RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 CD2BP2O95400 341 aaKnown RBP20.36■□□□□ 0.85
SGCE-206ENST00000445866 MCM2P49736 904 aa20.36■□□□□ 0.85
SGCE-206ENST00000445866 RAB11FIP4Q86YS3 637 aa20.36■□□□□ 0.85
SGCE-206ENST00000445866 ZNF654Q8IZM8 581 aa20.36■□□□□ 0.85
SGCE-206ENST00000445866 ZNF274Q96GC6 653 aaPredicted RBP20.36■□□□□ 0.85
SGCE-206ENST00000445866 MYL10Q9BUA6 226 aa20.36■□□□□ 0.85
SGCE-206ENST00000445866 KIAA1683Q9H0B3 1180 aa20.36■□□□□ 0.85
SGCE-206ENST00000445866 GOPCQ9HD26 462 aa20.36■□□□□ 0.85
SGCE-206ENST00000445866 TPCN1Q9ULQ1 816 aa20.36■□□□□ 0.85
SGCE-206ENST00000445866 FOCADQ5VW36 1801 aa20.36■□□□□ 0.85
SGCE-206ENST00000445866 CXCL11O14625 94 aa20.35■□□□□ 0.85
SGCE-206ENST00000445866 PDIA3P30101 505 aaKnown RBP20.35■□□□□ 0.85
SGCE-206ENST00000445866 USP14P54578 494 aa20.35■□□□□ 0.85
SGCE-206ENST00000445866 EVCP57679 992 aa20.35■□□□□ 0.85
SGCE-206ENST00000445866 PPIL2Q13356 520 aa20.35■□□□□ 0.85
SGCE-206ENST00000445866 MTMR2Q13614 643 aa20.35■□□□□ 0.85
SGCE-206ENST00000445866 SLFN13Q68D06 897 aa20.35■□□□□ 0.85
SGCE-206ENST00000445866 RGMBQ6NW40 437 aa20.35■□□□□ 0.85
SGCE-206ENST00000445866 APOA5Q6Q788 366 aa20.35■□□□□ 0.85
SGCE-206ENST00000445866 CDK5RAP2Q96SN8 1893 aa20.35■□□□□ 0.85
SGCE-206ENST00000445866 C19orf81C9J6K1 198 aa20.35■□□□□ 0.85
SGCE-206ENST00000445866 ZBTB43O43298 467 aa20.35■□□□□ 0.85
SGCE-206ENST00000445866 MKRN3Q13064 507 aaKnown RBP20.35■□□□□ 0.85
SGCE-206ENST00000445866 STK3Q13188 491 aa20.35■□□□□ 0.85
SGCE-206ENST00000445866 SPICE1Q8N0Z3 855 aa20.35■□□□□ 0.85
SGCE-206ENST00000445866 SYNPO2Q9UMS6 1093 aa20.35■□□□□ 0.85
SGCE-206ENST00000445866 RBM19Q9Y4C8 960 aaKnown RBP20.35■□□□□ 0.85
SGCE-206ENST00000445866 POLR2AP24928 1970 aaKnown RBP20.34■□□□□ 0.85
SGCE-206ENST00000445866 RXRAP19793 462 aa20.34■□□□□ 0.85
SGCE-206ENST00000445866 GJA5P36382 358 aa20.34■□□□□ 0.85
SGCE-206ENST00000445866 TROAPQ12815 778 aa20.34■□□□□ 0.85
SGCE-206ENST00000445866 USP17L2Q6R6M4 530 aa20.34■□□□□ 0.85
SGCE-206ENST00000445866 MICU3Q86XE3 530 aa20.34■□□□□ 0.85
SGCE-206ENST00000445866 GMCL1P1Q8NEA9 526 aa20.34■□□□□ 0.85
SGCE-206ENST00000445866 WNK4Q96J92 1243 aa20.34■□□□□ 0.85
SGCE-206ENST00000445866 ZSCAN31Q96LW9 406 aaPredicted RBP20.34■□□□□ 0.85
SGCE-206ENST00000445866 VCPKMTQ9H867 229 aa20.34■□□□□ 0.85
SGCE-206ENST00000445866 EMILIN3Q9NT22 766 aa20.34■□□□□ 0.85
SGCE-206ENST00000445866 GOLGA8BA8MQT2 603 aa20.33■□□□□ 0.85
SGCE-206ENST00000445866 NDUFB10O96000 172 aa20.33■□□□□ 0.85
SGCE-206ENST00000445866 CALM1P0DP23 149 aa20.33■□□□□ 0.85
SGCE-206ENST00000445866 CALM2P0DP24 149 aa20.33■□□□□ 0.85
SGCE-206ENST00000445866 CALM3P0DP25 149 aa20.33■□□□□ 0.85
SGCE-206ENST00000445866 HMGCS2P54868 508 aa20.33■□□□□ 0.85
SGCE-206ENST00000445866 SPRYD7Q5W111 196 aa20.33■□□□□ 0.85
SGCE-206ENST00000445866 CCDC144CPQ8IYA2 1237 aa20.33■□□□□ 0.85
SGCE-206ENST00000445866 FANCBQ8NB91 859 aa20.33■□□□□ 0.85
SGCE-206ENST00000445866 SNX21Q969T3 373 aa20.33■□□□□ 0.85
SGCE-206ENST00000445866 SLKQ9H2G2 1235 aaPredicted RBP20.33■□□□□ 0.85
SGCE-206ENST00000445866 CREBZFQ9NS37 354 aa20.33■□□□□ 0.85
SGCE-206ENST00000445866 TMOD4Q9NZQ9 345 aa20.33■□□□□ 0.85
SGCE-206ENST00000445866 ISY1Q9ULR0 285 aaKnown RBP20.33■□□□□ 0.85
SGCE-206ENST00000445866 DDAH1O94760 285 aa20.32■□□□□ 0.84
SGCE-206ENST00000445866 CCT2P78371 535 aaKnown RBP20.32■□□□□ 0.84
SGCE-206ENST00000445866 ME3Q16798 604 aa20.32■□□□□ 0.84
SGCE-206ENST00000445866 KIAA1755Q5JYT7 1200 aa20.32■□□□□ 0.84
SGCE-206ENST00000445866 KCNH4Q9UQ05 1017 aa20.32■□□□□ 0.84
SGCE-206ENST00000445866 SIPA1L1O43166 1804 aa20.32■□□□□ 0.84
SGCE-206ENST00000445866 SLC1A4P43007 532 aa20.32■□□□□ 0.84
SGCE-206ENST00000445866 METAP2P50579 478 aaKnown RBP eCLIP20.32■□□□□ 0.84
SGCE-206ENST00000445866 SNAPC2Q13487 334 aa20.32■□□□□ 0.84
SGCE-206ENST00000445866 DGKZQ13574 1117 aa20.32■□□□□ 0.84
SGCE-206ENST00000445866 PAXIP1Q6ZW49 1069 aaPredicted RBP20.32■□□□□ 0.84
SGCE-206ENST00000445866 NECAB1Q8N987 351 aa20.32■□□□□ 0.84
SGCE-206ENST00000445866 CCDC102AQ96A19 550 aa20.32■□□□□ 0.84
SGCE-206ENST00000445866 HPS5Q9UPZ3 1129 aa20.32■□□□□ 0.84
SGCE-206ENST00000445866 GOLGA8AA7E2F4 631 aa20.31■□□□□ 0.84
SGCE-206ENST00000445866 PARP1P09874 1014 aaKnown RBP20.31■□□□□ 0.84
SGCE-206ENST00000445866 PDHBP11177 359 aa20.31■□□□□ 0.84
SGCE-206ENST00000445866 HSCBQ8IWL3 235 aa20.31■□□□□ 0.84
SGCE-206ENST00000445866 CTCFLQ8NI51 663 aaPredicted RBP20.31■□□□□ 0.84
SGCE-206ENST00000445866 DCAF4Q8WV16 495 aa20.31■□□□□ 0.84
SGCE-206ENST00000445866 LPAR1Q92633 364 aa20.31■□□□□ 0.84
SGCE-206ENST00000445866 GMCL1Q96IK5 515 aa20.31■□□□□ 0.84
SGCE-206ENST00000445866 TMX3Q96JJ7 454 aa20.31■□□□□ 0.84
SGCE-206ENST00000445866 HHIPL1Q96JK4 782 aa20.31■□□□□ 0.84
SGCE-206ENST00000445866 NUP88Q99567 741 aaPredicted RBP20.31■□□□□ 0.84
SGCE-206ENST00000445866 PFKFB2O60825 505 aa20.3■□□□□ 0.84
SGCE-206ENST00000445866 GOLGA8HP0CJ92 632 aa20.3■□□□□ 0.84
SGCE-206ENST00000445866 ZBTB48P10074 688 aaPredicted RBP20.3■□□□□ 0.84
SGCE-206ENST00000445866 BMP3P12645 472 aa20.3■□□□□ 0.84
SGCE-206ENST00000445866 KIF5BP33176 963 aa20.3■□□□□ 0.84
SGCE-206ENST00000445866 ADD1P35611 737 aaKnown RBP20.3■□□□□ 0.84
SGCE-206ENST00000445866 GTF2A2P52657 109 aa20.3■□□□□ 0.84
SGCE-206ENST00000445866 CCDC96Q2M329 555 aa20.3■□□□□ 0.84
SGCE-206ENST00000445866 DEFB115Q30KQ5 88 aa20.3■□□□□ 0.84
SGCE-206ENST00000445866 SH3D19Q5HYK7 790 aa20.3■□□□□ 0.84
SGCE-206ENST00000445866 GADL1Q6ZQY3 521 aa20.3■□□□□ 0.84
SGCE-206ENST00000445866 KCTD1Q719H9 257 aa20.3■□□□□ 0.84
SGCE-206ENST00000445866 RASAL3Q86YV0 1011 aa20.3■□□□□ 0.84
SGCE-206ENST00000445866 MAP3K14Q99558 947 aa20.3■□□□□ 0.84
SGCE-206ENST00000445866 GPCPD1Q9NPB8 672 aa20.3■□□□□ 0.84
SGCE-206ENST00000445866 SH2B1Q9NRF2 756 aaPredicted RBP20.3■□□□□ 0.84
SGCE-206ENST00000445866 A0A0G2JLL6 359 aaPredicted RBP20.29■□□□□ 0.84
SGCE-206ENST00000445866 LARGE1O95461 756 aa20.29■□□□□ 0.84
SGCE-206ENST00000445866 ANP32AP39687 249 aaKnown RBP20.29■□□□□ 0.84
SGCE-206ENST00000445866 RCAN1P53805 252 aa20.29■□□□□ 0.84
SGCE-206ENST00000445866 GRM1Q13255 1194 aa20.29■□□□□ 0.84
SGCE-206ENST00000445866 RTN1Q16799 776 aa20.29■□□□□ 0.84
SGCE-206ENST00000445866 RASGRP2Q7LDG7 609 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms