000446276 BECN1Q14457 450 aa13.79□□□□□ -0.2
MACF1-208ENST00000446276 LRRC47Q8N1G4 583 aaKnown RBP13.79□□□□□ -0.2
MACF1-208ENST00000446276 CLMNQ96JQ2 1002 aa13.79□□□□□ -0.2
MACF1-208ENST00000446276 MAP3K14Q99558 947 aa13.79□□□□□ -0.2
MACF1-208ENST00000446276 SH2D4AQ9H788 454 aa13.79□□□□□ -0.2
MACF1-208ENST00000446276 GOLGA8BA8MQT2 603 aa13.78□□□□□ -0.2
MACF1-208ENST00000446276 MICU3Q86XE3 530 aa13.78□□□□□ -0.2
MACF1-208ENST00000446276 ERO1BQ86YB8 467 aa13.78□□□□□ -0.2
MACF1-208ENST00000446276 ZNF280CQ8ND82 737 aa13.78□□□□□ -0.2
MACF1-208ENST00000446276 MYL10Q9BUA6 226 aa13.78□□□□□ -0.2
MACF1-208ENST00000446276 NID2Q14112 1375 aa13.78□□□□□ -0.2
MACF1-208ENST00000446276 ATAD5Q96QE3 1844 aa13.78□□□□□ -0.2
MACF1-208ENST00000446276 SPDYE5A6NIY4 337 aa13.78□□□□□ -0.2
MACF1-208ENST00000446276 PPATQ06203 517 aa13.78□□□□□ -0.2
MACF1-208ENST00000446276 GMCL1P1Q8NEA9 526 aa13.78□□□□□ -0.2
MACF1-208ENST00000446276 KIAA1683Q9H0B3 1180 aa13.78□□□□□ -0.2
MACF1-208ENST00000446276 SLKQ9H2G2 1235 aaPredicted RBP13.78□□□□□ -0.2
MACF1-208ENST00000446276 ELP3Q9H9T3 547 aa13.78□□□□□ -0.2
MACF1-208ENST00000446276 NAP1L2Q9ULW6 460 aaPredicted RBP13.78□□□□□ -0.2
MACF1-208ENST00000446276 AFG3L2Q9Y4W6 797 aa13.78□□□□□ -0.2
MACF1-208ENST00000446276 SNHG28P0DPA3 235 aa13.78□□□□□ -0.2
MACF1-208ENST00000446276 METAP2P50579 478 aaKnown RBP eCLIP13.78□□□□□ -0.2
MACF1-208ENST00000446276 PPP2R5BQ15173 497 aa13.78□□□□□ -0.2
MACF1-208ENST00000446276 FANCBQ8NB91 859 aa13.78□□□□□ -0.2
MACF1-208ENST00000446276 PRDM4Q9UKN5 801 aa13.78□□□□□ -0.2
MACF1-208ENST00000446276 OTOFQ9HC10 1997 aa13.77□□□□□ -0.2
MACF1-208ENST00000446276 USP17L10C9JJH3 530 aa13.77□□□□□ -0.21
MACF1-208ENST00000446276 F5H6K3 240 aa13.77□□□□□ -0.21
MACF1-208ENST00000446276 RXRAP19793 462 aa13.77□□□□□ -0.21
MACF1-208ENST00000446276 KLRC3Q07444 240 aa13.77□□□□□ -0.21
MACF1-208ENST00000446276 SPP2Q13103 211 aa13.77□□□□□ -0.21
MACF1-208ENST00000446276 STK3Q13188 491 aa13.77□□□□□ -0.21
MACF1-208ENST00000446276 NUP133Q8WUM0 1156 aa13.77□□□□□ -0.21
MACF1-208ENST00000446276 GTF3C6Q969F1 213 aa13.77□□□□□ -0.21
MACF1-208ENST00000446276 SLC10A4Q96EP9 437 aa13.77□□□□□ -0.21
MACF1-208ENST00000446276 VCPKMTQ9H867 229 aa13.77□□□□□ -0.21
MACF1-208ENST00000446276 TRPM7Q96QT4 1865 aa13.77□□□□□ -0.21
MACF1-208ENST00000446276 GOLGA8AA7E2F4 631 aa13.77□□□□□ -0.21
MACF1-208ENST00000446276 PDHBP11177 359 aa13.77□□□□□ -0.21
MACF1-208ENST00000446276 BACE1P56817 501 aa13.77□□□□□ -0.21
MACF1-208ENST00000446276 SCRN1Q12765 414 aa13.77□□□□□ -0.21
MACF1-208ENST00000446276 CUL4AQ13619 759 aa13.77□□□□□ -0.21
MACF1-208ENST00000446276 RAB11FIP4Q86YS3 637 aa13.77□□□□□ -0.21
MACF1-208ENST00000446276 NECAB1Q8N987 351 aa13.77□□□□□ -0.21
MACF1-208ENST00000446276 GOPCQ9HD26 462 aa13.77□□□□□ -0.21
MACF1-208ENST00000446276 FAM217BQ9NTX9 383 aaPredicted RBP13.77□□□□□ -0.21
MACF1-208ENST00000446276 USP14P54578 494 aa13.76□□□□□ -0.21
MACF1-208ENST00000446276 CCT2P78371 535 aaKnown RBP13.76□□□□□ -0.21
MACF1-208ENST00000446276 ST3GAL1Q11201 340 aa13.76□□□□□ -0.21
MACF1-208ENST00000446276 GRM4Q14833 912 aa13.76□□□□□ -0.21
MACF1-208ENST00000446276 SLFN13Q68D06 897 aa13.76□□□□□ -0.21
MACF1-208ENST00000446276 CNKSR2Q8WXI2 1034 aa13.76□□□□□ -0.21
MACF1-208ENST00000446276 CHMP4CQ96CF2 233 aa13.76□□□□□ -0.21
MACF1-208ENST00000446276 GMCL1Q96IK5 515 aa13.76□□□□□ -0.21
MACF1-208ENST00000446276 FEZ1Q99689 392 aa13.76□□□□□ -0.21
MACF1-208ENST00000446276 CCDC196A0A1B0GTZ2 297 aa13.76□□□□□ -0.21
MACF1-208ENST00000446276 C19orf81C9J6K1 198 aa13.76□□□□□ -0.21
MACF1-208ENST00000446276 NDUFB10O96000 172 aa13.76□□□□□ -0.21
MACF1-208ENST00000446276 CDC27P30260 824 aa13.76□□□□□ -0.21
MACF1-208ENST00000446276 KIF5BP33176 963 aa13.76□□□□□ -0.21
MACF1-208ENST00000446276 HUNKP57058 714 aa13.76□□□□□ -0.21
MACF1-208ENST00000446276 PPIL2Q13356 520 aa13.76□□□□□ -0.21
MACF1-208ENST00000446276 RTN1Q16799 776 aa13.76□□□□□ -0.21
MACF1-208ENST00000446276 SAPCD2Q86UD0 394 aa13.76□□□□□ -0.21
MACF1-208ENST00000446276 CTCFLQ8NI51 663 aaPredicted RBP13.76□□□□□ -0.21
MACF1-208ENST00000446276 DCAF4Q8WV16 495 aa13.76□□□□□ -0.21
MACF1-208ENST00000446276 MYH4Q9Y623 1939 aa13.75□□□□□ -0.21
MACF1-208ENST00000446276 PALM3A6NDB9 673 aaPredicted RBP13.75□□□□□ -0.21
MACF1-208ENST00000446276 TRIM75PA6NK02 468 aa13.75□□□□□ -0.21
MACF1-208ENST00000446276 DHX16O60231 1041 aaKnown RBP13.75□□□□□ -0.21
MACF1-208ENST00000446276 ADD1P35611 737 aaKnown RBP13.75□□□□□ -0.21
MACF1-208ENST00000446276 MTMR2Q13614 643 aa13.75□□□□□ -0.21
MACF1-208ENST00000446276 CCDC144CPQ8IYA2 1237 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms