RNA–Protein interactions for RNA: ENST00000446008.5

UBE2D4-206, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2 BASIC

Gene UBE2D4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-206ENST00000446008 MAFAQ8NHW3 353 aaPredicted RBP12.16□□□□□ -0.46
UBE2D4-206ENST00000446008 SH3RF3Q8TEJ3 882 aaPredicted RBP12.16□□□□□ -0.46
UBE2D4-206ENST00000446008 C12orf42Q96LP6 360 aa12.16□□□□□ -0.46
UBE2D4-206ENST00000446008 PAGR1Q9BTK6 254 aa12.16□□□□□ -0.46
UBE2D4-206ENST00000446008 KRTAP3-3Q9BYR6 98 aa12.16□□□□□ -0.46
UBE2D4-206ENST00000446008 KRTAP3-2Q9BYR7 98 aa12.16□□□□□ -0.46
UBE2D4-206ENST00000446008 FLRT1Q9NZU1 646 aa12.16□□□□□ -0.46
UBE2D4-206ENST00000446008 RAI14Q9P0K7 980 aa12.16□□□□□ -0.46
UBE2D4-206ENST00000446008 TTC28Q96AY4 2481 aa12.15□□□□□ -0.46
UBE2D4-206ENST00000446008 SLC15A5A6NIM6 579 aa12.15□□□□□ -0.46
UBE2D4-206ENST00000446008 E9PSI1 815 aa12.15□□□□□ -0.46
UBE2D4-206ENST00000446008 CNMDO75829 334 aa12.15□□□□□ -0.46
UBE2D4-206ENST00000446008 IGHA2P01877 340 aa12.15□□□□□ -0.46
UBE2D4-206ENST00000446008 PTPREP23469 700 aa12.15□□□□□ -0.46
UBE2D4-206ENST00000446008 CCNA1P78396 465 aa12.15□□□□□ -0.46
UBE2D4-206ENST00000446008 SMAD3P84022 425 aaKnown RBP12.15□□□□□ -0.46
UBE2D4-206ENST00000446008 SHHQ15465 462 aa12.15□□□□□ -0.46
UBE2D4-206ENST00000446008 PI16Q6UXB8 463 aa12.15□□□□□ -0.46
UBE2D4-206ENST00000446008 SYMPKQ92797 1274 aaKnown RBP12.15□□□□□ -0.46
UBE2D4-206ENST00000446008 NOL10Q9BSC4 688 aaKnown RBP12.15□□□□□ -0.46
UBE2D4-206ENST00000446008 ZBTB21Q9ULJ3 1066 aa12.15□□□□□ -0.46
UBE2D4-206ENST00000446008 USP17L15C9J2P7 530 aa12.14□□□□□ -0.47
UBE2D4-206ENST00000446008 USP17L13C9JLJ4 530 aa12.14□□□□□ -0.47
UBE2D4-206ENST00000446008 USP17L11C9JVI0 530 aa12.14□□□□□ -0.47
UBE2D4-206ENST00000446008 USP17L18D6R9N7 530 aa12.14□□□□□ -0.47
UBE2D4-206ENST00000446008 USP17L22D6RA61 530 aa12.14□□□□□ -0.47
UBE2D4-206ENST00000446008 USP17L17D6RBQ6 530 aa12.14□□□□□ -0.47
UBE2D4-206ENST00000446008 USP17L19D6RCP7 530 aa12.14□□□□□ -0.47
UBE2D4-206ENST00000446008 USP17L20D6RJB6 530 aa12.14□□□□□ -0.47
UBE2D4-206ENST00000446008 GDF11O95390 407 aa12.14□□□□□ -0.47
UBE2D4-206ENST00000446008 BAG3O95817 575 aa12.14□□□□□ -0.47
UBE2D4-206ENST00000446008 ATP2B2Q01814 1243 aa12.14□□□□□ -0.47
UBE2D4-206ENST00000446008 USP17L24Q0WX57 530 aa12.14□□□□□ -0.47
UBE2D4-206ENST00000446008 MTX1Q13505 466 aa12.14□□□□□ -0.47
UBE2D4-206ENST00000446008 SHROOM1Q2M3G4 852 aaPredicted RBP12.14□□□□□ -0.47
UBE2D4-206ENST00000446008 LBX2Q6XYB7 198 aa12.14□□□□□ -0.47
UBE2D4-206ENST00000446008 SLC39A5Q6ZMH5 540 aa12.14□□□□□ -0.47
UBE2D4-206ENST00000446008 NEUROD6Q96NK8 337 aa12.14□□□□□ -0.47
UBE2D4-206ENST00000446008 TTYH1Q9H313 450 aaPredicted RBP12.14□□□□□ -0.47
UBE2D4-206ENST00000446008 CWC22Q9HCG8 908 aaKnown RBP12.14□□□□□ -0.47
UBE2D4-206ENST00000446008 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.14□□□□□ -0.47
UBE2D4-206ENST00000446008 TMEM265A0A087WTH1 108 aa12.13□□□□□ -0.47
UBE2D4-206ENST00000446008 IGSF3O75054 1194 aa12.13□□□□□ -0.47
UBE2D4-206ENST00000446008 PBX2P40425 430 aa12.13□□□□□ -0.47
UBE2D4-206ENST00000446008 MCAMP43121 646 aa12.13□□□□□ -0.47
UBE2D4-206ENST00000446008 GRB14Q14449 540 aa12.13□□□□□ -0.47
UBE2D4-206ENST00000446008 C9orf50Q5SZB4 431 aa12.13□□□□□ -0.47
UBE2D4-206ENST00000446008 CATSPERGQ6ZRH7 1159 aa12.13□□□□□ -0.47
UBE2D4-206ENST00000446008 FAM9BQ8IZU0 186 aa12.13□□□□□ -0.47
UBE2D4-206ENST00000446008 CRACR2BQ8N4Y2 399 aaPredicted RBP12.13□□□□□ -0.47
UBE2D4-206ENST00000446008 ARRDC4Q8NCT1 418 aa12.13□□□□□ -0.47
UBE2D4-206ENST00000446008 NPLOC4Q8TAT6 608 aa12.13□□□□□ -0.47
UBE2D4-206ENST00000446008 TGFBRAP1Q8WUH2 860 aa12.13□□□□□ -0.47
UBE2D4-206ENST00000446008 MYLIPQ8WY64 445 aa12.13□□□□□ -0.47
UBE2D4-206ENST00000446008 SMC4Q9NTJ3 1288 aa12.13□□□□□ -0.47
UBE2D4-206ENST00000446008 AATFQ9NY61 560 aaKnown RBP eCLIP12.13□□□□□ -0.47
UBE2D4-206ENST00000446008 LRP2BPQ9P2M1 347 aa12.13□□□□□ -0.47
UBE2D4-206ENST00000446008 FLT1P17948 1338 aa12.12□□□□□ -0.47
UBE2D4-206ENST00000446008 MYH1P12882 1939 aa12.12□□□□□ -0.47
UBE2D4-206ENST00000446008 ANP32CO43423 234 aa12.12□□□□□ -0.47
UBE2D4-206ENST00000446008 UQCRFS1P1P0C7P4 283 aa12.12□□□□□ -0.47
UBE2D4-206ENST00000446008 CYBAP13498 195 aa12.12□□□□□ -0.47
UBE2D4-206ENST00000446008 CNGA1P29973 690 aa12.12□□□□□ -0.47
UBE2D4-206ENST00000446008 SLFN5Q08AF3 891 aa12.12□□□□□ -0.47
UBE2D4-206ENST00000446008 SNX17Q15036 470 aa12.12□□□□□ -0.47
UBE2D4-206ENST00000446008 GORABQ5T7V8 394 aa12.12□□□□□ -0.47
UBE2D4-206ENST00000446008 C1orf53Q5VUE5 145 aa12.12□□□□□ -0.47
UBE2D4-206ENST00000446008 NAA16Q6N069 864 aaPredicted RBP12.12□□□□□ -0.47
UBE2D4-206ENST00000446008 MAPKAPK5Q8IW41 473 aa12.12□□□□□ -0.47
UBE2D4-206ENST00000446008 TRPV1Q8NER1 839 aa12.12□□□□□ -0.47
UBE2D4-206ENST00000446008 DDX12PQ92771 950 aa12.12□□□□□ -0.47
UBE2D4-206ENST00000446008 MEIS3Q99687 375 aa12.12□□□□□ -0.47
UBE2D4-206ENST00000446008 TRIM34Q9BYJ4 488 aa12.12□□□□□ -0.47
UBE2D4-206ENST00000446008 PALD1Q9ULE6 856 aa12.12□□□□□ -0.47
UBE2D4-206ENST00000446008 ATP11BQ9Y2G3 1177 aa12.12□□□□□ -0.47
UBE2D4-206ENST00000446008 IVNS1ABPQ9Y6Y0 642 aa12.12□□□□□ -0.47
UBE2D4-206ENST00000446008 MYO5AQ9Y4I1 1855 aaKnown RBP12.12□□□□□ -0.47
UBE2D4-206ENST00000446008 SRGAP3O43295 1099 aa12.11□□□□□ -0.47
UBE2D4-206ENST00000446008 CYP2C19P33261 490 aa12.11□□□□□ -0.47
UBE2D4-206ENST00000446008 USP14P54578 494 aa12.11□□□□□ -0.47
UBE2D4-206ENST00000446008 GJC2Q5T442 439 aaPredicted RBP12.11□□□□□ -0.47
UBE2D4-206ENST00000446008 OLFML2BQ68BL8 750 aa12.11□□□□□ -0.47
UBE2D4-206ENST00000446008 TATDN1Q6P1N9 297 aa12.11□□□□□ -0.47
UBE2D4-206ENST00000446008 ATF7IPQ6VMQ6 1270 aa12.11□□□□□ -0.47
UBE2D4-206ENST00000446008 BADQ92934 168 aa12.11□□□□□ -0.47
UBE2D4-206ENST00000446008 ZDHHC16Q969W1 377 aa12.11□□□□□ -0.47
UBE2D4-206ENST00000446008 API5Q9BZZ5 524 aaKnown RBP12.11□□□□□ -0.47
UBE2D4-206ENST00000446008 PDLIM7Q9NR12 457 aa12.11□□□□□ -0.47
UBE2D4-206ENST00000446008 BTBD7Q9P203 1132 aa12.11□□□□□ -0.47
UBE2D4-206ENST00000446008 NOB1Q9ULX3 412 aaKnown RBP12.11□□□□□ -0.47
UBE2D4-206ENST00000446008 PCDHGA10Q9Y5H3 936 aa12.11□□□□□ -0.47
UBE2D4-206ENST00000446008 NDUFB9Q9Y6M9 179 aa12.11□□□□□ -0.47
UBE2D4-206ENST00000446008 SMCHD1A6NHR9 2005 aa12.11□□□□□ -0.47
UBE2D4-206ENST00000446008 ZNF236Q9UL36 1845 aa12.1□□□□□ -0.47
UBE2D4-206ENST00000446008 KBTBD13C9JR72 458 aa12.1□□□□□ -0.47
UBE2D4-206ENST00000446008 STRNO43815 780 aa12.1□□□□□ -0.47
UBE2D4-206ENST00000446008 GH2P01242 217 aa12.1□□□□□ -0.47
UBE2D4-206ENST00000446008 HLA-DOAP06340 250 aa12.1□□□□□ -0.47
UBE2D4-206ENST00000446008 GNAI3P08754 354 aa12.1□□□□□ -0.47
UBE2D4-206ENST00000446008 FOSL2P15408 326 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms