RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 PALM3A6NDB9 673 aaPredicted RBP21.68■■□□□ 1.06
SEMA3D-202ENST00000444867 ZNF202O95125 648 aa21.68■■□□□ 1.06
SEMA3D-202ENST00000444867 CALML3P27482 149 aa21.68■■□□□ 1.06
SEMA3D-202ENST00000444867 SCNN1DP51172 638 aa21.68■■□□□ 1.06
SEMA3D-202ENST00000444867 KIAA2012Q0VF49 1180 aa21.68■■□□□ 1.06
SEMA3D-202ENST00000444867 PICALMQ13492 652 aa21.68■■□□□ 1.06
SEMA3D-202ENST00000444867 APOBEC3HQ6NTF7 200 aaKnown RBP21.68■■□□□ 1.06
SEMA3D-202ENST00000444867 CDC42EP5Q6NZY7 148 aa21.68■■□□□ 1.06
SEMA3D-202ENST00000444867 CABP5Q9NP86 173 aa21.68■■□□□ 1.06
SEMA3D-202ENST00000444867 KIF13BQ9NQT8 1826 aa21.67■■□□□ 1.06
SEMA3D-202ENST00000444867 SMARCA1P28370 1054 aa21.67■■□□□ 1.06
SEMA3D-202ENST00000444867 OSBPL5Q9H0X9 879 aaPredicted RBP21.67■■□□□ 1.06
SEMA3D-202ENST00000444867 hCG_1642624A0A1W2PR95 340 aa21.66■■□□□ 1.06
SEMA3D-202ENST00000444867 HLA-DOAP06340 250 aa21.66■■□□□ 1.06
SEMA3D-202ENST00000444867 PTPREP23469 700 aa21.66■■□□□ 1.06
SEMA3D-202ENST00000444867 SHC4Q6S5L8 630 aa21.66■■□□□ 1.06
SEMA3D-202ENST00000444867 ZNF579Q8NAF0 562 aaKnown RBP21.66■■□□□ 1.06
SEMA3D-202ENST00000444867 TNFRSF25Q93038 417 aa21.66■■□□□ 1.06
SEMA3D-202ENST00000444867 CBX8Q9HC52 389 aa21.66■■□□□ 1.06
SEMA3D-202ENST00000444867 DDX4Q9NQI0 724 aaKnown RBP21.66■■□□□ 1.06
SEMA3D-202ENST00000444867 ANO10Q9NW15 660 aa21.66■■□□□ 1.06
SEMA3D-202ENST00000444867 CCDC39Q9UFE4 941 aa21.66■■□□□ 1.06
SEMA3D-202ENST00000444867 USP25Q9UHP3 1055 aa21.66■■□□□ 1.06
SEMA3D-202ENST00000444867 GREB1LQ9C091 1923 aaPredicted RBP21.66■■□□□ 1.06
SEMA3D-202ENST00000444867 TRIM75PA6NK02 468 aa21.66■■□□□ 1.06
SEMA3D-202ENST00000444867 ESPNB1AK53 854 aa21.66■■□□□ 1.06
SEMA3D-202ENST00000444867 NPM3O75607 178 aaKnown RBP21.66■■□□□ 1.06
SEMA3D-202ENST00000444867 SYKP43405 635 aa21.66■■□□□ 1.06
SEMA3D-202ENST00000444867 NLRP5P59047 1200 aa21.66■■□□□ 1.06
SEMA3D-202ENST00000444867 NPY5RQ15761 445 aa21.66■■□□□ 1.06
SEMA3D-202ENST00000444867 EHD4Q9H223 541 aa21.66■■□□□ 1.06
SEMA3D-202ENST00000444867 SERPINB13Q9UIV8 391 aa21.66■■□□□ 1.06
SEMA3D-202ENST00000444867 TRAPPC10P48553 1259 aa21.65■■□□□ 1.06
SEMA3D-202ENST00000444867 ZNF165P49910 485 aa21.65■■□□□ 1.06
SEMA3D-202ENST00000444867 GALNT17Q6IS24 598 aa21.65■■□□□ 1.06
SEMA3D-202ENST00000444867 STAG2Q8N3U4 1231 aa21.65■■□□□ 1.06
SEMA3D-202ENST00000444867 CEP95Q96GE4 821 aa21.65■■□□□ 1.06
SEMA3D-202ENST00000444867 SPZ1Q9BXG8 430 aa21.65■■□□□ 1.06
SEMA3D-202ENST00000444867 ZNF219Q9P2Y4 722 aaPredicted RBP21.65■■□□□ 1.06
SEMA3D-202ENST00000444867 FBXO2Q9UK22 296 aaPredicted RBP21.65■■□□□ 1.06
SEMA3D-202ENST00000444867 SERPINA10Q9UK55 444 aa21.65■■□□□ 1.06
SEMA3D-202ENST00000444867 PCDHB6Q9Y5E3 794 aa21.65■■□□□ 1.06
SEMA3D-202ENST00000444867 SRPRBQ9Y5M8 271 aaKnown RBP21.65■■□□□ 1.06
SEMA3D-202ENST00000444867 ADCY5O95622 1261 aa21.64■■□□□ 1.05
SEMA3D-202ENST00000444867 AOC3Q16853 763 aa21.64■■□□□ 1.05
SEMA3D-202ENST00000444867 PPP4R3BQ5MIZ7 849 aa21.64■■□□□ 1.05
SEMA3D-202ENST00000444867 ELOA2Q8IYF1 753 aaPredicted RBP21.64■■□□□ 1.05
SEMA3D-202ENST00000444867 CCDC148Q8NFR7 591 aa21.64■■□□□ 1.05
SEMA3D-202ENST00000444867 KCNQ5Q9NR82 932 aa21.64■■□□□ 1.05
SEMA3D-202ENST00000444867 KIAA1468Q9P260 1216 aa21.64■■□□□ 1.05
SEMA3D-202ENST00000444867 BAZ2BQ9UIF8 2168 aaKnown RBP21.64■■□□□ 1.05
SEMA3D-202ENST00000444867 IGKV6D-41A0A0C4DH26 115 aa21.63■■□□□ 1.05
SEMA3D-202ENST00000444867 PARP1P09874 1014 aaKnown RBP21.63■■□□□ 1.05
SEMA3D-202ENST00000444867 RTKN2Q8IZC4 609 aa21.63■■□□□ 1.05
SEMA3D-202ENST00000444867 TTLL6Q8N841 843 aa21.63■■□□□ 1.05
SEMA3D-202ENST00000444867 IDI2Q9BXS1 227 aa21.63■■□□□ 1.05
SEMA3D-202ENST00000444867 PDGFDQ9GZP0 370 aaPredicted RBP21.63■■□□□ 1.05
SEMA3D-202ENST00000444867 DNAJC25Q9H1X3 360 aa21.63■■□□□ 1.05
SEMA3D-202ENST00000444867 DHX36Q9H2U1 1008 aaKnown RBP21.63■■□□□ 1.05
SEMA3D-202ENST00000444867 FAM13BQ9NYF5 915 aa21.63■■□□□ 1.05
SEMA3D-202ENST00000444867 CCDC93Q567U6 631 aa21.62■■□□□ 1.05
SEMA3D-202ENST00000444867 ZSCAN30Q86W11 494 aa21.62■■□□□ 1.05
SEMA3D-202ENST00000444867 KIAA0825Q8IV33 1275 aa21.62■■□□□ 1.05
SEMA3D-202ENST00000444867 CLIC6Q96NY7 704 aa21.62■■□□□ 1.05
SEMA3D-202ENST00000444867 MTMR4Q9NYA4 1195 aa21.62■■□□□ 1.05
SEMA3D-202ENST00000444867 SIPA1L1O43166 1804 aa21.62■■□□□ 1.05
SEMA3D-202ENST00000444867 KLRF2D3W0D1 207 aa21.62■■□□□ 1.05
SEMA3D-202ENST00000444867 ZRSR1Q15695 479 aaKnown RBP21.62■■□□□ 1.05
SEMA3D-202ENST00000444867 DAGLBQ8NCG7 672 aa21.62■■□□□ 1.05
SEMA3D-202ENST00000444867 NAT10Q9H0A0 1025 aaKnown RBP21.62■■□□□ 1.05
SEMA3D-202ENST00000444867 KCNH3Q9ULD8 1083 aa21.62■■□□□ 1.05
SEMA3D-202ENST00000444867 PPIP5K2O43314 1243 aa21.61■■□□□ 1.05
SEMA3D-202ENST00000444867 LUZP1Q86V48 1076 aa21.61■■□□□ 1.05
SEMA3D-202ENST00000444867 CEP57L1Q8IYX8 460 aa21.61■■□□□ 1.05
SEMA3D-202ENST00000444867 BLIDQ8IZY5 108 aa21.61■■□□□ 1.05
SEMA3D-202ENST00000444867 FERMT2Q96AC1 680 aa21.61■■□□□ 1.05
SEMA3D-202ENST00000444867 CCDC17Q96LX7 622 aa21.61■■□□□ 1.05
SEMA3D-202ENST00000444867 PSMD1Q99460 953 aa21.61■■□□□ 1.05
SEMA3D-202ENST00000444867 PCDHA4Q9UN74 947 aa21.61■■□□□ 1.05
SEMA3D-202ENST00000444867 CYTH3O43739 400 aa21.6■■□□□ 1.05
SEMA3D-202ENST00000444867 C21orf2O43822 256 aa21.6■■□□□ 1.05
SEMA3D-202ENST00000444867 SHMT1P34896 483 aa21.6■■□□□ 1.05
SEMA3D-202ENST00000444867 EARS2Q5JPH6 523 aaKnown RBP21.6■■□□□ 1.05
SEMA3D-202ENST00000444867 TTC38Q5R3I4 469 aa21.6■■□□□ 1.05
SEMA3D-202ENST00000444867 VPS33BQ9H267 617 aa21.6■■□□□ 1.05
SEMA3D-202ENST00000444867 RRAGDQ9NQL2 400 aaPredicted RBP21.6■■□□□ 1.05
SEMA3D-202ENST00000444867 BARHL2Q9NY43 387 aa21.6■■□□□ 1.05
SEMA3D-202ENST00000444867 MYH4Q9Y623 1939 aa21.6■■□□□ 1.05
SEMA3D-202ENST00000444867 AKR1B1P15121 316 aa21.59■■□□□ 1.05
SEMA3D-202ENST00000444867 IQCB1Q15051 598 aa21.59■■□□□ 1.05
SEMA3D-202ENST00000444867 ASPRV1Q53RT3 343 aa21.59■■□□□ 1.05
SEMA3D-202ENST00000444867 CCDC12Q8WUD4 166 aaPredicted RBP21.59■■□□□ 1.05
SEMA3D-202ENST00000444867 HOOK1Q9UJC3 728 aaKnown RBP21.59■■□□□ 1.05
SEMA3D-202ENST00000444867 COL2A1P02458 1487 aaPredicted RBP21.59■■□□□ 1.05
SEMA3D-202ENST00000444867 FAM205CA6NFA0 338 aa21.58■■□□□ 1.05
SEMA3D-202ENST00000444867 NFIAQ12857 509 aa21.58■■□□□ 1.05
SEMA3D-202ENST00000444867 SLC35G1Q2M3R5 365 aa21.58■■□□□ 1.05
SEMA3D-202ENST00000444867 PIBF1Q8WXW3 757 aa21.58■■□□□ 1.05
SEMA3D-202ENST00000444867 GOLGA6L19H0YKK7 550 aa21.58■■□□□ 1.04
SEMA3D-202ENST00000444867 hCG_1984214I3L0E3 225 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms