RNA–Protein interactions for RNA: ENST00000445268.5

RPE-213, Transcript of ribulose-5-phosphate-3-epimerase, human

TSL 5 BASIC

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPE-213	ENST00000445268	USP17L13	C9JLJ4	530 aa		11.37	□□□□□ -0.59
RPE-213	ENST00000445268	USP17L11	C9JVI0	530 aa		11.37	□□□□□ -0.59
RPE-213	ENST00000445268	USP17L18	D6R9N7	530 aa		11.37	□□□□□ -0.59
RPE-213	ENST00000445268	USP17L22	D6RA61	530 aa		11.37	□□□□□ -0.59
RPE-213	ENST00000445268	USP17L17	D6RBQ6	530 aa		11.37	□□□□□ -0.59
RPE-213	ENST00000445268	USP17L19	D6RCP7	530 aa		11.37	□□□□□ -0.59
RPE-213	ENST00000445268	USP17L20	D6RJB6	530 aa		11.37	□□□□□ -0.59
RPE-213	ENST00000445268	GTPBP6	O43824	516 aa	Predicted RBP	11.37	□□□□□ -0.59
RPE-213	ENST00000445268	ALDH1L1	O75891	902 aa		11.37	□□□□□ -0.59
RPE-213	ENST00000445268	TAL1	P17542	331 aa	Predicted RBP	11.37	□□□□□ -0.59
RPE-213	ENST00000445268	CYP2C18	P33260	490 aa		11.37	□□□□□ -0.59
RPE-213	ENST00000445268	MECOM	Q03112	1051 aa		11.37	□□□□□ -0.59
RPE-213	ENST00000445268	USP17L24	Q0WX57	530 aa		11.37	□□□□□ -0.59
RPE-213	ENST00000445268	RASGRF1	Q13972	1273 aa		11.37	□□□□□ -0.59
RPE-213	ENST00000445268	ATP2B3	Q16720	1220 aa		11.37	□□□□□ -0.59
RPE-213	ENST00000445268	CSPP1	Q1MSJ5	1256 aa		11.37	□□□□□ -0.59
RPE-213	ENST00000445268	OTOP2	Q7RTS6	562 aa		11.37	□□□□□ -0.59
RPE-213	ENST00000445268	RNF180	Q86T96	592 aa		11.37	□□□□□ -0.59
RPE-213	ENST00000445268	TMEM199	Q8N511	208 aa		11.37	□□□□□ -0.59
RPE-213	ENST00000445268	HLA-C	Q95604	372 aa		11.37	□□□□□ -0.59
RPE-213	ENST00000445268	FAM163A	Q96GL9	167 aa	Predicted RBP	11.37	□□□□□ -0.59
RPE-213	ENST00000445268	FEZ1	Q99689	392 aa		11.37	□□□□□ -0.59
RPE-213	ENST00000445268	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.37	□□□□□ -0.59
RPE-213	ENST00000445268	SRCIN1	Q9C0H9	1055 aa		11.37	□□□□□ -0.59
RPE-213	ENST00000445268	GNL3L	Q9NVN8	582 aa	Known RBP	11.37	□□□□□ -0.59
RPE-213	ENST00000445268	MCM3AP	O60318	1980 aa		11.37	□□□□□ -0.59
RPE-213	ENST00000445268	MYH1	P12882	1939 aa		11.37	□□□□□ -0.59
RPE-213	ENST00000445268	SCN5A	Q14524	2016 aa		11.36	□□□□□ -0.59
RPE-213	ENST00000445268	UMODL1	Q5DID0	1318 aa		11.36	□□□□□ -0.59
RPE-213	ENST00000445268	MYADML2	A6NDP7	307 aa		11.36	□□□□□ -0.59
RPE-213	ENST00000445268	EYA2	O00167	538 aa		11.36	□□□□□ -0.59
RPE-213	ENST00000445268	ADAMTS4	O75173	837 aa		11.36	□□□□□ -0.59
RPE-213	ENST00000445268	NPM3	O75607	178 aa	Known RBP	11.36	□□□□□ -0.59
RPE-213	ENST00000445268	VCAM1	P19320	739 aa		11.36	□□□□□ -0.59
RPE-213	ENST00000445268	ACLY	P53396	1101 aa		11.36	□□□□□ -0.59
RPE-213	ENST00000445268	IRX5	P78411	483 aa	Predicted RBP	11.36	□□□□□ -0.59
RPE-213	ENST00000445268	CATSPERG	Q6ZRH7	1159 aa		11.36	□□□□□ -0.59
RPE-213	ENST00000445268	SLF2	Q8IX21	1173 aa		11.36	□□□□□ -0.59
RPE-213	ENST00000445268	TEX11	Q8IYF3	940 aa		11.36	□□□□□ -0.59
RPE-213	ENST00000445268	ZGPAT	Q8N5A5	531 aa	Known RBP	11.36	□□□□□ -0.59
RPE-213	ENST00000445268	MAML3	Q96JK9	1138 aa		11.36	□□□□□ -0.59
RPE-213	ENST00000445268	C12orf42	Q96LP6	360 aa		11.36	□□□□□ -0.59
RPE-213	ENST00000445268	IL23A	Q9NPF7	189 aa		11.36	□□□□□ -0.59
RPE-213	ENST00000445268	PTPRS	Q13332	1948 aa		11.36	□□□□□ -0.59
RPE-213	ENST00000445268	ROBO3	Q96MS0	1386 aa		11.36	□□□□□ -0.59
RPE-213	ENST00000445268	FANCI	Q9NVI1	1328 aa		11.35	□□□□□ -0.59
RPE-213	ENST00000445268	CACNA1B	Q00975	2339 aa		11.35	□□□□□ -0.59
RPE-213	ENST00000445268	SEMA3E	O15041	775 aa		11.35	□□□□□ -0.59
RPE-213	ENST00000445268	ARHGEF15	O94989	841 aa		11.35	□□□□□ -0.59
RPE-213	ENST00000445268	ERCC3	P19447	782 aa		11.35	□□□□□ -0.59
RPE-213	ENST00000445268	LBX2	Q6XYB7	198 aa		11.35	□□□□□ -0.59
RPE-213	ENST00000445268	ATG9A	Q7Z3C6	839 aa		11.35	□□□□□ -0.59
RPE-213	ENST00000445268	GJD3	Q8N144	294 aa		11.35	□□□□□ -0.59
RPE-213	ENST00000445268	SIL1	Q9H173	461 aa		11.35	□□□□□ -0.59
RPE-213	ENST00000445268	MYO5A	Q9Y4I1	1855 aa	Known RBP	11.35	□□□□□ -0.59
RPE-213	ENST00000445268	C5orf42	Q9H799	3197 aa		11.35	□□□□□ -0.59
RPE-213	ENST00000445268	SYNRG	Q9UMZ2	1314 aa		11.35	□□□□□ -0.59
RPE-213	ENST00000445268	VAMP4	O75379	141 aa		11.34	□□□□□ -0.59
RPE-213	ENST00000445268	GH2	P01242	217 aa		11.34	□□□□□ -0.59
RPE-213	ENST00000445268	CA3	P07451	260 aa		11.34	□□□□□ -0.59
RPE-213	ENST00000445268	POU3F3	P20264	500 aa	Predicted RBP	11.34	□□□□□ -0.59
RPE-213	ENST00000445268	SSTR3	P32745	418 aa	Predicted RBP	11.34	□□□□□ -0.59
RPE-213	ENST00000445268	RFX5	P48382	616 aa	Predicted RBP	11.34	□□□□□ -0.59
RPE-213	ENST00000445268	CCDC102B	Q68D86	513 aa		11.34	□□□□□ -0.59
RPE-213	ENST00000445268	SPRED2	Q7Z698	418 aa		11.34	□□□□□ -0.59
RPE-213	ENST00000445268	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.34	□□□□□ -0.59
RPE-213	ENST00000445268	CDCA7L	Q96GN5	454 aa		11.34	□□□□□ -0.59
RPE-213	ENST00000445268	MTIF3	Q9H2K0	278 aa	Known RBP	11.34	□□□□□ -0.59
RPE-213	ENST00000445268	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.34	□□□□□ -0.59
RPE-213	ENST00000445268	PI4KB	Q9UBF8	816 aa		11.34	□□□□□ -0.59
RPE-213	ENST00000445268	PCDHA11	Q9Y5I1	949 aa		11.34	□□□□□ -0.59
RPE-213	ENST00000445268	ZBBX	A8MT70	800 aa		11.33	□□□□□ -0.6
RPE-213	ENST00000445268	ST18	O60284	1047 aa		11.33	□□□□□ -0.6
RPE-213	ENST00000445268	FGB	P02675	491 aa		11.33	□□□□□ -0.6
RPE-213	ENST00000445268	IL9	P15248	144 aa		11.33	□□□□□ -0.6
RPE-213	ENST00000445268	ERICH6	Q7L0X2	663 aa		11.33	□□□□□ -0.6
RPE-213	ENST00000445268	FAM178B	Q8IXR5	827 aa		11.33	□□□□□ -0.6
RPE-213	ENST00000445268	FAM126B	Q8IXS8	530 aa		11.33	□□□□□ -0.6
RPE-213	ENST00000445268	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	11.33	□□□□□ -0.6
RPE-213	ENST00000445268	ACER1	Q8TDN7	264 aa		11.33	□□□□□ -0.6
RPE-213	ENST00000445268	NUP133	Q8WUM0	1156 aa		11.33	□□□□□ -0.6
RPE-213	ENST00000445268	ARNTL2	Q8WYA1	636 aa		11.33	□□□□□ -0.6
RPE-213	ENST00000445268	SPATC1L	Q9H0A9	340 aa		11.33	□□□□□ -0.6
RPE-213	ENST00000445268	KCNH6	Q9H252	994 aa		11.33	□□□□□ -0.6
RPE-213	ENST00000445268	TRIO	O75962	3097 aa		11.33	□□□□□ -0.6
RPE-213	ENST00000445268	MROH7	Q68CQ1	1323 aa		11.33	□□□□□ -0.6
RPE-213	ENST00000445268	TECTA	O75443	2155 aa		11.33	□□□□□ -0.6
RPE-213	ENST00000445268	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.32	□□□□□ -0.6
RPE-213	ENST00000445268	CCL23	P55773	120 aa		11.32	□□□□□ -0.6
RPE-213	ENST00000445268	KCNA10	Q16322	511 aa		11.32	□□□□□ -0.6
RPE-213	ENST00000445268	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.32	□□□□□ -0.6
RPE-213	ENST00000445268	PI16	Q6UXB8	463 aa		11.32	□□□□□ -0.6
RPE-213	ENST00000445268	HFE2	Q6ZVN8	426 aa		11.32	□□□□□ -0.6
RPE-213	ENST00000445268	MAPKAPK5	Q8IW41	473 aa		11.32	□□□□□ -0.6
RPE-213	ENST00000445268	PRSS33	Q8NF86	280 aa		11.32	□□□□□ -0.6
RPE-213	ENST00000445268	TRIM34	Q9BYJ4	488 aa		11.32	□□□□□ -0.6
RPE-213	ENST00000445268	SLC4A7	Q9Y6M7	1214 aa		11.32	□□□□□ -0.6
RPE-213	ENST00000445268	FLT1	P17948	1338 aa		11.32	□□□□□ -0.6
RPE-213	ENST00000445268	MOXD2P	A6NHM9	499 aa		11.31	□□□□□ -0.6
RPE-213	ENST00000445268	STRN	O43815	780 aa		11.31	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms