RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 DNAJC8O75937 253 aaPredicted RBP8.71□□□□□ -1.02
SMG1-202ENST00000446231 RETREG2Q8NC44 543 aa8.71□□□□□ -1.02
SMG1-202ENST00000446231 ZNF827Q17R98 1081 aa8.71□□□□□ -1.02
SMG1-202ENST00000446231 GLE1Q53GS7 698 aaKnown RBP8.71□□□□□ -1.02
SMG1-202ENST00000446231 SLC9C2Q5TAH2 1124 aa8.71□□□□□ -1.02
SMG1-202ENST00000446231 LSM14BQ9BX40 385 aaKnown RBP8.71□□□□□ -1.02
SMG1-202ENST00000446231 EVI5O60447 810 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 GSDMBQ8TAX9 411 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 KCNK3O14649 394 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 AEBP2Q6ZN18 517 aaPredicted RBP8.7□□□□□ -1.02
SMG1-202ENST00000446231 FUT8Q9BYC5 575 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 ZPR1O75312 459 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 CCDC92Q53HC0 331 aaPredicted RBP8.7□□□□□ -1.02
SMG1-202ENST00000446231 GOLPH3LQ9H4A5 285 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 ABCC2Q92887 1545 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 TATP17735 454 aaPredicted RBP8.7□□□□□ -1.02
SMG1-202ENST00000446231 USHBP1Q8N6Y0 703 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 COG1Q8WTW3 980 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 PIK3R5Q8WYR1 880 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 CTTNBP2NLQ9P2B4 639 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 ZNF76P36508 570 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 POLA2Q14181 598 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 BEND3Q5T5X7 828 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 GSTA5Q7RTV2 222 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 NFU1Q9UMS0 254 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 DESP17661 470 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 RXRAP19793 462 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 GSPT2Q8IYD1 628 aaKnown RBP8.7□□□□□ -1.02
SMG1-202ENST00000446231 TNFAIP3P21580 790 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 CTNNA2P26232 953 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 TNNI3KQ59H18 835 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 KCNJ14Q9UNX9 436 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 FPGT-TNNI3KV9GXZ4 949 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 GTPBP6O43824 516 aaPredicted RBP8.7□□□□□ -1.02
SMG1-202ENST00000446231 RASSF7Q02833 373 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 ECT2Q9H8V3 914 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 LARGE1O95461 756 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 DTHD1Q6ZMT9 781 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 PLEKHG2Q9H7P9 1386 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 SLC7A5Q01650 507 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 PDCD2Q16342 344 aaPredicted RBP8.7□□□□□ -1.02
SMG1-202ENST00000446231 NBPF6Q5VWK0 638 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 NCAPH2Q6IBW4 605 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 NBPF5PQ86XG9 351 aaPredicted RBP8.7□□□□□ -1.02
SMG1-202ENST00000446231 NBPF4Q96M43 638 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 CUL1Q13616 776 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 PARP3Q9Y6F1 533 aa8.7□□□□□ -1.02
SMG1-202ENST00000446231 SLC8A3P57103 927 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 SUGP1Q8IWZ8 645 aaKnown RBP8.69□□□□□ -1.02
SMG1-202ENST00000446231 FAF1Q9UNN5 650 aaPredicted RBP8.69□□□□□ -1.02
SMG1-202ENST00000446231 NUDCD1Q96RS6 583 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 THEGQ9P2T0 379 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 ADGRG1Q9Y653 693 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 EEF2P13639 858 aaKnown RBP8.69□□□□□ -1.02
SMG1-202ENST00000446231 KRT31Q15323 416 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 HEATR3Q7Z4Q2 680 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 IL17RAQ96F46 866 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 G3V3G9 751 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 DCAF8Q5TAQ9 597 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 ANKRD13DQ6ZTN6 518 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 NCOA3Q9Y6Q9 1424 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 HEXIM1O94992 359 aaKnown RBP8.69□□□□□ -1.02
SMG1-202ENST00000446231 PDHA1P08559 390 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 ATP5JP18859 108 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 GNAT2P19087 354 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 STX2P32856 288 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 DIS3L2Q8IYB7 885 aaKnown RBP8.69□□□□□ -1.02
SMG1-202ENST00000446231 THOC1Q96FV9 657 aaKnown RBP8.69□□□□□ -1.02
SMG1-202ENST00000446231 RPAP1Q9BWH6 1393 aaPredicted RBP8.69□□□□□ -1.02
SMG1-202ENST00000446231 CCDC110Q8TBZ0 833 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 MAGI2Q86UL8 1455 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 GNAQP50148 359 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 PDE1CQ14123 709 aaPredicted RBP8.69□□□□□ -1.02
SMG1-202ENST00000446231 DSCC1Q9BVC3 393 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 Q9H521 79 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 HDAC9Q9UKV0 1011 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 HSP90AA5PQ58FG0 334 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 BATF3Q9NR55 127 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 B4DLN1 442 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 CALM1P0DP23 149 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 CALM2P0DP24 149 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 CALM3P0DP25 149 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 PNKPQ96T60 521 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 DIAPH2O60879 1101 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 LSP1P33241 339 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 CUL3Q13618 768 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 CCDC13Q8IYE1 715 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 SLC40A1Q9NP59 571 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 RP1L1Q8IWN7 2480 aaPredicted RBP8.69□□□□□ -1.02
SMG1-202ENST00000446231 CYP27A1Q02318 531 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 TEX9Q8N6V9 391 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 HAUS7Q99871 368 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 RTL9Q8NET4 1388 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 CCT8L1PA6NM43 557 aa8.69□□□□□ -1.02
SMG1-202ENST00000446231 FMR1NBQ8N0W7 255 aaPredicted RBP8.69□□□□□ -1.02
SMG1-202ENST00000446231 TMEM232C9JQI7 657 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 PRPF38AQ8NAV1 312 aaKnown RBP8.68□□□□□ -1.02
SMG1-202ENST00000446231 OSBPL1AQ9BXW6 950 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 IQCGQ9H095 443 aaKnown RBP8.68□□□□□ -1.02
SMG1-202ENST00000446231 TSPYL2Q9H2G4 693 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms